UMR Génomique Métabolique
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genoscopeumr.bsky.social
UMR Génomique Métabolique
@genoscopeumr.bsky.social
77 followers 130 following 21 posts
Unit research of Genoscope (CEA, Univ Evry Paris Saclay, CNRS). Axes of research :
 Environmental genomic & metagenomic
 Exploration & exploitation of microorganism metabolism
 Synthetic biology & xenobiology
 Systems biology
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genoscopeumr.bsky.social
UMR Génomique Métabolique @genoscopeumr.bsky.social · Aug 1
📢#postdoc offer in Organic chemistry (2 years) in the Environmental chemistry team of Pierre-Loïc Saaidi
Mission : Synthesis, Chemical modification, Degradation and Molecular recognition of #PersistentOrganicPollutants : #Chlordecone

@cea.fr @univparissaclay.bsky.social @univevry.bsky.social
genoscopeumr.bsky.social
📢#postdoc offer in Organic chemistry (2 years) in the Environmental chemistry team of Pierre-Loïc Saaidi
Mission : Synthesis, Chemical modification, Degradation and Molecular recognition of #PersistentOrganicPollutants : #Chlordecone

@cea.fr @univparissaclay.bsky.social @univevry.bsky.social
August 1, 2025 at 9:00 PM
genoscopeumr.bsky.social
#Joboffer #CNRS CPJ computational biology in our unit. Deadline for submitting your application is July 14. See details below. Come to join us!

@univparissaclay.bsky.social @cea.fr @genopole.bsky.social
genoscopeumr.bsky.social UMR Génomique Métabolique @genoscopeumr.bsky.social · May 14
📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities
www.sfbi.fr/emplois/offr...

@univparissaclay.bsky.social @cea.fr @genopole.bsky.social
CNRS Junior Professor Chair (CPJ) in computational biology | SFBI Société Française de Bioinformatique
Emploi en bioinformatique à Évry Tenure Track Autre
www.sfbi.fr
July 11, 2025 at 3:17 PM
Reposted by UMR Génomique Métabolique
genolabgem.bsky.social
Congratulations to @jpjarnoux.bsky.social who just achieved a major milestone by successfully defending his thesis! 🎓✨ Welcome to the world of doctors!
#AcademicLife #ProudPI #pangenomics
@genoscopeumr.bsky.social‬ @univparissaclay.bsky.social @cea.fr @univevry.bsky.social
June 12, 2025 at 6:39 AM
Reposted by UMR Génomique Métabolique
genolabgem.bsky.social
Thrilled to announce the successful defense of the Habilitation à Diriger des Recherches (HDR) by Violette Da Cunha! 🎉📚 Congratulations on this well-deserved achievement!
#AcademicLife #Archaea
@genoscopeumr.bsky.social‬ @univparissaclay.bsky.social @univevry.bsky.social
June 12, 2025 at 6:41 AM
Reposted by UMR Génomique Métabolique
genolabgem.bsky.social
We're on the lookout for a talented Software Development Engineer to join our team permanently at CEA and work on the MicroScope platform! 🚀💻 If you're passionate about software development and ready for a new challenge, we'd love to hear from you.
@genoscopeumr.bsky.social‬ @cea.fr ‪
June 12, 2025 at 6:44 AM
Reposted by UMR Génomique Métabolique
ergabiodiv.bsky.social
🔔 New ERGA–@biogeneurope.bsky.social reference #genome for Dendarus foraminosus, a darkling beetle endemic to Crete 🇬🇷
🔗 Read the #GenomeReport: open-research-europe.ec.europa.eu/articles/5-173

#Crete #biodiversity #genomics #beetle #conservation @genoscopeumr.bsky.social @genolage.bsky.social
July 1, 2025 at 10:11 AM
genoscopeumr.bsky.social
📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities
www.sfbi.fr/emplois/offr...

@univparissaclay.bsky.social @cea.fr @genopole.bsky.social
CNRS Junior Professor Chair (CPJ) in computational biology | SFBI Société Française de Bioinformatique
Emploi en bioinformatique à Évry Tenure Track Autre
www.sfbi.fr
May 14, 2025 at 8:23 AM
genoscopeumr.bsky.social
📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities
www.sfbi.fr/emplois/offr...

Join us!

@cnrsbiologie.bsky.social @univevry.bsky.social
CNRS Junior Professor Chair (CPJ) in computational biology | SFBI Société Française de Bioinformatique
Emploi en bioinformatique à Évry Tenure Track Autre
www.sfbi.fr
May 14, 2025 at 8:22 AM
genoscopeumr.bsky.social
🎉New sampling expedition of #ATLAsea with the implication of Caroline and Janaina from our labs
#MarineBiodiversity
atlasea.bsky.social ATLASea @atlasea.bsky.social · Apr 2
This week, ATLASea is in the Endoume marine station from @univ-amu.fr for a new sampling expedition focused on fish and some additional species! The team has already collected 30 new species.
In the lab, our colleagues Caroline, Janaina and Morgane sampling tissues from a coral.
#MarineBiodiversity
April 3, 2025 at 8:01 AM
genoscopeumr.bsky.social
📢#joboffer. #CDD #ingénieur en génie mécanique (12 mois) pour travailler au développement d'une plateforme pour l'évolution des micro-organismes. Expertise requise en fluidique et en automatisation matérielle pour concevoir des systèmes fluidiques précis.

www.emploi.cea.fr/offre-de-emp...
CEA - CDD Ingénieur de recherche en génie mécanique H/F
www.emploi.cea.fr
March 26, 2025 at 4:14 PM
genoscopeumr.bsky.social
📢 #PhD and #postdoctoral positions available in Pedro Oliveira lab. We seek candidates for Microbial Genomic and Epigenetic teams to work on #epigenomics of #bacteria and #microbiomes. Start: Fall 2025.
Please RT!

@cea.fr @univparissaclay.bsky.social @genopole.bsky.social @upcite.bsky.social
March 18, 2025 at 8:58 PM
Reposted by UMR Génomique Métabolique
anaconesa.bsky.social
If you are or will work on Long-read transcriptomics, do not miss this comprehensive course organized by the @longtrec.bsky.social consortium. All what you need to know, from reads to biological insights!!! @pacbio.bsky.social @nanoporetech.com @iscb.bsky.social
www.earlham.ac.uk/events/long-...
Long-reads Bioinformatics Summer School
A bioinformatics summer school on analysis of long-reads technology data, hosted by the Long-reads TRanscriptome European Consortium (LongTREC).
www.earlham.ac.uk
February 25, 2025 at 8:29 AM
genoscopeumr.bsky.social
📢Come to join us !
We are looking for a enthusiastic #phD in #bioinformatics using #LLM to work on #pangenomics in @genolabgem.bsky.social team. Fully funded phD

Apply before April 27th.

@univparissaclay.bsky.social @upcite.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
genolabgem.bsky.social LABGeM @genolabgem.bsky.social · Mar 17
We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise.
labgem.genoscope.cns.fr/2025/03/17/f...

Apply before April 27th.

@genoscopeumr.bsky.social @cea-paris-saclay.bsky.social
Comparative pangenomics. Source LABGeM.
March 18, 2025 at 12:25 PM
Reposted by UMR Génomique Métabolique
genolabgem.bsky.social
We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise.
labgem.genoscope.cns.fr/2025/03/17/f...

Apply before April 27th.

@genoscopeumr.bsky.social @cea-paris-saclay.bsky.social
Comparative pangenomics. Source LABGeM.
March 17, 2025 at 5:50 PM
genoscopeumr.bsky.social
#StandUpForScience2025
Nous exprimons notre inquiétude sur les libertés scientifiques et la désinformation organisée. Soutien solidaire au mouvement Stand Up For Science

@univparissaclay.bsky.social @cnrsbiologie.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
cea.fr CEA @cea.fr · Mar 7
#StandUpForScience2025🔬| Le CEA exprime son soutien au mouvement Stand Up For Science.

Nous sommes solidaire des chercheurs américains et de ceux exerçant aux Etats-Unis, qui vivent aujourd’hui des événements susceptibles d’entraver leur indépendance et leur liberté scientifiques.
March 7, 2025 at 11:58 AM
Reposted by UMR Génomique Métabolique
cnrs.fr
#Communiqué 🗞️ Le CNRS exprime sa solidarité avec les scientifiques exerçant aux États-Unis, où la liberté académique est aujourd'hui mise à l’épreuve.

👉 www.cnrs.fr/fr/presse/le...
March 6, 2025 at 2:51 PM
Reposted by UMR Génomique Métabolique
inserm.fr
L’Inserm est solidaire du mouvement Stand Up For Science

presse.inserm.fr/cest-dans-la...

#StandUpForScience2025
L’Inserm est très concerné par le sort de la science et des scientifiques aux Etats-Unis, ayant des relations étroites historiques avec de nombreuses institutions scientifiques américaines et en particulier le NIH et des programmes scientifiques communs. Plus largement l’Inserm est solidaire du mouvement Stand Up For Science et est solidaire de tous les scientifiques exerçant aux États-Unis, où la liberté académique est aujourd’hui mise à l’épreuve. L’Institut souhaite rappeler l’importance de la science et du progrès dans le monde actuel, où nous sommes confrontés à de nombreux enjeux de société et de nombreuses crises.
March 6, 2025 at 10:41 AM
Reposted by UMR Génomique Métabolique
ird-fr.bsky.social
L’IRD soutient le mouvement #StandUpForScience et l’ensemble de nos partenaires scientifiques dans le monde.

Face aux grands défis mondiaux, la science a un rôle central pour le développement social, environnemental et économique des sociétés, et nécessite une coopération internationale renforcée.
March 6, 2025 at 2:50 PM
genoscopeumr.bsky.social
#Joboffer: CDD CEA TECH expérimenté/ING(10 mois, début mai)
Mission : mise au point de tests enzymatiques en microplaques pour le criblage enzymatique (CAZymes)
Expertises solides en biochimie et biologie moléculaire
@univparissaclay.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
March 3, 2025 at 2:28 PM
genoscopeumr.bsky.social
🎉Congrats to Angélique D’Hont #CIRAD and #Genoscope teams. Comparative & phylogenetic analyses reveal an ongoing speciation process within Musa, characterised by large chromosome rearrangements and centromere differentiation.

Read : rdcu.be/ebGRK

@cea.fr @univevry.bsky.social @jm-aury.bsky.social
Unravelling genomic drivers of speciation in Musa through genome assemblies of wild banana ancestors
Nature Communications - Hybridizations between different wild species and subspecies within Musa genus lead to the origin of current banana cultivars with different ploidy level and constitution....
rdcu.be
February 28, 2025 at 2:07 PM
genoscopeumr.bsky.social
🧬📢 The functional adaptations highlighted in our last publication, help us to understand how extremophiles can respond to environmental changes and how ecosystems react to climate change.
Read : doi.org/10.1093/isme...

@ericpelletier.bsky.social
@cea-paris-saclay.bsky.social
@univevry.bsky.social
February 25, 2025 at 2:52 PM
Reposted by UMR Génomique Métabolique
ergabiodiv.bsky.social
🏔️ New ERGA - @biogeneurope.bsky.social reference genome for Androsace saussurei: www.biorxiv.org/content/10.1...

The #genome will shed light on plant adaptation to extreme alpine environments and the speciation of high-altitude "sky island" flora
@osug-fr.bsky.social @genoscopeumr.bsky.social
February 24, 2025 at 8:54 AM
genoscopeumr.bsky.social
🎉😀🐠🧬Our teams are proud to be part of this huge and challenging adventure through the Genoscope sequencing platform and our researchers deeply involved !
Follow Patrick Wincker, Jean-Marc Aury (@jm-aury.bsky.social) and Pedro Oliveira teams
@CNRS @cea-paris-saclay.bsky.social @univevry.bsky.social
cnrsbiologie.bsky.social CNRS Biologie @cnrsbiologie.bsky.social · Feb 13
🌊🔬 ATLASea : bilan exceptionnel en 2024 !

Plus de 1000 espèces marines collectées lors des campagnes océanographiques du PEPR ATLASea en Nouvelle-Calédonie, à Dinard, dans la Manche et en Guadeloupe ! 🐠🦑

🤝 @atlasea.bsky.social @cea.fr
➡️ Plongez dans cette aventure scientifique
ATLASea : plus de 1000 espèces marines collectées en 2024 !
Un an après son lancement, le programme ATLASea, progresse vers son objectif de séquencer les génomes d’espèces marines.
buff.ly
February 17, 2025 at 11:32 PM
genoscopeumr.bsky.social
🎉See C versions of Arima Genomics mapping pipeline tools (htslib library). These tools are designed to efficiently process & analyze HTS sequencing data, particularly for Hi-C & other chromosome conformation capture experiments.
github.com/Genoscope-LBGB/arima_htslib

#bioinformatic #genomic #Hi-C
February 17, 2025 at 11:20 PM
genoscopeumr.bsky.social
👍Congrats to L. Janniere, N. Sarica and B. Jester from #Synovance. Their model is suggesting that DNA looping is an important cause of context sensitivity and can be used for better controlling the transcription of engineered circuits. #syntheticbiology #AppliedMicrobiology

www.mdpi.com/3171930
Towards a Better Control of Engineered Circuit Transcription in Bacterial Genomes
The transcription of genes and engineered circuits can deeply vary when inserted into different genomic loci. This unpredictable performance, termed context sensitivity, complicates strain development...
www.mdpi.com
February 17, 2025 at 11:11 PM