Ivy streeter
@ivystreeter.bsky.social
Developing CRISPR NGS off-target assays.
Interested in genomics, bioinformatics, and gene editing technologies.
https://ivystreeter.com/
Interested in genomics, bioinformatics, and gene editing technologies.
https://ivystreeter.com/
Never thought I'd reach the point of writing R with Python packages. Nor did I ever think I'd write in light mode 🤔 🤨
September 21, 2025 at 2:17 AM
Never thought I'd reach the point of writing R with Python packages. Nor did I ever think I'd write in light mode 🤔 🤨
Reposted by Ivy streeter
Excited to share our paper in
@natimmunol.nature.com! Using in vivo #CRISPR screens we identify the E3 ligase STUB1 as a new cancer immunotherapy target in CD8 T cells. STUB1 is a dual function target: STUB1 KO promotes CD8 responses and STUB1 KO hinders tumor cells. www.nature.com/articles/s41...
@natimmunol.nature.com! Using in vivo #CRISPR screens we identify the E3 ligase STUB1 as a new cancer immunotherapy target in CD8 T cells. STUB1 is a dual function target: STUB1 KO promotes CD8 responses and STUB1 KO hinders tumor cells. www.nature.com/articles/s41...
A STUB1–CHIC2 complex inhibits CD8+ T cells to restrain tumor immunity
Nature Immunology - LaFleur, Milling et al. perform an in vivo CRISPR screen of CD8+ T cells responding to tumors. They identify the E3 ubiquitin ligase STUB1 as a potent negative regulator of CD8+...
rdcu.be
August 12, 2025 at 6:49 PM
Excited to share our paper in
@natimmunol.nature.com! Using in vivo #CRISPR screens we identify the E3 ligase STUB1 as a new cancer immunotherapy target in CD8 T cells. STUB1 is a dual function target: STUB1 KO promotes CD8 responses and STUB1 KO hinders tumor cells. www.nature.com/articles/s41...
@natimmunol.nature.com! Using in vivo #CRISPR screens we identify the E3 ligase STUB1 as a new cancer immunotherapy target in CD8 T cells. STUB1 is a dual function target: STUB1 KO promotes CD8 responses and STUB1 KO hinders tumor cells. www.nature.com/articles/s41...
Reposted by Ivy streeter
You can now run tximport in Python with pytximport thanks to @compmed.bsky.social et al. academic.oup.com/bioinformati...
Gene count estimation with pytximport enables reproducible analysis of bulk RNA sequencing data in Python
AbstractSummary. Transcript quantification tools efficiently map bulk RNA sequencing reads to reference transcriptomes. However, their output consists of t
academic.oup.com
November 21, 2024 at 12:19 AM
You can now run tximport in Python with pytximport thanks to @compmed.bsky.social et al. academic.oup.com/bioinformati...