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farrowlab.bsky.social
FarrowLab
@farrowlab.bsky.social
Neural circuits, instinctive behaviors and evolution @nerflabs.bsky.social and Dept of Biology, KU Leuven.
see: farrowlab.sites.vib.be

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🚨 CALL FOR APPLICATIONS 🚨

Looking for your next academic step?
Join our interdisciplinary IOB MD-PhD / PhD Program to explore the visual system and pioneer therapies for eye diseases.

⏰ Deadline: November 16, 2025 (midnight CET)

🔗 iob.ch/phd-md-phd-program

#IOB #Basel #PhDProgram #VisionScience
iob.ch
September 30, 2025 at 11:06 AM
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We have two open positions for a ML and a LLM engineer to launch a machine learning expertise unit in our center @vibai.bsky.social, see vib.ai/en/opportuni...
vib.ai
September 23, 2025 at 11:21 AM
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September 22, 2025 at 1:59 PM
Fantastic to see this collaborative work with Hopi Hoekstra out in Nature (tinyurl.com/3at3zvby). Lead by @felixbaier.bsky.social and @katjareinhard.bsky.social. Not possible without @bramnuttin.bsky.social , Chen Liu and @arnausd.bsky.social.

Excited to see where this work leads.
July 23, 2025 at 11:55 PM
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🚨Very happy that my PhD work is now out in @nature.com!

We discovered that evolution, by acting in the midbrain, shifted the threshold to escape in Peromyscus mice, to fine-tune defensive strategies in different environments

www.nature.com/articles/s41...

This was a truly collaborative effort! 🧵⬇️
July 23, 2025 at 3:06 PM
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Finally it's out! www.nature.com/articles/s41... How flexible are essential innate behaviours and their underlying neural circuits? @felixbaier.bsky.social & I, with Hopi Hoekstra and @farrowlab.bsky.social, addressed this by studying the #evolution of threat avoidance in Peromyscus mice.
The neural basis of species-specific defensive behaviour in Peromyscus mice - Nature
Visual threat triggers contrasting freeze and escape defensive responses in two species of deer mice as a result of different activation thresholds downstream of the superior colliculus in the do...
www.nature.com
July 23, 2025 at 4:57 PM
It was joy writing this perspective with @katjareinhard.bsky.social on the importance for neuroscientists to embrace an evolutionary perspective
July 16, 2025 at 4:33 PM
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In a new essay in The Transmitter,
@farrowlab.bsky.social and katjareinhard.bsky.social‬ make the case for evolutionary thinking in systems neuroscience. Comparative approaches = deeper insight into brain function.
tinyurl.com/33sebn
f7

✨ Artwork by Eoin Ryan
Systems and circuit neuroscience need an evolutionary perspective
To identify fundamental neuroscientific principles that generalize across species, neuroscientists must frame their research through an evolutionary lens.
tinyurl.com
July 16, 2025 at 11:25 AM
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We map brain-wide functions of awake mice at the single-voxel scale !

Introducing PyfUS our brand new, ground-setting, open-source software for analysing brain-wide functional ultrasound imaging datasets.

Now in #Neurocomputing
@sciencedirect.bsky.social

doi.org/10.1016/j.ne...
July 16, 2025 at 10:44 AM
Excited to see this out! 🎉 Congratulations to the fantastic
@nkkuhn.bsky.social for leading the way, with key contributions from Chen Li and
@boninlab.bsky.social. Thanks also to: @nerflabs.bsky.social, @fwovlaanderen.bsky.social, @viblifesciences.bsky.social, and KU Leuven.
tinyurl.com/3rfe6f2k
July 16, 2025 at 6:20 AM
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Preprint on how to create an equitable and healthy lab environment doi.org/10.1101/2025...! During the SAFE Labs workshop 2024 we came up with concrete action points, summarised in these guidelines for Lab Handbooks github.com/SAFE-Labs-Do...
May 30, 2025 at 4:58 PM
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Postdoc opportunity in the heart of Europe! Check out the flyer below.
Join our team on an international project with Anthony Holtmaat exploring synaptic plasticity and specificity in cortical and thalamocortical circuits.
April 8, 2025 at 12:48 PM
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The @ppjgoncalves.bsky.social lab is recruiting a PhD student via the VIB.AI International PhD Call 2025!
Join to develop machine learning tools for neuroscience, focusing on simulation-based inference & neural circuit modeling.

📍 Leuven
🗓️ Apply by June 22 → https://tinyurl.com/53nc9vnd
May 21, 2025 at 8:57 AM
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New paper on bioRxiv: "Ambient Light Impacts Innate Behaviors of New-World and Old-World Mice" - together with @farrowlab.bsky.social, with data from NERF master students and two of my lab members! A study across 3 species: Mus musculus, Peromyscus maniculatus & P. polionotus doi.org/10.1101/2025...
Ambient Light Impacts Innate Behaviors of New-World and Old-World Mice
Animals encounter predators and prey under diverse lighting conditions that signal different risks and opportunities, yet how ambient illumination shapes innate approach and avoidance behaviors remain...
doi.org
May 19, 2025 at 6:55 AM
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Thus new review by Jennifer Hoy (University of Nevada) and Karl Farrow (NERF) takes a deep dive into the role of the superior colliculus.
https://www.cell.com/current-biology/fulltext/S0960-9822(25)00052-1

Beautifully illustrated by Pia Rachedi + open access

@farrowlab.bsky.social
March 18, 2025 at 6:48 AM
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Big news: we are setting up a new non-profit organization to run bioRxiv and medRxiv. It's called openRxiv [no it's not a new preprint server; it's dedicated organization to oversee the servers] openrxiv.org 1/n
Homepage - openRxiv
openRxiv is an independent non-profit, the new organizational home for bioRxiv and medRxiv, enabling researchers to instantly share groundbreaking findings with the global scientific community.
openrxiv.org
March 11, 2025 at 1:20 PM
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How much analgesia is needed to manage pain levels in mice after brain surgeries?

A single dose of meloxicam seems to be enough. Even the addition of opioids cannot provide a clear benefit. (in line with recent work from others, see cites in our preprint): www.biorxiv.org/content/10.1...
GrimACE: Automated, multimodal cage-side assessment of pain and well-being in mice
Pain and welfare monitoring is essential for ethical animal testing, but current cage-side assessments are qualitative and subjective. Here we present the GrimACE, the first fully standardised and aut...
www.biorxiv.org
March 11, 2025 at 7:00 AM
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🥳🤩Last piece of work from Urban lab @nerflabs.bsky.social
@viblifesciences.bsky.social
@cbdresearch.bsky.social
in collab with Babin lab from Department of Telecommunications and Information Processing of Gent Uni 🇧🇪
Large Scale in vivo Acquisition, Segmentation and 3D Reconstruction of Cortical Vasculature using $$\mu $$ μ Doppler Ultrasound Imaging - Neuroinformatics
The brain is composed of a dense and ramified vascular network of arteries, veins and capillaries of various sizes. One way to assess the risk of cerebrovascular pathologies is to use computational mo...
link.springer.com
January 14, 2025 at 10:41 AM
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Do you have ambitious plans to study the molecular mechanisms of environmental adaptation in mammalian model systems? Join EMBL Rome as an independent group leader: generous core funding & benefits, top-level students & core facilities. embl.wd103.myworkdayjobs.com/en-US/EMBL/d...
January 28, 2025 at 3:57 PM
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Thrilled to announce that my lab has been awarded the Research to Prevent Blindness Career Development Award!

Now the lab has a *funded* opening for a post-doctoral fellow interested in studying neurodevelopmental disorders in the retina. More info here! www.vlasitslab.org/joinus
December 10, 2024 at 11:03 PM
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Our lab is looking for a postdoc interested in the development, plasticity, and control of cortical circuits (bhariokelab.com).

Please send CV and some research ideas of interest to you. We're flexible & open to new ideas in the lab's general vein!

Please repost! More details at shorturl.at/wLvZw.
Bharioke Lab | Neuroscience Research | Developmental Plasticity and Circuit Function
Bharioke lab | Research lab performing all-optical interrogation of neuronal circuit formation and function to build computational models of circuits driving cognitive functions
www.bhariokelab.com
January 7, 2025 at 6:30 AM
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we're hiring a neuroscientist - looking for people with in vivo rodent physiology experience
science.xyz/careers/neur...
Neuroscientist | Science Corporation
Science Corporation is a clinical-stage medical technology company.
science.xyz
December 19, 2024 at 6:06 PM
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I am delighted to highlight our recent publication in The Innovation — @theinnovation.bsky.social — titled “Principles of visual cortex excitatory microcircuit organization”, where we showcase optomapping, ie 2p optogenetic circuit mapping! www.cell.com/the-innovati...
Principles of visual cortex excitatory microcircuit organization
Synapse-specific connectivity and dynamics determine microcircuit function but are challenging to explore with classic paired recordings due to their low throughput. We therefore implemented optomapping, a ∼100-fold faster two-photon optogenetic method. In mouse primary visual cortex (V1), we optomapped 30,454 candidate inputs to reveal 1,790 excitatory inputs to pyramidal, basket, and Martinotti cells. Across these cell types, log-normal distribution of synaptic efficacies emerged as a principle.
www.cell.com
December 19, 2024 at 3:29 AM
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The Neural Systems & Behavior course at @mblscience.bsky.social is now open for applications (deadline 1st Feb 2025, tinyurl.com/329nbtzp). Students often describe this 8-week training course as a life-changing and eye-opening scientific experience. Apply and join us in magical Woods Hole 💫🐙🧠🔬
December 18, 2024 at 9:19 AM
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Scientist position at The Hospital for Sick Children in Toronto. We are looking for neuroscientists with interests in the molecular and cellular bases of cognition. The position is open-rank, and the successful candidate will also be appointed at U Toronto. Deadline is Feb 15th. Come join us!
career.sickkids.ca
December 17, 2024 at 2:04 PM