#bioinformatic
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batllelab.bsky.social
15/17

We thank all members of the BatlleLab and our collaborators @irbbarcelona.org & @cnag-eu.bsky.social. Special mention to A. Riera and C. Sanchez for TGFβ inhibitor synthesis. We acknowledge the dedication of technical platforms, the bioinformatic unit, and the animal facility.
November 7, 2025 at 12:30 PM
keikoutorii.bsky.social
🧬🌱Research Specialist Position Open🌱🧬 -Please spread the words
HHMI, UT Austin. NGS-based analyses/single cell biology to investigate environmental and hormonal control of plant stem cell differentiation. Requires both wet lab and bioinformatic skills.
hhmi.wd1.myworkdayjobs.com/en-US/Extern...
Research Specialist - Torii Lab
Primary Work Address: 2500 Speedway, Austin, TX, 78712 Current HHMI Employees, click here to apply via your Workday account. About the Lab We are currently seeking a proactive Research Specialist to s...
hhmi.wd1.myworkdayjobs.com
November 1, 2025 at 7:39 PM
psy-fer.bsky.social
I made www.reddit.com/r/bioinforma...
I did this because the r/bioinformatics channel doesn't like talking about tools, especially if you wrote it yourself.

If you build bioinformatic tools or want to learn more about it, join the subreddit and start posting :)
bioinformaticsdev
A community for building better bioinformatics tools. Share your open-source bioinformatics tools at any stage of development - from early ideas to stable releases. Get feedback on CLI design, code ar...
www.reddit.com
October 24, 2025 at 6:56 AM
corderolab.bsky.social
You stole my words...Fundamental discoveries that do not involve millions invested in the generation of masses of bioinformatic data and the use of 'fashionable' systems and approaches????... Surreal in a good way. Congratulations once more to the whole team!!
October 23, 2025 at 4:30 PM
wslresearch.bsky.social
🌿 #PostDoc Alert! PhD in #EnvironmentalSciences? Proficient in #bioinformatic, #EcologicalModelling and good knowledge of trait-based #ecology🦋? Our #ConservationBiology group offers a PostDoc position in biotic and trophic interactions🐜: apply.refline.ch/273855/1769/... #UrbanEcology #ScienceJobs
Job offer: PostDoc in biotic and trophic interactions 90% (f/m/d) As part of the interdisciplinary PAPPUS project, which explores how plant communities and urban green space management support biodiversity and residents' quality of life, you will work with existing data. Your focus will be on analyzing biotic and trophic interactions between plants and arthropods, including predators, herbivores, pollinators, and detritivores. The data were collected from 60 public and private green spaces in Zurich. Your first task will be to analyse metabarcoding data from over 1200 invertebrate samples to generate a species lists. You will then examine the structure of mutualistic and antagonistic multitrophic networks, including food webs, and model their responses to urbanisation, management intensity, and plant preferences among residents. The position offers flexibility to develop your own research ideas within the scope of PAPPUS. You are expected to publish your findings in high-impact journals and present them at international conferences. Engagement with practitioners, especially through presentations and outreach in French, is also an important part of this PostDoc. You have a PhD degree in environmental science or in a related field. You have a good publication record as well as a background in ecological sciences and quantitative analyses. Proficiency in bioinformatic, metabarcoding, multitrophic ecology (food web), and ecological modelling is required, as is good knowledge of trait-based ecology. Practical and interdisciplinary experiences (e.g., with urban engineers) and knowledge of the principles and theories of urban ecology are helpful. You are ambitious, motivated and communicative. You are used to a high standard of independent, structured and you demonstrate a high level of team spirit. Proficiency in English and French, as well as good knowledge in German is required.
October 20, 2025 at 6:29 AM
peterhox.bsky.social
Latest collaborative paper out this week - including work on my "favourite fly". Amazing bioinformatic work by Peter Mulhair, changing views on phylogeny and pushing back evolutionary origins of bicoid. Includes first ever in situs on Bombylius showing anterior bcd RNA.

bsky.app/profile/pete...
October 18, 2025 at 11:27 AM
yefis-immunology.bsky.social
🚀 Platforma – no-code bioinformatic analysis

Say goodbye to coding! 🧬 Analyze NGS data of any species with ease, from gene expression to VDJ and single-cell workflows.

💻 Download it for free 👉 platforma.bio

@milaboratories.bsky.social
October 13, 2025 at 1:45 PM
profsimonfisher.bsky.social
Our genomic region of interest was big, only partially characterized & likely to include many unknown genes. It was 1998, some years before the Human Genome Project finished a first draft. As sections of sequence became available, I used bioinformatic approaches to build maps of the interval. 11/n
Image shows a bioinformatic map aligning contiguous sections of sequence data corresponding to one part of chromosome 7, with respect to a set of known genetic markers. One of the bottom rows shows individual protein-coding genes that were predicted by analysing the DNA sequence information. Taken from Figure 2 of the paper “The SPCH1 region on human 7q31: genomic characterization of the critical interval and localization of translocations associated with speech and language disorder” by Cecilia Lai and colleagues, published in the American Journal of Human Genetics in 2000 (volume 67, pages 357 to 368)
October 4, 2025 at 1:45 PM
rubenvicper.bsky.social
Good opportunity for wheat or bioinformatic researchers!
philippaborrill.bsky.social Philippa Borrill @philippaborrill.bsky.social · Oct 3
We are looking for a postdoctoral researcher to join our team! They will work on homeolog-informed approaches to tackle cold tolerance in wheat @johninnescentre.bsky.social

Please find out more and apply here: jobs.jic.ac.uk/Details.asp?...

#plantsciences #plantscijobs
John Innes Centre
jobs.jic.ac.uk
October 4, 2025 at 1:05 AM
bnwolford.bsky.social
🧬 During the first iteration of the Global Biobank Meta-analysis (led by Wei Zhou) we took a deep-dive into the VTE GWAS results to prioritize causal genes at the 38 significant loci using integrative bioinformatic gene prioritization.
October 3, 2025 at 6:21 PM
infect-net.bsky.social
And the final talk of the day is held by Noriko Cassman on VirJenDB, a database on a FAIR data and bioinformatic platform for viruses @nfdi4microbiota.bsky.social #support #databases
September 25, 2025 at 9:47 AM
malariapapers.bsky.social
Bioinformatic and literature assessment of toxicity and allergenicity of a CRISPR-Cas9 engineered gene drive to control Anopheles gambiae the mosquito vector of human malaria
Bioinformatic and literature assessment of toxicity and allergenicity of a CRISPR-Cas9 engineered gene drive to control Anopheles gambiae the mosquito vector of human malaria
CONCLUSIONS: Bioinformatic and literature assessments found no convincing evidence to suggest that transgenic products expressed from dsxF^(CRISPRh) were allergens or toxins, indicating that environmental releases of this population suppression gene drive for malaria vector control should not result
pubmed.ncbi.nlm.nih.gov
August 15, 2023 at 5:00 AM
germusthermophilus.bsky.social
Every time I hear someone in management pushing the development of bioinformatic pipelines that can be used by people without understanding bioinformatics, I think of papers like this one.
January 26, 2025 at 8:21 AM
castltrastondrs.bsky.social
MedSky🧪#IDSky @cellpress #Viralimmunology There are the reason to #MaskUp 😷 and #Getboosted #COVID kills
#Viralimmunology #Molecularmedicine identify a spectrum of pathway dysregulations in #alveolarepithelium, #bronchialepithelium & #bloodvessels in severe #COVID patients vs non-#COVID19 controls,
A) Schematic workflow including cohort design, autopsy specimen collection, pathology-guided LMD, integrated sample preparation, MS-based deep proteome profiling, and bioinformatic analysis to analyze the ten regions of pulmonary tissues of severe COVID-19 patients and non-COVID-19 control individuals. (B) Representative H&E images of selected regions for spatial proteome profiling (scale bar represents 100 μm). Region names and their abbreviations are labeled above images. (C) Schematic human pulmonary structure. Case counts for each region are labeled including BE (n = 11), BMP (n = 7), AE (n = 10), HAT2 (n = 3), PF (n = 11), ASI (n = 10), VE (n = 11), N-BE (n = 2), N-AE (n = 3), and N-VE (n = 3). (D) Total number (as bar graph) and average number (as black dot) of identified protein groups for each region and project-specific spectral library. (E) Dynamic range of the proteome within ten regions based on average protein LFQ intensity. (F) Box-whisker plot of Pearson correlation coef
January 19, 2024 at 1:09 PM
georgykurakin.bsky.social
My preprint has been cited in 2 reviews. Here it is:
doi.org/10.1101/2022...

I performed a bioinformatic research on bacterial lipoxygenases and found peculiarities in data which could explain the role of this enzyme in cross-kingdom host jumps 🧪🌳🚶‍♂️🦠

The revised version is submitted to a journal
Graphical abstract
April 5, 2024 at 10:45 PM
nanosaravana.bsky.social
Good to see your appreciation. I will try for an alternative fellowship. At an unlikely event, would you consider my CV for one of the PhD positions? Apart from the chemistry background, I also have computational chem knowledge with python and packages, bioinformatic tools such as ChemTK etc.
March 9, 2025 at 10:20 AM
bitesizedna.bsky.social
Bioinformatic error leads to overestimation of European backflow into Africa http://www.unz.com/gnxp/there-was-no-vast-migration-of-eurasians-into-africa/
There was no vast migration of Eurasians into Africa
Last fall while at ASHG this paper came out, Ancient Ethi...
www.unz.com
December 1, 2024 at 5:59 AM
iscb-scs.bsky.social
🎨 Meet the creative minds behind #SCS2025!
Our amazing Design Committee is bringing the 21st ISCB Student Council Symposium to life 💫

🙌 Huge thanks to Ece, Gizem, Divy, Vuslat, Isabella & Akifur!

📍 Liverpool, 20 July 2025
#ISCB #CompBio #Bioinformatic
June 27, 2025 at 2:47 PM
ianholmes.org
@dereklowe.bsky.social’s latest is fascinating. Begins with a bioinformatic search for dehalogenase enzymes in microbial genomes… But it’s also cool because at the bottom is a link to my all-time favorite post of his, describing the ultraviolent chemistry of F2O2:

www.science.org/content/blog...
Things I Won't Work With: Dioxygen Difluoride
www.science.org
May 1, 2025 at 3:53 AM
marcveld.bsky.social
Not much to see in the B cell compartment. Of course, with bioinformatic analysis of many parameters, you will find something. If this is of physiological relevance is a different matter.
6/9
August 25, 2025 at 10:23 AM
biorxiv-microbiol.bsky.social
Development of Advanced Bioinformatic Profiles to Improve the Detection and Functional Understanding of Fungal Acid Phosphatases https://www.biorxiv.org/content/10.1101/2025.08.21.671465v1
August 25, 2025 at 4:16 PM
camiladuitama.bsky.social
What is the most exciting bioinformatic research you’ve recently come across? I am interested in people who try to democratize knowledge, helping others and who aren't obsessed with publishing papers and satisfying their own curiosity. I want to find research that matters 👏
October 27, 2025 at 7:37 PM
dr-kursat-yaykasli.bsky.social
I'm thrilled to announce the completion of my Applied Biostatistics and Bioinformatics certification from CQ Beratung Bildung. This intensive and comprehensive course gave me a deep understanding of biological data's statistical and bioinformatic methods. #Bioinformatics #ComputationalBiology
November 25, 2024 at 2:37 PM
genomestability.bsky.social
Therapeutic options within DNA damage response:awesome bioinformatic analysis @NatureRevCancer http://goo.gl/wDv4qp http://t.co/JWdtZmhx8Q
November 24, 2024 at 1:09 AM
mattolm.bsky.social
A fantastic postdoc position in bioinformatic microbiome research is available in Justin Sonnenburg's lab at Stanford! I'm leaving after 4 great years to start my lab at Boulder, and Justin is looking to fill my position. DM me or email Justin (Admin_Sonnenburg@stanford.edu) for questions
November 19, 2024 at 7:05 PM