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denbi.bsky.social
de.NBI & ELIXIR Germany
@denbi.bsky.social
The de.NBI network provides bioinformatics services and comprehensive compute resources to researchers in the life sciences and biomedicine in Germany and Europe. Since August 2016 the German Node of ELIXIR, ELIXIR Germany, is run by de.NBI partners.
The @denbi.bsky.social crew & friends from Germany at #BioHackEU25!
November 14, 2025 at 8:19 AM
🦕💡 On 4–5 Nov, de.NBI & ELIXIR Germany hosted the 24th ELIXIR Board Meeting in Berlin!
Honored to welcome delegates from @elixir-europe.org Nodes & #BMFTR, highlighting why research infrastructures are anything but dinosaurs—flexible, connected & future-ready. Big thanks to all!
November 12, 2025 at 12:18 PM
Reposted by de.NBI & ELIXIR Germany
yey! also spotted hackathon co-lead @philouail.bsky.social - I was only virtually attending 😔 - and very likely missed a lot of fun
🎉 We are excited to join this year's #Biohackathon Europe in Bad Saarow!
Looking forward to a week of fruitful projects, networking, & fun—thanks to the @elixir-europe.org Hub & everyone joining onsite or online!
🚀 @sneumann.bsky.social, Michael Crusoe, Nils Hoffmann & many more from across Europe.
November 7, 2025 at 4:33 PM
Reposted by de.NBI & ELIXIR Germany
Many thanks to all authors - Arber Qoku, Martin Rohbeck, Florin Walter, Ilia Kats, Florian Buettner - and everyone who supported this work. Funding from @erc.europa.eu , @denbi.bsky.social and @dfg.de.
@dkfz.bsky.social @embl.org @oliverstegle.bsky.social

📑 Preprint: doi.org/10.1101/2025...
13/13
MOFA-FLEX: A Factor Model Framework for Integrating Omics Data with Prior Knowledge
Latent factor models are first-line analysis approaches for single- and multi-omics data, essential for data integration, alignment, and biological signal discovery. To cater for new technologies and ...
doi.org
November 7, 2025 at 10:29 AM
Reposted by de.NBI & ELIXIR Germany
Curious about plant genomics? 🌿

Join our upcoming training courses to explore how plant genomes are assembled and annotated.

Details 👉 www.izmb.uni-bonn.de/en/pbb/news#...
#Genomics #Bioinformatics #DeNBI #PlantScience
@denbi.bsky.social @puckerlab.bsky.social
November 6, 2025 at 5:25 PM
Reposted by de.NBI & ELIXIR Germany
🚀 WE ARE HIRING 3️⃣ Independent Group Leaders for #mdcBerlin's new cutting-edge Bioengineering Cluster within our Biomedical Engineering Program.

Lead cutting-edge research at the interface of biology, engineering, and medicine in Berlin.

👉 Apply now: www.mdc-berlin.de/career/jobs/...
October 9, 2025 at 11:00 AM
Reposted by de.NBI & ELIXIR Germany
👀 Are you a strategic operator with strong interpersonal leadership?
#ELIXIR is looking for a Head of Operations to lead the ELIXIR Operations team and coordinate implementation of our scientific programme.
Apply by 15 November 👉 https://loom.ly/uHj611E
November 6, 2025 at 11:45 AM
🎥 Missed the first @denbi.bsky.social × @ghga.bsky.social webinar? No worries—it's now available on YouTube!
Catch up on "Building a RDM Ecosystem - de.NBI & ELIXIR-DE and how to use the de.NBI Cloud".
Watch here: www.youtube.com/watch?v=kiAD...
#deNBI #ELIXIRDE #GHGA #Webinar #OpenScience
Building a RDM Ecosystem: de.NBI & ELIXIR-DE and how to use the de.NBI Cloud w/ Daniel Wibberg
YouTube video by GHGA - The German Human Genome-Phenome Archive
www.youtube.com
November 6, 2025 at 9:00 AM
📊🚀 Check out Project #15 “Metrics” at Biohackathon Europe 2025!
Monitoring KPIs for ELIXIR Services—mapping indicators & creating an “indicator ontology” for better self-assessment & reporting.
Partners: ELIXIR UK, CZ, DE, CH, IE, & more.
🔗 github.com/elixir-europ...
@elixir-europe.org #BioHackEU25
November 6, 2025 at 7:51 AM
Reposted by de.NBI & ELIXIR Germany
✔️Just published:

#TYGS and #LPSN in 2025: a Global Core Biodata Resource 🧬🖥️ for genome-based classification and nomenclature of prokaryotes 🦠 within #DSMZDigitalDiversity

👉 academic.oup.com/nar/article/...
TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity
Abstract. The List of Prokaryotic names with Standing in Nomenclature (LPSN, https://lpsn.dsmz.de/) is an authoritative, expert-curated resource on prokary
academic.oup.com
November 3, 2025 at 5:39 PM
Reposted by de.NBI & ELIXIR Germany
🇭🇷 Croatia has joined ELIXIR as an Observer, following approval by the ELIXIR Board on 4 November 2025. 💪 Croatian #bioinformatics community can strengthen its collaboration with other ELIXIR Nodes!

Read the news: https://loom.ly/Lb-Wt1I
November 4, 2025 at 1:41 PM
🎉 We are excited to join this year's #Biohackathon Europe in Bad Saarow!
Looking forward to a week of fruitful projects, networking, & fun—thanks to the @elixir-europe.org Hub & everyone joining onsite or online!
🚀 @sneumann.bsky.social, Michael Crusoe, Nils Hoffmann & many more from across Europe.
November 4, 2025 at 12:16 PM
🚀 de.NBI & ELIXIR-DE on tour at EOSC Symposium 2025 in Brussels!
Björn Grüning showcased the power of @galaxyproject.bsky.social Europe (usegalaxy.eu) and the de.NBI Cloud in the EOSC ecosystem.
#EOSC2025 #Bioinformatics #usegalaxy #ELIXIRDE #deNBI
November 4, 2025 at 8:55 AM
Reposted by de.NBI & ELIXIR Germany
📢 We’re hiring!
The DSMZ is looking for a Scientific Lead for the SILVA Database — a unique opportunity to shape one of the world’s most important scientific resources for microbial taxonomy and ecology.
Apply now and help us shape the future of microbial research.

👉 www.dsmz.de/dsmz/career/...
November 3, 2025 at 9:52 AM
Reposted by de.NBI & ELIXIR Germany
Project 14 here at the #BioHackEU25 will work to assess and improve the state of #mzTab-M for #Metabolomics over the next few days. Plus having fun meeting all the other attendees here near Berlin
November 3, 2025 at 2:15 PM
Next @denbi.bsky.social #training course with @embl.org: 🧬📊 Unlock your research potential - #DataCarpentry workshop, Feb 2–6, 2026 in Heidelberg & Barcelona.
Learn data management, #R programming, visualisation & bio data analysis.
See: www.denbi.de/training-cou...
#LifeScience #Bioinformatics
November 3, 2025 at 12:26 PM
Reposted by de.NBI & ELIXIR Germany
Postdoctoral Research Position in Plant–Microbe Interactions | University of Cologne, Germany

The Saur Lab at the University of Cologne invites applications for a postdoctoral position in molecular plant–microbe interactions. This ERC-funded role offers an opportunity to study non-host resistance…
Postdoctoral Research Position in Plant–Microbe Interactions | University of Cologne, Germany
The Saur Lab at the University of Cologne invites applications for a postdoctoral position in molecular plant–microbe interactions. This ERC-funded role offers an opportunity to study non-host resistance to fungal pathogens in cereal crops within one of Europe’s top research environments.
agristok.net
October 31, 2025 at 9:25 AM
Reposted by de.NBI & ELIXIR Germany
Interested in long-read plant genomics? 🌱

We are sharing our ONT P2 Solo sequencing outputs per flowcell — explore our real data and experience here:

👉 www.izmb.uni-bonn.de/en/pbb/news#...

#Genomics #LongReads #PlantSci @puckerlab.bsky.social
November 1, 2025 at 10:47 AM
Reposted by de.NBI & ELIXIR Germany
📣 Open position:

We are looking for a new #ScientificLead for the #SILVA database 🧬🖥️, who will be responsible for guiding the development of this important resource and for curating the #SILVA taxonomy🌳.

Read and share!

👉 www.dsmz.de/dsmz/career/...

🧪🦠🌱🦋💽
October 31, 2025 at 5:41 PM
Reposted by de.NBI & ELIXIR Germany
Today, a global community of hackers gathers in Berlin 🇩🇪 for the start of #BioHackEU25. Since 2019, over 2200 participants have gathered together for an intense week of collaboration to advance 275 projects.

Read the news: https://loom.ly/6sE_kdI
November 3, 2025 at 9:01 AM
Reposted by de.NBI & ELIXIR Germany
We are looking for a colleague to join us at RWTH Aachen University:

🌱 Full Professor in Stress Resilience of Plants (W3 tenured)

📌What are we looking for? Someone working with us strategically at the interface of plant biology/ physiology/ resilience

#academicjobs #facultyjobs #PlantJobs

1/4
October 30, 2025 at 12:03 PM
Reposted by de.NBI & ELIXIR Germany
Workflows by day, French wine and cheese by night 🍷🧀
Get ready to join us in Clermont-Ferrand, France for #GCC2026, June 22–26 2026! Learn, collaborate, and celebrate open science in the heart of Auvergne.

galaxyproject.org/news/2025-10...
GCC2026: The Galaxy Community is Heading to Clermont-Ferrand, France
Join us in June 2026 in the volcanic heart of Clermont-Ferrand for a week of collaboration, discovery, and open science.
galaxyproject.org
October 30, 2025 at 3:31 PM
🌟 Job Alert! 2
🎉 Doctoral & Postdoctoral positions in Computational Biology/Biomathematics at Max Planck Institute, Magdeburg, Germany. Develop computational methods for microbial metabolism. For more information see 👉 www.denbi.de/de-nbi-jobs-... #Bioinformatics #JobOpening
October 29, 2025 at 12:23 PM
🌟 Job Alert! 🌟 Scientific Lead Silva Database (m/f/d) at @leibniz-dsmz.bsky.social @dsmzd3.bsky.social. Guide development, align data & services with user needs. TV-L 14 salary level. Apply now! For more information see: www.denbi.de/de-nbi-jobs-...
#SILVADatabase #JobOpening #Bioinformatics
October 29, 2025 at 10:23 AM
🌌🧬 The legendary hands-on @galaxyproject.bsky.social workshop is back—don’t miss out!
📅 March 9–13, 2026 | 📍 Uni Freiburg
Beginners welcome—learn QC, #ChIP-seq, #RNA-seq, variant calling & #microbiome analysis in Galaxy!
🔗 More info: training.galaxyproject.org/training-mat...
#useGalaxy #NGS
October 28, 2025 at 11:12 AM