John P Grogan
johnpgrogan1.bsky.social
John P Grogan
@johnpgrogan1.bsky.social
Cognitive neuroscience postdoc at Trinity College Dublin, developing models of neural activity during decision making. @JohnPGrogan@mastodon.world. @JohnPGrogan1 on twitter
Reposted by John P Grogan
Newly released Stockholm Declaration recommends the following reforms to publishing:

1. Academia resumes control of publishing

2. Incentive systems to merit quality, not quantity

3. Independent fraud detection and prevention

4. Legislation and policies to protect science quality and integrity
Reformation of science publishing: the Stockholm Declaration | Royal Society Open Science
Science relies on integrity and trustworthiness. But scientists under career pressure are lured to purchase fake publications from ‘paper mills’ that use AI-generated data, text and image fabrication....
royalsocietypublishing.org
November 5, 2025 at 7:07 PM
Reposted by John P Grogan
The current environment is making it near impossible to run clinical trials in the UK.
One key issue discussed in @brain1878.bsky.social
is the duplication - or worse - of regulatory oversight at NHS hospitals & universities.

My views on how to change the system
academic.oup.com/brain/articl...
October 6, 2025 at 6:07 AM
Reposted by John P Grogan
Check out our reviewed preprint, now out in eLife!
With @spk3lly.bsky.social, @redmondoconnell.bsky.social and Anna Geuzebroek

elifesciences.org/reviewed-pre...

While we work on improving the [solid] paper based on the reviews, here are the key take-home messages:
Perceptual glimpses are locally accumulated and globally maintained at distinct processing levels
elifesciences.org
September 26, 2025 at 6:24 PM
Reposted by John P Grogan
"Learning to be confident: How agents learn confidence based on prediction errors"! Now out in @cognitionjournal.bsky.social led by @pierreledenmat.bsky.social

Paper: desenderlab.com/wp-content/u... Thread ↓↓↓

#AcademicSky #PsychSciSky #Neuroscience #Neuroskyence
September 25, 2025 at 8:44 AM
Reposted by John P Grogan
Introducing hMFC: A Bayesian hierarchical model of trial-to-trial fluctuations in decision criterion! Now out in @plos.org Comp Bio.
led by Robin Vloeberghs with @anne-urai.bsky.social Scott Linderman

Paper: desenderlab.com/wp-content/u... Thread ↓↓↓

#PsychSciSky #Neuroscience #Neuroskyence
September 25, 2025 at 9:13 AM
Reposted by John P Grogan
does someone good at coding & analysis want to work remotely w/ us in the coming few months (before end of 2025), as a paid consultant? project will be on neurofeedback (fMRI, ECoG, calcium imaging). we'll work towards developing the experiments & analysis pipelines together. if so pls DM me ur CV🧠📈
September 1, 2025 at 1:06 PM
Our newest preprint is out (doi.org/10.1101/2025.06.05.658071), with @lucvermeylen.bsky.social,Dasha Monakhovych, Cameron McCabe, Sarah-Louise Mannion, @kobedesender.bsky.social, @redmondoconnell.bsky.social, comparing post-decision confidence models against behaviour and neural decision signals...
Neurally-informed modelling unravels a single evidence accumulation process for choices and subsequent confidence reports
Subjective confidence in perceptual choices depends on computations occurring prior to and after choice commitment. However, the nature of these computations remains unclear. Current models disagree o...
doi.org
June 10, 2025 at 10:23 AM
Reposted by John P Grogan
Led by postdoc Doyeon Lee and grad student Joseph Pruitt, our lab has a new Perspectives piece in PNAS Nexus:

"Metacognitive sensitivity: The key to calibrating trust and optimal decision-making with AI"

academic.oup.com/pnasnexus/ar...

With co-authors Tianyu Zhou and Eric Du 1/
Metacognitive sensitivity: The key to calibrating trust and optimal decision making with AI
Abstract. Knowing when to trust and incorporate the advice from artificially intelligent (AI) systems is of increasing importance in the modern world. Rese
academic.oup.com
May 27, 2025 at 2:27 PM
Reposted by John P Grogan
Very happy to share this paper, now published in
@natcomms.nature.com! nature.com/articles/s41...
With @spk3lly.bsky.social and @neuromurphy.bsky.social, we investigated the neural computations that allow us to make near-optimal decisions in changing environments. Here's a short summary:
Dissociable encoding of evolving beliefs and momentary belief updates in distinct neural decision signals - Nature Communications
People are capable of making near-optimal decisions in volatile, changing environments. Here, the authors show how two neural decision signals encode distinct aspects of the belief updating process un...
nature.com
April 28, 2025 at 8:33 AM
Reposted by John P Grogan
1. LLM-generated code tries to run code from online software packages. Which is normal but
2. The packages don’t exist. Which would normally cause an error but
3. Nefarious people have made malware under the package names that LLMs make up most often. So
4. Now the LLM code points to malware.
LLMs hallucinating nonexistent software packages with plausible names leads to a new malware vulnerability: "slopsquatting."
LLMs can't stop making up software dependencies and sabotaging everything
: Hallucinated package names fuel 'slopsquatting'
www.theregister.com
April 12, 2025 at 11:43 PM
Reposted by John P Grogan
PhD position in cognitive computational neuroscience! Join us, & investigate how we can endow domain-specific models of vision (eg DNNs) with domain-general processes such as metacognition or working memory.
All details => www.kuleuven.be/personeel/jo...
#PsychSciSky #Neuroscience #Neuroskyence
PhD position in cognitive computational neuroscience
PhD position in cognitive computational neuroscience
www.kuleuven.be
March 19, 2025 at 3:31 PM
Reposted by John P Grogan
Why academia is sleepwalking into self-destruction. My editorial @brain1878.bsky.social If you agree with the sentiments please repost. It's important for all our sakes to stop the madness
academic.oup.com/brain/articl...
March 6, 2025 at 7:16 PM
Reposted by John P Grogan
Ever wondered how basketball players know when their throws are in/out?
L. Brun & @perrineporte.bsky.social asked players to rate confidence in their throws under variable visual feedback.
Turns out vision helps adjust confidence in successful, but not failed throws:
papers.ssrn.com/sol3/papers....
The Role of Visual Feedback in Metacognitive Judgments of Motor Performance
Predicting the outcome of one’s actions is crucial for effective behaviour. The mechanical underpinnings of this metacognitive ability are, however, poorly unde
papers.ssrn.com
January 31, 2025 at 11:17 AM
Reposted by John P Grogan
🚨New Pre-print is out!

What causes the drift rate to vary across trials? How much does the drift rate variability estimate in the Diffusion Decision Model reflect the true variability? Here, we critically examined this by including trial-level regressors of drift rate.

osf.io/preprints/ps...
OSF
osf.io
January 25, 2025 at 2:00 AM
Reposted by John P Grogan
How is confidence related to confidence RTs? @stefherregods.bsky.social @lucvermeylen.bsky.social and I showcase how our recent EAM of confidence accounts for various relationships observed in empirical data.

link: pmc.ncbi.nlm.nih.gov/articles/PMC...
#PsychSciSky #Neuroscience #Neuroskyence
November 22, 2024 at 10:43 AM
Pleased that our work from my previous postdoc with Sanjay Manohar is finally published!
Muscarinic antagonism reduces motivation & invigoration in humans, mediated by changes in preparatory EEG signals: doi.org/10.7554/eLif...
Muscarinic receptors mediate motivation via preparatory neural activity in humans
Muscarinic antagonism is causally involved in motivation and incentivisation in healthy human participants, partially mediated via preparatory neural signatures, with implications for cholinergic trea...
doi.org
November 21, 2024 at 10:46 AM