Our paper is out ✨

doi.org/10.1016/j.ce...

We propose a self-supervised anomaly representation that encodes morphological inter-feature dependencies for high-content image-based cell phenotyping!

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Excited to announce the first @cshlnews.bsky.social meeting on Cell Modeling in Space and Time, June 2026 💫

meetings.cshl.edu/meetings.asp...

Bringing together experiments, computation and theory to explore dynamic, multi-scale cellular organization and function!

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Nature Biomedical Engineering is hiring again! This time we're hoping to add an editor with machine learning expertise to the team (although we are open to those with other relevant expertise!) Deadline is Oct 20. Please RT! springernature.wd3.myworkdayjobs.com/SpringerNatu...

📢We're #hiring Group Leaders!

Apply to lead a lab at Janelia & advance biology using theory, computational modeling & machine learning.

🔹5-year renewable appointment
🔹Pioneer new tools & approaches
🔹Collaborate across disciplines

Apply by Nov. 4👉 https://janelia.link/groupleader

We are searching for an enthusiastic scientist to join our team and establish annual killifish as a model system for early developmental biology and biophysics! @embl.org @embldbunit.bsky.social

Apply here:
embl.wd103.myworkdayjobs.com/EMBL/job/Hei...

Please re-post 🙏

How do organelles change over the course of a stem cell’s life?

ADIs @cohenlaboratory.bsky.social, @assafzaritsky.bsky.social , and @mattersoflight.bsky.social are using ML and cell engineering to explore the #FrontierScience of stem cell differentiation.
alleninstitute.org/division/fro...

BIG start to #mmc2025 with Assaf Zaritsky giving an awesome opening plenary.

@royalmicrosoc.bsky.social @eurobioimaging.bsky.social @globias.bsky.social @bioimaginguk.bsky.social @globalbioimaging.bsky.social

Super excited to share our new method: Context-dependent Identification of Spatial Motifs (CISM)! 🚀 A two-step approach for uncovering fine-scale intercellular modules associated with human disease states from single-cell spatial data.

doi.org/10.1101/2025...

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Unveiling crucial insights into nuclear growth in hiPSC colonies. By analyzing 3D timelapse data, our Cell Science team has shown how cell lineage & environment shape cellular behavior.

This timelapse illuminates the height of nuclei from 4μm (turquoise) to 11μm (fuchsia). 🔗👇

MBoC (@ascbiology.bsky.social Society Journal) is Looking for Early-Career Editorial Board Members!

www.ascb.org/society-news...

Submit your application by May 22, 2025!

"This symposium explores the power of microscopy imaging as a data-rich resource for quantifying cellular phenotypes, with a strong focus on high-content imaging techniques such as Cell Painting and their applications in drug discovery and basic cell biology"

cytodata25.eu-openscreen.eu

You want to use LLMs for your research, but don't know what they can be used for? And whether their use is compatible with good scientific practice? Then this introduction by @haesleinhuepf.bsky.social might be the right thing for you.
Find the slides here: zenodo.org/records/1441...

Very happy to share our new preprint "MODIS: Multi-Omics Data Integration for Small and Unpaired Datasets"!
We proposed a new coupled variational auto-encoder architecture to solve the problem of data integration for small and unpaired datasets (diagonal integration)
arxiv.org/abs/2503.18856

Hello, World!