Yaron Orenstein
yaronorenstein.bsky.social
Yaron Orenstein
@yaronorenstein.bsky.social
Associate Professor in Computer Science and Life Sciences at Bar-Ilan University
Interested in a post-doc in Israel? The deadline for the Azrieli International Postdoctoral Fellowship is November 19. The fellowship offers generous funding for postdocs to conduct research in any academic discipline at eligible Israeli institutions: azrielifoundation.org/fellows/inte...
International Postdoctoral Fellowship - The Azrieli Foundation
The Azrieli Fellows Program is an elite group of academics who cultivate a network of leading professionals in Israel and around the world.
azrielifoundation.org
November 10, 2025 at 8:59 AM
The start of a new academic year at the Orenstein lab - we are excited to welcome three new MSc students: Yehuda, Evyatar, and Sapir, and continue with three PhD students: Ido, Jonathan, and Noam. Good luck in your studies and research!
October 27, 2025 at 5:47 AM
The GreedyMini paper is finally out as part of #ISMBECCB2025 proceedings: academic.oup.com/bioinformati.... Arseny will present it on the last day (July 24th) and last session (14:20) of the HiTSeq meeting.
GreedyMini: generating low-density DNA minimizers
AbstractMotivation. Minimizers are the most popular k-mer selection scheme in algorithms and data structures analyzing high-throughput sequencing (HTS) dat
academic.oup.com
July 16, 2025 at 6:31 AM
🚨 Attention US PhDs in Bioinformatics:

Interested in a postdoc in my group at Bar-Ilan University 🇮🇱 through the Fulbright Israel fellowship (2026–2027)?

🧬 2 years of research
💰 $95,000 stipend + relocation + benefits
📅 Apply by 15/9
🔗 www.fulbright.org.il/program/2/842
✉️ Email me!
Fulbright Postdoctoral Fellowships at Bar-Ilan University | Fulbright
www.fulbright.org.il
July 7, 2025 at 7:14 AM
It was a delight to host my former PhD advisor Prof. Ron Shamir and hear about his current research on clustering cancer patients and standardising Parkinson's disease progression scores (in addition to the usual chit-chatting and updates...)
May 22, 2025 at 2:08 PM
Reposted by Yaron Orenstein
🚨 Deadline Extended: Call for Papers - RECOMB-seq 2025 🚨

Great news! You now have an extra week to submit your work. 🎉

Updated Deadlines:
🔹 Abstract Registration: Jan 31, 2025
🔹 Submission: Feb 7, 2025

recomb-seq.github.io/papers/
Call for Papers
RECOMB-seq is the RECOMB Satellite Conference on Biological Sequence Analysis
recomb-seq.github.io
January 23, 2025 at 8:12 AM
Reposted by Yaron Orenstein
🚨 Call for Papers: RECOMB-seq 2025 🚨

🗓️ Dates: April 24-25, 2025

📍 Location: Seoul, South Korea

Key deadlines:
🔹 Abstract registration: Jan 24, 2025
🔹 Submission: Jan 31, 2025

More details: recomb-seq.github.io/papers/
Call for Papers
RECOMB-seq is the RECOMB Satellite Conference on Biological Sequence Analysis
recomb-seq.github.io
December 11, 2024 at 11:18 AM
Excited to share FiSSC, a new method to find a smallest sequence cover of sets of degenerate reads. We prove that the problem is NP-hard, and suggest filtering steps and an ILP solution. We apply it to RNA A-to-I editing data to gauge biological complexity
dl.acm.org/doi/10.1145/...
FiSSC: Finding smallest sequence covers to sets of degenerate reads with applications to RNA editing | Proceedings of the 15th ACM International Conference on Bioinformatics, Computational Biology and...
dl.acm.org
December 18, 2024 at 8:32 PM