James Gurney
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jamesgurney.bsky.social
James Gurney
@jamesgurney.bsky.social
Assistant professor working on phage. Occasional writer/fact checker for kurzgesagt. I didn’t write dinotopia.
Reposted by James Gurney
Friends, please help spread the word about our microbiology REU program at Montana State University.
www.montana.edu/mbi/reu/

Each student receives a stipend ($7000 for 10 wks). Travel compensation, room, and board are also provided.

Details in the attached pic--Feb 14 deadline
🧫🧪🦠#microsky
January 28, 2026 at 7:46 PM
Phage folks who use the wizard DNA clean up kit to extract Phage DNA, I understand how the silica can hold onto DNA, how does the kit open up the phage in the first place? Mechanical stress from the 10µm silica beads in the resin? Or does the guanidinium thiocyanate do the job?
January 19, 2026 at 4:24 PM
Reposted by James Gurney
JOB ALERT! 📢 For the scientists who love science communication: we’re hiring at @kurzgesagt.org !🌍 Come join our team, the vibes are impeccable.

✍️ Scriptwriter (Remote) kurzgesagt.org/careers/scri...
🔍 Fact-Checker & Researcher (Munich/Berlin/Remote) kurzgesagt.org/careers/seni...
Job listing for (Senior) Fact-Checker & Researcher (all genders) | kurzgesagt
Want to work with kurzgesagt? We have an open role as (Senior) Fact-Checker & Researcher (all genders). Apply now to become part of a great team and start an exciting career!
kurzgesagt.org
January 7, 2026 at 12:37 PM
I also didn’t write this book.
December 26, 2025 at 11:10 AM
Proof that even as a child I had bags under my eyes.
December 24, 2025 at 4:29 PM
In Wales for Christmas. That means pictures of my parent’s gigantic dog where I try to depict her scale.
December 23, 2025 at 6:31 PM
Reposted by James Gurney
So incredibly proud of this work, and thankful to everyone who makes it possible!
Pittsburgh Phage Program — 2025 Wrapped!

To our patients, clinicians, researches,
regulators, and partners— this work doesn’t happen without you. We screened, treated, delivered, learned—and even laid the groundwork for a 2026 trial!
#pittsburghphageprogram #phagetherapy #P3
December 23, 2025 at 5:57 PM
Reposted by James Gurney
We combined whole tissue clearing with HCR-mRNA FISH imaging to differentiate and visualize different PAO1 variants in mouse lungs infected with mixed populations.
December 16, 2025 at 2:55 PM
Reposted by James Gurney
Recent work from the lab showing how presence of O-antigen deficient Pseudomonas variants change aggregate assembly and microbiogeography of infection

journals.asm.org/doi/10.1128/...
Whole-tissue imaging reveals intrastrain diversity shapes the spatial organization of Pseudomonas aeruginosa in a murine infection model | mSphere
Intrastrain genetic and phenotypic diversity within Pseudomonas aeruginosa populations is common in chronic pulmonary infections. While this intrastrain heterogeneity is a hallmark of chronic infection, its consequences for the spatial organization of P. aeruginosa within the airways remain unclear. Here, we demonstrate that the loss of O-specific antigen in a subpopulation of P. aeruginosa significantly alters the spatial architecture of P. aeruginosa, without changing the total population size or composition. Using a combination of tissue clearing and hybridization chain reaction RNA-FISH in a murine lung infection model, we mapped the localization of genetically distinct P. aeruginosa variants in mixed populations in vivo. These findings reveal that genetic diversification within a strain can reshape the infection landscape at the micron scale, highlighting the overlooked role of intrastrain dynamics in shaping the microbiogeography of infections and influencing host-pathogen interactions.
journals.asm.org
December 16, 2025 at 2:18 PM
November 30, 2025 at 5:20 PM
Interesting, if anyone has other suggestions on ways to poison AIs to reduce student cheating I'm all ears!
posit.co Posit @posit.co · Nov 19
Introducing bluffbench, a new tool to evaluate how well LLMs actually see data plots.

When we trick LLMs with secret #RStats transformations, they can miss the visual contradiction.

bluffbench helps us measure this "blind spot" in AI coding agents. Learn more: posit.co/blog/introdu...
When plotting, LLMs see what they expect to see - Posit
Data science agents need to accurately read plots even when the content contradicts their expectations. Our testing shows today's LLMs still struggle here.
posit.co
November 19, 2025 at 6:49 PM
Reposted by James Gurney
PhD opportunity in my lab: exploring how commensals and pathogens build biofilm communities on endotracheal (ventilator) tubes. Microbial ecology, medical microbiology and fancy imaging! Co-supervised with the fabulous Saskia Bakker and Jeremy Webb warwick.ac.uk/fac/cross_fa... #MicroSky
Dr Freya Harrison
Dr Freya Harrison
warwick.ac.uk
October 15, 2025 at 8:09 PM
Reposted by James Gurney
Interested in doing a PhD in phage biology? See below a super cool project on megaphage ecology and evolution available at the University of Jyväskylä (FIN) in Elina Laanto's lab (Project no. 4). Co-supervision provided by yours truly.
🚀 PhD opportunity

The Dept of Biological and Environmental Science, University of Jyväskylä, is recruiting 1–4 new PhD candidates.

One of the positions is potentially in my lab, focusing on megaphages and their hosts.

Details and apply here 👇
bit.ly/48eqYNB

#phage
Doctoral Researcher positions, Biological and Environmental Sciences
The Department of Biological and Environmental Sciences is seeking applicants for 1–4 fully funded doctoral researcher positions. The positions will begin on August 1, 2026, or as agreed, for a maximu...
ats.talentadore.com
November 14, 2025 at 9:47 AM
Reposted by James Gurney
I made a phage… I think it’s in LB
November 11, 2025 at 10:50 PM
Reposted by James Gurney
Such a Friday, double win at Biology Department with Bio for Breakfast and Research day @jamesgurney.bsky.social @persisterbritt.bsky.social @kswetzel1.bsky.social
November 7, 2025 at 11:54 PM
My lab is gonna make the switch to from dplyr to genzplyr right away.

hadley.github.io/genzplyr/
dplyr but make it bussin fr fr no cap
`genzplyr` is an alternative syntax for `dplyr` that replaces boring old function names with GenZ slang. Your data wrangling is about to hit different.
hadley.github.io
November 7, 2025 at 11:55 AM
Reposted by James Gurney
Do you want to do a Masters in Evolutionary Biology? The call for applying to the MEME program is now open! MEME is a fantastic 2-year MSc between four European Universities on all areas of Evolutionary Biology. Apply and study in Sweden/France/the Netherlands/Germany/USA/Switzerland! www.evobio.eu
October 24, 2025 at 9:04 AM
A few months ago, myself @sallylepage.bsky.social and @dhewlett.bsky.social sat down and recorded a pilot podcast for Kurzgesagt interviewing Cancer expert @kimberly-luddy.bsky.social about all things Cancer. While the project is no more, I thought I'd share it! youtu.be/ZXo6uTf3Im8
Trust Us, we're Liars -Pilot Podcast
YouTube video by The League of Nerds
youtu.be
October 21, 2025 at 2:44 AM
Household energy after submitting grant this week.
October 5, 2025 at 12:36 AM
Reposted by James Gurney
Come and work with me and @ariannebabina.bsky.social on #Streptomyces evolution and antibiotic production

Origins of a tangled bank: Adaptation and evolution in antibiotic-producing Streptomyces

www.gla.ac.uk/postgraduate...

please repost
University of Glasgow - Postgraduate study - Centres for Doctoral Training - NorthWest Biosciences - Our Projects - Underpinning Bioscience - Paul A Hoskisson
www.gla.ac.uk
September 30, 2025 at 11:02 AM
Reposted by James Gurney
PhD fellowship in biofilm-phage interactions - with Mette Burmølle at University of Copenhagen 🇩🇰
deadline 1 October 2025

employment.ku.dk/faculty?show...

#phagesky #microsky
PhD fellowship in biofilm-phage interactions
employment.ku.dk
September 28, 2025 at 2:26 PM
Reposted by James Gurney
Come join us in Knoxville! 🧫🧪🦠
We’re hiring a tenure-track Assistant Professor in Microbial Drivers of Chronic Disease, starting Fall 2026!
September 17, 2025 at 8:00 PM
Reposted by James Gurney
Recent paper from the lab studying predictors of phage cocktail efficacy against complex clinical Pseudomonas populations

royalsocietypublishing.org/doi/epdf/10....

Led by Rosanna Wright with extraordinary MSc (PhD) student Maisie Czernuska
Bacteria–phage infection network structure and genomic defence system content predict efficacy of a phage therapy cocktail against Pseudomonas aeruginosa from chronic lung infections
royalsocietypublishing.org
September 25, 2025 at 1:55 PM