Jacques Izard
@jacquesizard.bsky.social
Oral and gastrointestinal #microbiome #metabolome studies. Topics include relationship to diet and wellness ( #IBD / #cancer / #ostomy/ #ShortBowel syndrome) views are my own.
When you wear multiple hats, content designer, editor, and writer. Thank you to all contributors and the publisher @Elsevier.
#WritingCommunity #readingcommunity #booksky #editor
shop.elsevier.com/books/metage...
#WritingCommunity #readingcommunity #booksky #editor
shop.elsevier.com/books/metage...
Metagenomics for Microbiology
Metagenomics for Microbiology, Second Edition unveils the intricate and diverse world of microbial communities, emphasizing their critical roles in he
shop.elsevier.com
September 29, 2025 at 4:23 PM
When you wear multiple hats, content designer, editor, and writer. Thank you to all contributors and the publisher @Elsevier.
#WritingCommunity #readingcommunity #booksky #editor
shop.elsevier.com/books/metage...
#WritingCommunity #readingcommunity #booksky #editor
shop.elsevier.com/books/metage...
Reposted by Jacques Izard
@dportik.bsky.social and I wrote a book chapter on highly accurate #longread @pacbio.bsky.social HiFi sequencing for #microbiome and #metagenomic applications in "Metagenomics for Microbiology (Second Edition)" that is now published! Check it out here:
www.sciencedirect.com/science/arti...
www.sciencedirect.com/science/arti...
www.sciencedirect.com
August 18, 2025 at 3:15 PM
@dportik.bsky.social and I wrote a book chapter on highly accurate #longread @pacbio.bsky.social HiFi sequencing for #microbiome and #metagenomic applications in "Metagenomics for Microbiology (Second Edition)" that is now published! Check it out here:
www.sciencedirect.com/science/arti...
www.sciencedirect.com/science/arti...
Metagenomics for Microbiology 2nd Ed provides an opportunity to reflect on the growth of the metagenomics field, from new applications to technological advances. The chapters cover methodology, analysis, AI, omics, and more.
shop.elsevier.com/books/metage...
#microbiome #omics #DataScience
shop.elsevier.com/books/metage...
#microbiome #omics #DataScience
Metagenomics for Microbiology
Metagenomics for Microbiology, Second Edition unveils the intricate and diverse world of microbial communities, emphasizing their critical roles in he
shop.elsevier.com
September 28, 2025 at 9:49 PM
Metagenomics for Microbiology 2nd Ed provides an opportunity to reflect on the growth of the metagenomics field, from new applications to technological advances. The chapters cover methodology, analysis, AI, omics, and more.
shop.elsevier.com/books/metage...
#microbiome #omics #DataScience
shop.elsevier.com/books/metage...
#microbiome #omics #DataScience
Microbiome and metabolome data decipher the keystone organism(s) in the digestive tract of primate #microbiome #metabolome #gutmicrobiome #GutMicrobes #microsky doi.org/10.1128/msys...
Microbiome and metabolome association network analysis identifies Clostridium_sensu_stricto_1 as a stronger keystone genus candidate than Bifidobacterium in the gut of common marmosets | mSystems
Previous studies have identified significant individuality within the gut microbiome
of common marmosets. The reasons for this inter-subject variability and how it relates
to health in captivity are p...
doi.org
July 25, 2025 at 7:57 PM
Microbiome and metabolome data decipher the keystone organism(s) in the digestive tract of primate #microbiome #metabolome #gutmicrobiome #GutMicrobes #microsky doi.org/10.1128/msys...
My lab is looking for a postdoctoral fellow (Metagenome/Metabolome/Human digestive tract #microbiome).
The position is available immediately and involves working with existing datasets from our lab. #postdoc #postdoctoral
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/91621
The position is available immediately and involves working with existing datasets from our lab. #postdoc #postdoctoral
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/91621
Gastroenterology and Hepatology Postdoctoral Research Associate
Position Announcement: Postdoctoral Research FellowWe are seeking a highly motivated postdoctoral fellow to join the research team of Dr. Izard, working on the systemic effects of the human digestive ...
unmc.peopleadmin.com
April 25, 2025 at 7:27 PM
My lab is looking for a postdoctoral fellow (Metagenome/Metabolome/Human digestive tract #microbiome).
The position is available immediately and involves working with existing datasets from our lab. #postdoc #postdoctoral
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/91621
The position is available immediately and involves working with existing datasets from our lab. #postdoc #postdoctoral
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/91621
Microbiome linkage to diet was used to interrogate cohorts (259,000 participants) to understand the relationship to colorectal cancer #microbiome #nutrition #diet #cohort #Microbiology #MicroSky @unmccom.bsky.social 🧪 🦠
doi.org/10.1053/j.ga...
doi.org/10.1053/j.ga...
Redirecting
doi.org
January 14, 2025 at 12:40 AM
Microbiome linkage to diet was used to interrogate cohorts (259,000 participants) to understand the relationship to colorectal cancer #microbiome #nutrition #diet #cohort #Microbiology #MicroSky @unmccom.bsky.social 🧪 🦠
doi.org/10.1053/j.ga...
doi.org/10.1053/j.ga...
The microbiome and associated postbiotics are involved in feeding intolerance after pediatric cardiac surgery #nutrition #microbiome #Microbiology #MicroSky 🧪 🦠 @unmc-chvr.bsky.social @unmccom.bsky.social
doi.org/10.1152/ajpg...
doi.org/10.1152/ajpg...
Feeding intolerance after pediatric cardiac surgery is associated with dysbiosis, barrier dysfunction, and reduced short-chain fatty acids | American Journal of Physiology-Gastrointestinal and Liver Physiology
Congenital heart disease (CHD) is the most common birth defect, occurring in roughly 40,000 U.S. births annually. Malnutrition and feeding intolerance (FI) in CHD range from 30% to 42% and are associated with longer hospitalization and increased mortality. Cardiopulmonary bypass (CPB) required for surgical repair of CHD induces a systemic inflammatory response worsening intestinal dysbiosis and leading to intestinal epithelial barrier dysfunction (EBD), possibly contributing to postoperative FI. The objective of this study was to determine the relationship of postoperative FI with intestinal microbiome, short-chain fatty acids (SCFAs), and EBD in pediatric CHD after cardiac surgery. This was a prospective study of patients aged 0–15 years undergoing cardiac surgery with CPB. Samples were collected preoperatively and postoperatively to evaluate the gut microbiome, plasma EBD markers, short-chain fatty acids (SCFAs), and plasma cytokines. Clinical data were collected to calculate a FI score and evaluate patient status postoperatively. We enrolled 26 CPB patients and identified FI (n = 13). Patients with FI had unique microbial shifts with the reduced SCFA-producing organisms Rothia, Clostridium innocuum, and Intestinimonas. Patients who developed FI had associated elevations in the plasma EBD markers claudin-2 (P < 0.05), claudin-3 (P < 0.01), and fatty acid binding protein (P < 0.01). Patients with FI had reduced plasma and stool SCFAs. Mediation analysis showed the microbiome functional shift was associated with reductions in stool butyric and propionic acid in patients with FI. In conclusion, we provide novel evidence that intestinal dysbiosis, markers of EBD, and SCFA depletion are associated with FI. These data will help identify mechanisms and therapeutics to improve clinical outcomes following pediatric cardiac surgery. NEW & NOTEWORTHY Feeding intolerance contributes to postoperative morbidity following pediatric cardiac surgery. The intestinal microbiome and milieu play a vital role in gut function. Short-chain fatty acids are gut and cardioprotective metabolites produced by commensal bacteria and help maintain appropriate barrier function. Depletion of these metabolites and barrier dysfunction contribute to postoperative feeding intolerance following cardiac surgery. Identifying mechanistic targets to improve the intestinal milieu with the goal of improved nutrition and clinical outcomes is critical.
doi.org
January 8, 2025 at 4:40 PM
The microbiome and associated postbiotics are involved in feeding intolerance after pediatric cardiac surgery #nutrition #microbiome #Microbiology #MicroSky 🧪 🦠 @unmc-chvr.bsky.social @unmccom.bsky.social
doi.org/10.1152/ajpg...
doi.org/10.1152/ajpg...
Reposted by Jacques Izard
Overview the Intestinal mucosal adaptation in response to surgical stress & MicroRNAs in gut mucosal growth and adaptation
www.tandfonline.com/doi/full/10....
www.tandfonline.com/doi/full/10....
December 23, 2024 at 4:10 AM
Overview the Intestinal mucosal adaptation in response to surgical stress & MicroRNAs in gut mucosal growth and adaptation
www.tandfonline.com/doi/full/10....
www.tandfonline.com/doi/full/10....
My lab is looking for a postdoctoral fellow (metagenomics/Metabolomics/human digestive tract #microbiome).
The position is available immediately and involves working with existing datasets from our lab. #metabolome
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
The position is available immediately and involves working with existing datasets from our lab. #metabolome
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
Postdoctoral Research Associate/Gastroenterology and Hepatology
Position Announcement: Postdoctoral Research FellowWe are seeking a highly motivated postdoctoral fellow to join our research team working on the systemic effects of the human digestive tract microbio...
unmc.peopleadmin.com
December 3, 2024 at 2:31 PM
My lab is looking for a postdoctoral fellow (metagenomics/Metabolomics/human digestive tract #microbiome).
The position is available immediately and involves working with existing datasets from our lab. #metabolome
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
The position is available immediately and involves working with existing datasets from our lab. #metabolome
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
My lab is looking for a postdoctoral fellow (metagenomics/Metabolomics/human digestive tract microbiome).
The position is available immediately and involves working with existing datasets from our lab.
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
The position is available immediately and involves working with existing datasets from our lab.
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
Postdoctoral Research Associate/Gastroenterology and Hepatology
Position Announcement: Postdoctoral Research FellowWe are seeking a highly motivated postdoctoral fellow to join our research team working on the systemic effects of the human digestive tract microbio...
unmc.peopleadmin.com
December 3, 2024 at 2:07 PM
My lab is looking for a postdoctoral fellow (metagenomics/Metabolomics/human digestive tract microbiome).
The position is available immediately and involves working with existing datasets from our lab.
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467
The position is available immediately and involves working with existing datasets from our lab.
Location: USA - Omaha, Nebraska
Apply at: unmc.peopleadmin.com/postings/88467