GuignardLab
@guignardlab.bsky.social
Computer Science, Morphogenesis & Variability:
From coding algorithms to decoding embryogenesis.
https://bsky.app/profile/ibdm.bsky.social
Open positions: http://www.guignardlab.com/jobs
From coding algorithms to decoding embryogenesis.
https://bsky.app/profile/ibdm.bsky.social
Open positions: http://www.guignardlab.com/jobs
Congratulations @alicegros.bsky.social for this great PhD and thanks a lot for these great years!
I’m so glad you were my first PhD student, I really enjoyed our collaboration. I can’t wait to see what you will do next!
I’m so glad you were my first PhD student, I really enjoyed our collaboration. I can’t wait to see what you will do next!
Merci infini à ma famille scientifique @pflenne.bsky.social @shamtlili.bsky.social @guignardlab.bsky.social de m'avoir tout-tout-tout appris 💙
October 13, 2025 at 10:17 AM
Congratulations @alicegros.bsky.social for this great PhD and thanks a lot for these great years!
I’m so glad you were my first PhD student, I really enjoyed our collaboration. I can’t wait to see what you will do next!
I’m so glad you were my first PhD student, I really enjoyed our collaboration. I can’t wait to see what you will do next!
Congratulation @alicegros.bsky.social, @jules-vanaret.bsky.social, @dunsingvalentin.bsky.social et al. for this great collaborative work!
And thanks you, @shamtlili.bsky.social and @pflenne.bsky.social for this really nice collaboration!
And thanks you, @shamtlili.bsky.social and @pflenne.bsky.social for this really nice collaboration!
So excited to share my 1st paper !!🌞
Co-authored with @jules-vanaret.bsky.social @dunsingvalentin.bsky.social, we developped an integrated pipeline for imaging, segmenting and analysing cell-scale patterns in gene expression + tissue properties in complex 3D tissues
elifesciences.org/reviewed-pre...
Co-authored with @jules-vanaret.bsky.social @dunsingvalentin.bsky.social, we developped an integrated pipeline for imaging, segmenting and analysing cell-scale patterns in gene expression + tissue properties in complex 3D tissues
elifesciences.org/reviewed-pre...
A quantitative pipeline for whole-mount deep imaging and analysis of multi-layered organoids across scales
elifesciences.org
July 22, 2025 at 11:49 AM
Congratulation @alicegros.bsky.social, @jules-vanaret.bsky.social, @dunsingvalentin.bsky.social et al. for this great collaborative work!
And thanks you, @shamtlili.bsky.social and @pflenne.bsky.social for this really nice collaboration!
And thanks you, @shamtlili.bsky.social and @pflenne.bsky.social for this really nice collaboration!
Reposted by GuignardLab
Register for #sfbd #devbio #ShapingLife3 meeting in sunny Cassis by the sea. If you like dev biology, join us! speakers include @justinmcrocker.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social and more @maitrejl.bsky.social
March 27, 2025 at 1:28 PM
Register for #sfbd #devbio #ShapingLife3 meeting in sunny Cassis by the sea. If you like dev biology, join us! speakers include @justinmcrocker.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social and more @maitrejl.bsky.social
Reposted by GuignardLab
Do you work on cell tracking or with cell tracking? Let's meet at the #MMC2025 conference!
We're hosting a Frontiers session on "Tracking in Life Sciences" there. If you're working on cell tracking or any form of biological tracking, this is your chance to share your insights and innovations. 👇
We're hosting a Frontiers session on "Tracking in Life Sciences" there. If you're working on cell tracking or any form of biological tracking, this is your chance to share your insights and innovations. 👇
February 24, 2025 at 10:45 AM
Do you work on cell tracking or with cell tracking? Let's meet at the #MMC2025 conference!
We're hosting a Frontiers session on "Tracking in Life Sciences" there. If you're working on cell tracking or any form of biological tracking, this is your chance to share your insights and innovations. 👇
We're hosting a Frontiers session on "Tracking in Life Sciences" there. If you're working on cell tracking or any form of biological tracking, this is your chance to share your insights and innovations. 👇
Reposted by GuignardLab
📣Exciting meeting ahead!
Join us next June in beautiful Cassis for #ShapingLife3!
www.atoutcom.com/shaping-life/
@justinmcrocker.bsky.social @mhverlhac.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social @sfbd.bsky.social
Join us next June in beautiful Cassis for #ShapingLife3!
www.atoutcom.com/shaping-life/
@justinmcrocker.bsky.social @mhverlhac.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social @sfbd.bsky.social
February 3, 2025 at 3:17 PM
📣Exciting meeting ahead!
Join us next June in beautiful Cassis for #ShapingLife3!
www.atoutcom.com/shaping-life/
@justinmcrocker.bsky.social @mhverlhac.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social @sfbd.bsky.social
Join us next June in beautiful Cassis for #ShapingLife3!
www.atoutcom.com/shaping-life/
@justinmcrocker.bsky.social @mhverlhac.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social @sfbd.bsky.social
Reposted by GuignardLab
We just released and uploaded a new version of *Mastodon*, the large-scale tracking and track-editing framework for large, multi-view images.
Mastodon is available via Fiji, via a dedicated update site.
mastodon.readthedocs.io/en/latest/do...
Below is a thread that survey some of the novelties ⏬️
Mastodon is available via Fiji, via a dedicated update site.
mastodon.readthedocs.io/en/latest/do...
Below is a thread that survey some of the novelties ⏬️
January 30, 2025 at 4:44 PM
We just released and uploaded a new version of *Mastodon*, the large-scale tracking and track-editing framework for large, multi-view images.
Mastodon is available via Fiji, via a dedicated update site.
mastodon.readthedocs.io/en/latest/do...
Below is a thread that survey some of the novelties ⏬️
Mastodon is available via Fiji, via a dedicated update site.
mastodon.readthedocs.io/en/latest/do...
Below is a thread that survey some of the novelties ⏬️
The IBDM is recruiting a new group leader!
Come and join us!!
Come and join us!!
📢 We are recruiting group leaders!
We seek researchers who address fundamental questions in biology, including the development, the function, and the dynamics of complex biological systems.
APPLY before March 30th 2025 👉 www.ibdm.univ-amu.fr/we-are-recru...
#ScienceCareers #Marseille
We seek researchers who address fundamental questions in biology, including the development, the function, and the dynamics of complex biological systems.
APPLY before March 30th 2025 👉 www.ibdm.univ-amu.fr/we-are-recru...
#ScienceCareers #Marseille
January 21, 2025 at 10:28 AM
The IBDM is recruiting a new group leader!
Come and join us!!
Come and join us!!
Reposted by GuignardLab
👉 Registration to #SHAPINGLIFE3 is now open !
This new issue of the French Developmental Biology Society international meeting will be held in the small village of Cassis near Marseille June 3-6 2025. Lots of cool science and paradise location.
www.atoutcom.com/shaping-life...
@sfbd.bsky.social
This new issue of the French Developmental Biology Society international meeting will be held in the small village of Cassis near Marseille June 3-6 2025. Lots of cool science and paradise location.
www.atoutcom.com/shaping-life...
@sfbd.bsky.social
REGISTRATION – Shaping Life 3
www.atoutcom.com
January 14, 2025 at 8:34 AM
👉 Registration to #SHAPINGLIFE3 is now open !
This new issue of the French Developmental Biology Society international meeting will be held in the small village of Cassis near Marseille June 3-6 2025. Lots of cool science and paradise location.
www.atoutcom.com/shaping-life...
@sfbd.bsky.social
This new issue of the French Developmental Biology Society international meeting will be held in the small village of Cassis near Marseille June 3-6 2025. Lots of cool science and paradise location.
www.atoutcom.com/shaping-life...
@sfbd.bsky.social
Reposted by GuignardLab
It’s official 🎉 I am excited to share that I will start my lab this spring at the Max Planck Institute for Immunobiology and Epigenetics @mpi-ie.bsky.social in beautiful Freiburg 🤩🗻☀️ I am looking forward to new collaborations and working with the fantastic community in Freiburg & its surroundings!
January 16, 2025 at 6:38 PM
It’s official 🎉 I am excited to share that I will start my lab this spring at the Max Planck Institute for Immunobiology and Epigenetics @mpi-ie.bsky.social in beautiful Freiburg 🤩🗻☀️ I am looking forward to new collaborations and working with the fantastic community in Freiburg & its surroundings!
Reposted by GuignardLab
Openings for PhD studentships at CENTURI, incl a collaborative project with @guignardlab.bsky.social. Apply if you are interested in 3D computational modelling of mouse embryonic processes!
More info and online application 👉 centuri-livingsystems.org/application-...
@univ-amu.fr @ciml.bsky.social
More info and online application 👉 centuri-livingsystems.org/application-...
@univ-amu.fr @ciml.bsky.social
December 20, 2024 at 2:30 PM
Openings for PhD studentships at CENTURI, incl a collaborative project with @guignardlab.bsky.social. Apply if you are interested in 3D computational modelling of mouse embryonic processes!
More info and online application 👉 centuri-livingsystems.org/application-...
@univ-amu.fr @ciml.bsky.social
More info and online application 👉 centuri-livingsystems.org/application-...
@univ-amu.fr @ciml.bsky.social
Reposted by GuignardLab
I wrote some thoughts about why peer review matters
It shapes scientific standards, maintains field coherence & trains new researchers
Yes, it needs improvement—but it's the glue that holds scientific progress together
briscoelab.org/2024/12/11/i...
It shapes scientific standards, maintains field coherence & trains new researchers
Yes, it needs improvement—but it's the glue that holds scientific progress together
briscoelab.org/2024/12/11/i...
In Praise of Peer Review
As an Editor of the journal Development, I often hear complaints about peer review. We all know the problems – from lengthy review times to requests for seemingly unnecessary experiments. I a…
briscoelab.org
December 11, 2024 at 10:09 AM
I wrote some thoughts about why peer review matters
It shapes scientific standards, maintains field coherence & trains new researchers
Yes, it needs improvement—but it's the glue that holds scientific progress together
briscoelab.org/2024/12/11/i...
It shapes scientific standards, maintains field coherence & trains new researchers
Yes, it needs improvement—but it's the glue that holds scientific progress together
briscoelab.org/2024/12/11/i...
Reposted by GuignardLab
Discover the winners of the FBI Image Contest 2024🔬
🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille)
🥈Place: Dalia El Arawi (IBDM)
🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM)
🏆 Congratulations to them!
👏 A big thank you to all the participants!
🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille)
🥈Place: Dalia El Arawi (IBDM)
🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM)
🏆 Congratulations to them!
👏 A big thank you to all the participants!
December 12, 2024 at 3:46 PM
Discover the winners of the FBI Image Contest 2024🔬
🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille)
🥈Place: Dalia El Arawi (IBDM)
🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM)
🏆 Congratulations to them!
👏 A big thank you to all the participants!
🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille)
🥈Place: Dalia El Arawi (IBDM)
🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM)
🏆 Congratulations to them!
👏 A big thank you to all the participants!
🎶 🪩 🪩 End of the week #segmented #organoids dancing 🪩 🪩 🎵! By @alicegros.bsky.social 🤗.
I really like them!
I really like them!
December 13, 2024 at 5:25 PM
🎶 🪩 🪩 End of the week #segmented #organoids dancing 🪩 🪩 🎵! By @alicegros.bsky.social 🤗.
I really like them!
I really like them!
Reposted by GuignardLab
🎓Looking to pursue a #PhD in the field of #BiomedicalResearch? Join us for a fully-funded #PhDposition! Apply by March 3, 2024
👉 www.mdc-berlin.de/phd
#PhDjob #PhDlife #ScienceCareer #mdcBerlin @www.helmholtz.de
👉 www.mdc-berlin.de/phd
#PhDjob #PhDlife #ScienceCareer #mdcBerlin @www.helmholtz.de
January 15, 2024 at 10:19 AM
🎓Looking to pursue a #PhD in the field of #BiomedicalResearch? Join us for a fully-funded #PhDposition! Apply by March 3, 2024
👉 www.mdc-berlin.de/phd
#PhDjob #PhDlife #ScienceCareer #mdcBerlin @www.helmholtz.de
👉 www.mdc-berlin.de/phd
#PhDjob #PhDlife #ScienceCareer #mdcBerlin @www.helmholtz.de
🚨🚨Still looking for a postdoc and a PhD for this spectacular project involving computer vision and spatial transcriptomics!
Please RT 🙂
Please RT 🙂
📣Join us in Marseille for an exciting postdoc | PhD opportunity at the crossroads of Computer Science and DevBio! Dive into a collaborative HFSP funded project, unravelling embryo bilateral symmetry. 🦐
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs
November 1, 2023 at 11:13 AM
🚨🚨Still looking for a postdoc and a PhD for this spectacular project involving computer vision and spatial transcriptomics!
Please RT 🙂
Please RT 🙂
📣Join us in Marseille for an exciting postdoc | PhD opportunity at the crossroads of Computer Science and DevBio! Dive into a collaborative HFSP funded project, unravelling embryo bilateral symmetry. 🦐
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs
October 20, 2023 at 2:07 PM
📣Join us in Marseille for an exciting postdoc | PhD opportunity at the crossroads of Computer Science and DevBio! Dive into a collaborative HFSP funded project, unravelling embryo bilateral symmetry. 🦐
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs