Andrew Carroll
acarroll.bsky.social
Andrew Carroll
@acarroll.bsky.social
Product lead Genomics Google Research
Added SPRQ to PacBio training, reducing Indel error on SPRQ by 26%. Added Platinum Pedigree training data for PacBio model, reducing errors by 34% on more extensive Platinum truth. New model and case study for Kinnex/Mas-Seq/Iso-Seq. Additional speed options for GPU pipelines 2/3
December 5, 2024 at 5:57 PM
Release of DeepVariant 1.8. Large speed improvement (~67% faster) via small model for easy sites. New Pangenome-aware option. Reduces error by ~30% for vg-mapped WGS, ~10% for BWA WGS, ~5% BWA exome. New config for custom model users, see release notes.

(github.com/google/deepv...)
December 5, 2024 at 5:57 PM