Jochen Schwenk
@jochwenk.bsky.social
Professor of Translational Proteomics - Curious about 🩸proteins and proteomics. SciLifeLab, KTH Royal Institute of Technology and Human Protein Atlas.
Reposted by Jochen Schwenk
Finally, someone has solved a real problem with AI! No more having to take a paper in the format for a journal that rejected you, and reformat it for a new journal. Well done!! formatmypaper.com
October 15, 2025 at 6:33 AM
Finally, someone has solved a real problem with AI! No more having to take a paper in the format for a journal that rejected you, and reformat it for a new journal. Well done!! formatmypaper.com
🚨 A new open-access resource of @proteinatlas.bsky.social
A human pan-disease🩸 atlas of the circulating proteome
👉 www.proteinatlas.org/humanproteom...
📖 www.science.org/doi/10.1126/...
🤩 @buenoalvez.bsky.social and many more!
@kawresearch.bsky.social
@scilifelab.se
@kthuniversity.bsky.social
A human pan-disease🩸 atlas of the circulating proteome
👉 www.proteinatlas.org/humanproteom...
📖 www.science.org/doi/10.1126/...
🤩 @buenoalvez.bsky.social and many more!
@kawresearch.bsky.social
@scilifelab.se
@kthuniversity.bsky.social
October 9, 2025 at 7:19 PM
🚨 A new open-access resource of @proteinatlas.bsky.social
A human pan-disease🩸 atlas of the circulating proteome
👉 www.proteinatlas.org/humanproteom...
📖 www.science.org/doi/10.1126/...
🤩 @buenoalvez.bsky.social and many more!
@kawresearch.bsky.social
@scilifelab.se
@kthuniversity.bsky.social
A human pan-disease🩸 atlas of the circulating proteome
👉 www.proteinatlas.org/humanproteom...
📖 www.science.org/doi/10.1126/...
🤩 @buenoalvez.bsky.social and many more!
@kawresearch.bsky.social
@scilifelab.se
@kthuniversity.bsky.social
Current landscape of plasma proteomics from technical innovations to biological insights and biomarker discovery - probably the currently most comprehensive comparison of plasma proteomics platforms!
Congrats to Sara and her team!
www.nature.com/articles/s42...
Congrats to Sara and her team!
www.nature.com/articles/s42...
Current landscape of plasma proteomics from technical innovations to biological insights and biomarker discovery - Communications Chemistry
Plasma proteome profiling has surged as a promising avenue for biomarker discovery, yet comprehensive platform comparisons remain scarce. Here, the authors evaluate eight proteomics platforms, revealing key differences and complementary strengths, providing crucial insights for researchers into coverage trade-offs and implicating biomarker discovery and clinical applications.
www.nature.com
September 25, 2025 at 5:40 PM
Current landscape of plasma proteomics from technical innovations to biological insights and biomarker discovery - probably the currently most comprehensive comparison of plasma proteomics platforms!
Congrats to Sara and her team!
www.nature.com/articles/s42...
Congrats to Sara and her team!
www.nature.com/articles/s42...
🚨 Exciting to share our recent global team effort on "A standardized framework for circulating blood proteomics" that just came out in Nature Genetics: rdcu.be/eHK4v.
A standardized framework for circulating blood proteomics
Nature Genetics - The field of blood proteomics faces an upsurge of data with the challenge of cross-study comparisons. This Perspective offers an in-depth analysis and proposes reference materials...
rdcu.be
September 23, 2025 at 10:46 AM
🚨 Exciting to share our recent global team effort on "A standardized framework for circulating blood proteomics" that just came out in Nature Genetics: rdcu.be/eHK4v.
Metformin treatment affects the circulating proteome (such as GDF15) in persons with and without diabetes.
Great outcome of a close collaboration of the IMI-DIRECT, IMI-RHAPSODY and SCAPIS-Wellness consortia, studying multiple cohorts by advanced proteomics.
www.sciencedirect.com/science/arti...
Great outcome of a close collaboration of the IMI-DIRECT, IMI-RHAPSODY and SCAPIS-Wellness consortia, studying multiple cohorts by advanced proteomics.
www.sciencedirect.com/science/arti...
The influence of metformin treatment on the circulating proteome
Metformin is one of the most used drugs worldwide. Given the increasing use of proteomics in trials, bioresources, and clinics, it is crucial to under…
www.sciencedirect.com
August 5, 2025 at 11:46 AM
Metformin treatment affects the circulating proteome (such as GDF15) in persons with and without diabetes.
Great outcome of a close collaboration of the IMI-DIRECT, IMI-RHAPSODY and SCAPIS-Wellness consortia, studying multiple cohorts by advanced proteomics.
www.sciencedirect.com/science/arti...
Great outcome of a close collaboration of the IMI-DIRECT, IMI-RHAPSODY and SCAPIS-Wellness consortia, studying multiple cohorts by advanced proteomics.
www.sciencedirect.com/science/arti...
Are you curious about blood microsampling to monitor changes in the circulating proteome?
Then check our team science study recently published in @diabetologiajnl.bsky.social where we study the effects of virus induced immune response and disease onset.
link.springer.com/article/10.1...
Then check our team science study recently published in @diabetologiajnl.bsky.social where we study the effects of virus induced immune response and disease onset.
link.springer.com/article/10.1...
Frequent longitudinal blood microsampling and proteome monitoring identify disease markers and enable timely intervention in a mouse model of type 1 diabetes - Diabetologia
Aims/hypothesis Type 1 diabetes manifests after irreversible beta cell damage, highlighting the crucial need for markers of the presymptomatic phase to enable early and effective interventions. Curren...
link.springer.com
August 5, 2025 at 7:47 AM
Are you curious about blood microsampling to monitor changes in the circulating proteome?
Then check our team science study recently published in @diabetologiajnl.bsky.social where we study the effects of virus induced immune response and disease onset.
link.springer.com/article/10.1...
Then check our team science study recently published in @diabetologiajnl.bsky.social where we study the effects of virus induced immune response and disease onset.
link.springer.com/article/10.1...
🚨Industry PhD position on advanced (proteo)omics data-driven analyses to study the molecular effects of #medication with #Pfizer.
Apply 👉 www.pfizer.com/about/career... to join the SciLifeLab & Wallenberg National Program for Data-Driven Life Science.
@scilifelab.se @kthuniversity.bsky.social
Apply 👉 www.pfizer.com/about/career... to join the SciLifeLab & Wallenberg National Program for Data-Driven Life Science.
@scilifelab.se @kthuniversity.bsky.social
Job Details Page | Pfizer
www.pfizer.com
July 14, 2025 at 9:20 PM
🚨Industry PhD position on advanced (proteo)omics data-driven analyses to study the molecular effects of #medication with #Pfizer.
Apply 👉 www.pfizer.com/about/career... to join the SciLifeLab & Wallenberg National Program for Data-Driven Life Science.
@scilifelab.se @kthuniversity.bsky.social
Apply 👉 www.pfizer.com/about/career... to join the SciLifeLab & Wallenberg National Program for Data-Driven Life Science.
@scilifelab.se @kthuniversity.bsky.social
Reposted by Jochen Schwenk
Explore our new preprint featuring novel data generated on the Nautilus Proteome Analysis Platform! The preprint covers how we use Iterative Mapping to quantify tau proteoforms at the single-molecule level:
www.biorxiv.org/content/10.1...
#Proteomics #Neuroscience #Proteoforms #AlzheimersDisease
www.biorxiv.org/content/10.1...
#Proteomics #Neuroscience #Proteoforms #AlzheimersDisease
June 30, 2025 at 2:39 PM
Explore our new preprint featuring novel data generated on the Nautilus Proteome Analysis Platform! The preprint covers how we use Iterative Mapping to quantify tau proteoforms at the single-molecule level:
www.biorxiv.org/content/10.1...
#Proteomics #Neuroscience #Proteoforms #AlzheimersDisease
www.biorxiv.org/content/10.1...
#Proteomics #Neuroscience #Proteoforms #AlzheimersDisease
Congratulations Dr Vincent from the @mannlab.bsky.social 🎓
June 24, 2025 at 4:47 PM
Congratulations Dr Vincent from the @mannlab.bsky.social 🎓
Reposted by Jochen Schwenk
Epitope Effect Prevalence in Affinity-based pQTL studies https://www.biorxiv.org/content/10.1101/2025.06.20.660695v1
June 24, 2025 at 8:33 AM
Epitope Effect Prevalence in Affinity-based pQTL studies https://www.biorxiv.org/content/10.1101/2025.06.20.660695v1
Reposted by Jochen Schwenk
Illumina picks up proteomics developer SomaLogic from Standard BioTools for $425M | www.fiercebiotech.co...
---
#proteomics #prot-article
---
#proteomics #prot-article
June 23, 2025 at 4:00 PM
Illumina picks up proteomics developer SomaLogic from Standard BioTools for $425M | www.fiercebiotech.co...
---
#proteomics #prot-article
---
#proteomics #prot-article
Back from #EUPA2025 in a Saint Malo and am so impressed by the ECR talks, and so happy we gave them to opportunity to be on stage and shine ✨! Keep up the great work! You are the future of #proteomics…
Also thanks to my excellent session co-chair @maurinefucito.bsky.social for making this fun!
Also thanks to my excellent session co-chair @maurinefucito.bsky.social for making this fun!
June 19, 2025 at 11:26 AM
Back from #EUPA2025 in a Saint Malo and am so impressed by the ECR talks, and so happy we gave them to opportunity to be on stage and shine ✨! Keep up the great work! You are the future of #proteomics…
Also thanks to my excellent session co-chair @maurinefucito.bsky.social for making this fun!
Also thanks to my excellent session co-chair @maurinefucito.bsky.social for making this fun!
Great outcome of a wonderful collaboration with @erikmelen.bsky.social and team!
A very thoughtful approach to the biomarker challenge!
A very thoughtful approach to the biomarker challenge!
MMP-10 as a new biomarker for Type 2 inflammation in asthma? Surely promising. Please have a look at our recent Allergy paper! @jochwenk.bsky.social onlinelibrary.wiley.com/doi/10.1111/...
Genetically Determined Inflammation‐Related Proteins in Asthma and Type‐2 Signatures
This study investigates the association between genetic variation and inflammation-related plasma proteins, and the differences in the proteins genetically determined between subjects with type-2 ...
onlinelibrary.wiley.com
June 13, 2025 at 9:27 AM
Great outcome of a wonderful collaboration with @erikmelen.bsky.social and team!
A very thoughtful approach to the biomarker challenge!
A very thoughtful approach to the biomarker challenge!
Looking forward to a Sunday on #genetics at #ESHG2025 and inspire to try #proteomics - @scilifelab.se #HumanProteinAtlas @kthuniversity.bsky.social
May 25, 2025 at 9:41 AM
Looking forward to a Sunday on #genetics at #ESHG2025 and inspire to try #proteomics - @scilifelab.se #HumanProteinAtlas @kthuniversity.bsky.social
Reposted by Jochen Schwenk
Another great #pQTL study, which, and among many things, expands the utility of dried blood spot #proteomics into #GWAS analyses. More to come…
Newborns at high risk #T1D colocalization of pQTLs for CTRB1, APOBR, IL7R, CPA1, and PNLIPRP1 with Type 1 diabetes GWAS signals, with Mendelian randomization causally implicates each of these proteins in the aetiology of Type 1 #diabetes @natcomms.nature.com www.nature.com/articles/s41...
Genetics of circulating proteins in newborn babies at high risk of type 1 diabetes - Nature Communications
Early detection of type 1 diabetes can facilitate early intervention. Here, the authors present a pQTL map in newborns and integrate it with genetic data to identifiy proteins that may play a causal r...
www.nature.com
April 22, 2025 at 11:53 AM
Another great #pQTL study, which, and among many things, expands the utility of dried blood spot #proteomics into #GWAS analyses. More to come…
Reposted by Jochen Schwenk
Spread the news! Grants available to recruit scientists from outside of Europe to Sweden 🇸🇪 🧠
Please re-post.
Please re-post.
New grant for recruiting researchers active outside Europe
In mid-April, the Swedish Research Council will issue a call for grants of 2 million SEK to enable Swedish higher education institutions and other research organisations to recruit prominent researche...
www.vr.se
April 3, 2025 at 6:00 PM
Spread the news! Grants available to recruit scientists from outside of Europe to Sweden 🇸🇪 🧠
Please re-post.
Please re-post.
A change of perspective expands your horizon - exciting two (and hopefully more) years ahead of working more closely with @erikmelen.bsky.social and team at Sachsska Children's and Youth #Hospital on implementing #proteomics into #clinical research and decision making! @kthuniversity.bsky.social
March 28, 2025 at 2:30 PM
A change of perspective expands your horizon - exciting two (and hopefully more) years ahead of working more closely with @erikmelen.bsky.social and team at Sachsska Children's and Youth #Hospital on implementing #proteomics into #clinical research and decision making! @kthuniversity.bsky.social
Reposted by Jochen Schwenk
As my first post on @bsky.app I am happy to share our paper in Nature Reviews Genetics on how biobanking coupling genetic data with phenotypes at scale shapes precision medicine and global health go.nature.com/3AS54C0. Grateful to Scott Gallagher and Anji Musick for the All of Us Research Program.
Biobanking with genetics shapes precision medicine and global health - Nature Reviews Genetics
Biobanks help centralize specimen collections, store and disseminate data, and facilitate large-scale analyses. This Review discusses how biobanks facilitate genetics research towards advancing precis...
go.nature.com
November 24, 2024 at 1:02 PM
As my first post on @bsky.app I am happy to share our paper in Nature Reviews Genetics on how biobanking coupling genetic data with phenotypes at scale shapes precision medicine and global health go.nature.com/3AS54C0. Grateful to Scott Gallagher and Anji Musick for the All of Us Research Program.
Reposted by Jochen Schwenk
Out today in Nature Genetics: Using MS-based proteomics, we mapped 1,200+ plasma proteins in 2,100+ children, showing how genetics & development shape blood protein levels during childhood.
nature.com/articles/s41588-025-02089-2
#PediatricProteomics #pQTL
First author @liliniu.bsky.social explains ⬇️
nature.com/articles/s41588-025-02089-2
#PediatricProteomics #pQTL
First author @liliniu.bsky.social explains ⬇️
Plasma proteome variation and its genetic determinants in children and adolescents - Nature Genetics
This mass spectrometry-based proteomic study profiles the plasma proteome in 2,147 children and adolescents and reveals its association with age, sex, puberty, body mass index and genetics.
nature.com
February 19, 2025 at 10:44 AM
Out today in Nature Genetics: Using MS-based proteomics, we mapped 1,200+ plasma proteins in 2,100+ children, showing how genetics & development shape blood protein levels during childhood.
nature.com/articles/s41588-025-02089-2
#PediatricProteomics #pQTL
First author @liliniu.bsky.social explains ⬇️
nature.com/articles/s41588-025-02089-2
#PediatricProteomics #pQTL
First author @liliniu.bsky.social explains ⬇️
The German language can explain complex events in one word. Today's contribution is "Klebefehler" or "sticking error": The slight misplacement of a tape strip or glue that, upon removal, will irreversibly damage the material you are trying to fix, leaving the task unfinished.
February 19, 2025 at 9:34 AM
The German language can explain complex events in one word. Today's contribution is "Klebefehler" or "sticking error": The slight misplacement of a tape strip or glue that, upon removal, will irreversibly damage the material you are trying to fix, leaving the task unfinished.
Reposted by Jochen Schwenk
my thoughts on the destructive chaos targeting university research right now. Btw I've left @forbes and moved to @SubstackInc, where all my content is free: stevensalzberg.substack.com/p/the-pointl...
The pointless destruction of the world's leading scientific and medical research system
No one benefits from this
stevensalzberg.substack.com
February 16, 2025 at 4:00 PM
my thoughts on the destructive chaos targeting university research right now. Btw I've left @forbes and moved to @SubstackInc, where all my content is free: stevensalzberg.substack.com/p/the-pointl...
Here’s a recent interview in GenomeWeb about our DBS study using Olink and Alamar. www.genomeweb.com/proteomics-p...?
Swedish Team Uses High-Plex Affinity Assays for Proteomic Analysis of Dried Blood Spots
The effort raises the possibility of combing high-plex proteomics with remote sampling for more nimble and flexible approaches to population-scale studies.
www.genomeweb.com
February 13, 2025 at 9:42 PM
Here’s a recent interview in GenomeWeb about our DBS study using Olink and Alamar. www.genomeweb.com/proteomics-p...?
Reposted by Jochen Schwenk
Comparative Analysis Between Olink‐PEA and Alamar‐NULISA Proteomic Technologies Applied to a Critically Ill COVID‐19 Cohort analyticalsciencejou...
---
#proteomics #prot-paper
---
#proteomics #prot-paper
February 11, 2025 at 10:20 AM
Comparative Analysis Between Olink‐PEA and Alamar‐NULISA Proteomic Technologies Applied to a Critically Ill COVID‐19 Cohort analyticalsciencejou...
---
#proteomics #prot-paper
---
#proteomics #prot-paper