Join our online #ComparativeGenomics course with Ingo & @sedlazeck.bsky.social , 23-27 Feb 2026! Learn genome assembly, variant detection (SNVs & SVs), and functional impact analysis with hands-on sessions.
www.physalia-courses.org/courses-work...
#Bioinformatics #Genomics
www.physalia-courses.org/courses-work...
#Bioinformatics #Genomics
November 5, 2025 at 6:10 PM
Join our online #ComparativeGenomics course with Ingo & @sedlazeck.bsky.social , 23-27 Feb 2026! Learn genome assembly, variant detection (SNVs & SVs), and functional impact analysis with hands-on sessions.
www.physalia-courses.org/courses-work...
#Bioinformatics #Genomics
www.physalia-courses.org/courses-work...
#Bioinformatics #Genomics
Our paper synthesizing discussions from the @embo.org lecture course on Evolutionary and Comparative #Genomics in now out @bioinfoadv.bsky.social
#ComparativeGenomics #GenomeEvolution
#ComparativeGenomics #GenomeEvolution
🧬 Now published in Bioinformatics Advances: “Advances and challenges in understanding evolution through genome comparison.”
Read the full paper here: https://doi.org/10.1093/bioadv/vbaf223
Read the full paper here: https://doi.org/10.1093/bioadv/vbaf223
October 20, 2025 at 12:17 PM
Our paper synthesizing discussions from the @embo.org lecture course on Evolutionary and Comparative #Genomics in now out @bioinfoadv.bsky.social
#ComparativeGenomics #GenomeEvolution
#ComparativeGenomics #GenomeEvolution
Join our online course on Sex Chromosome Evolution (6–10 Oct) with @astridboehne.bsky.social & @idarolti.bsky.social to gain hands-on experience in genomic and transcriptomic analyses.
www.physalia-courses.org/courses-work...
#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
www.physalia-courses.org/courses-work...
#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
Sex chromosome evolution
Dates 6-10 October 2025 To foster international participation, this course will be held online
www.physalia-courses.org
September 17, 2025 at 3:37 PM
Join our online course on Sex Chromosome Evolution (6–10 Oct) with @astridboehne.bsky.social & @idarolti.bsky.social to gain hands-on experience in genomic and transcriptomic analyses.
www.physalia-courses.org/courses-work...
#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
www.physalia-courses.org/courses-work...
#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
The RE protein family, defined by DUF3411, is exclusive to plastid-containing organisms. This suggests an early evolutionary origin, potentially concurrent with the establishment of primary endosymbiosis. 🌍 #EvolutionaryBiology #ComparativeGenomics
August 22, 2025 at 12:03 PM
The RE protein family, defined by DUF3411, is exclusive to plastid-containing organisms. This suggests an early evolutionary origin, potentially concurrent with the establishment of primary endosymbiosis. 🌍 #EvolutionaryBiology #ComparativeGenomics
#DBfeature 🐣
Stage‑matched scRNA‑seq uncovers a “trailblazer” gene network shared between mouse and chick, driving neural crest migration into craniofacial arches.
by J.A. Morrison et al.
www.sciencedirect.com/science/arti...
#EvoDevo #ComparativeGenomics #SingleCell
Stage‑matched scRNA‑seq uncovers a “trailblazer” gene network shared between mouse and chick, driving neural crest migration into craniofacial arches.
by J.A. Morrison et al.
www.sciencedirect.com/science/arti...
#EvoDevo #ComparativeGenomics #SingleCell
August 18, 2025 at 6:22 PM
#DBfeature 🐣
Stage‑matched scRNA‑seq uncovers a “trailblazer” gene network shared between mouse and chick, driving neural crest migration into craniofacial arches.
by J.A. Morrison et al.
www.sciencedirect.com/science/arti...
#EvoDevo #ComparativeGenomics #SingleCell
Stage‑matched scRNA‑seq uncovers a “trailblazer” gene network shared between mouse and chick, driving neural crest migration into craniofacial arches.
by J.A. Morrison et al.
www.sciencedirect.com/science/arti...
#EvoDevo #ComparativeGenomics #SingleCell
This work opens the door to:
1. Better microbial ecology models
2. Engineering beneficial microbes
3. Identifying new virulence or symbiosis factors
Read the preprint & share your thoughts!
#Microbiome #ComparativeGenomics #HostMicrob #PlantMicrobiome #Bioinformatics
www.biorxiv.org/content/10.1...
1. Better microbial ecology models
2. Engineering beneficial microbes
3. Identifying new virulence or symbiosis factors
Read the preprint & share your thoughts!
#Microbiome #ComparativeGenomics #HostMicrob #PlantMicrobiome #Bioinformatics
www.biorxiv.org/content/10.1...
The Genetic Basis of Bacterial Adaptation to Hosts
Microbes colonize and interact with diverse multicellular hosts using specialized genes, many of which remain unidentified. Better understanding of host-associated gene functions is a key aspect of mi...
www.biorxiv.org
July 21, 2025 at 6:40 AM
This work opens the door to:
1. Better microbial ecology models
2. Engineering beneficial microbes
3. Identifying new virulence or symbiosis factors
Read the preprint & share your thoughts!
#Microbiome #ComparativeGenomics #HostMicrob #PlantMicrobiome #Bioinformatics
www.biorxiv.org/content/10.1...
1. Better microbial ecology models
2. Engineering beneficial microbes
3. Identifying new virulence or symbiosis factors
Read the preprint & share your thoughts!
#Microbiome #ComparativeGenomics #HostMicrob #PlantMicrobiome #Bioinformatics
www.biorxiv.org/content/10.1...
A human-specific mutation weakens FasL, a key immune weapon against solid tumors. Blocking plasmin or shielding FasL restores cancer-fighting power. Evolution may have traded resilience for complexity. #CancerResearch #Immunotherapy #HumanEvolution #ComparativeGenomics
A Genetic Tradeoff: How an Evolutionary Mutation in Human Fas Ligand Might Explain Cancer Vulnerability
Why chimpanzees dodge solid tumors better than we do, and what that reveals about our immune past
www.anthropology.net
July 9, 2025 at 1:51 PM
A human-specific mutation weakens FasL, a key immune weapon against solid tumors. Blocking plasmin or shielding FasL restores cancer-fighting power. Evolution may have traded resilience for complexity. #CancerResearch #Immunotherapy #HumanEvolution #ComparativeGenomics
🚀 Mini-symposium at JOBIM 2025: Biodiversity Genomics
Join us on July 10 in Bordeaux to explore how large-scale sequencing projects are reshaping comparative genomics and our understanding of biodiversity.
www.atlasea.fr/mini-symposi...
#Genomics #Biodiversity #ComparativeGenomics #JOBIM2025
Join us on July 10 in Bordeaux to explore how large-scale sequencing projects are reshaping comparative genomics and our understanding of biodiversity.
www.atlasea.fr/mini-symposi...
#Genomics #Biodiversity #ComparativeGenomics #JOBIM2025
Mini-symposium JOBIM 2025 : La génomique de la biodiversité – ATLASea
www.atlasea.fr
June 30, 2025 at 9:45 AM
🚀 Mini-symposium at JOBIM 2025: Biodiversity Genomics
Join us on July 10 in Bordeaux to explore how large-scale sequencing projects are reshaping comparative genomics and our understanding of biodiversity.
www.atlasea.fr/mini-symposi...
#Genomics #Biodiversity #ComparativeGenomics #JOBIM2025
Join us on July 10 in Bordeaux to explore how large-scale sequencing projects are reshaping comparative genomics and our understanding of biodiversity.
www.atlasea.fr/mini-symposi...
#Genomics #Biodiversity #ComparativeGenomics #JOBIM2025
Our @nisbetalice.bsky.social, @emmabeansworth.bsky.social & @gemma-langridge.bsky.social are having a magnifique time at #I3S. Currently they are enjoying talks in the #comparativegenomics session where Emma will also present her poster (102) showing genome rearrangement can impact #virulence & #AMR
June 24, 2025 at 12:45 PM
Our @nisbetalice.bsky.social, @emmabeansworth.bsky.social & @gemma-langridge.bsky.social are having a magnifique time at #I3S. Currently they are enjoying talks in the #comparativegenomics session where Emma will also present her poster (102) showing genome rearrangement can impact #virulence & #AMR
🐢Slow & steady strides to decoding longevity!🐢
Dovetail’s Omni-C tech helped scaffold T2T genomes of 2 tortoises, including Jonathan—the world’s oldest land animal (192 yrs).
Enabling:
-Structural variant mapping
-Repeat/telomere placement
-Context for methylation/expression
#ComparativeGenomics
Dovetail’s Omni-C tech helped scaffold T2T genomes of 2 tortoises, including Jonathan—the world’s oldest land animal (192 yrs).
Enabling:
-Structural variant mapping
-Repeat/telomere placement
-Context for methylation/expression
#ComparativeGenomics
June 17, 2025 at 5:27 PM
🐢Slow & steady strides to decoding longevity!🐢
Dovetail’s Omni-C tech helped scaffold T2T genomes of 2 tortoises, including Jonathan—the world’s oldest land animal (192 yrs).
Enabling:
-Structural variant mapping
-Repeat/telomere placement
-Context for methylation/expression
#ComparativeGenomics
Dovetail’s Omni-C tech helped scaffold T2T genomes of 2 tortoises, including Jonathan—the world’s oldest land animal (192 yrs).
Enabling:
-Structural variant mapping
-Repeat/telomere placement
-Context for methylation/expression
#ComparativeGenomics
(2/3) 🌍 By sequencing the genomes of over 240 mammalian species, scientists can identify conserved genes — the ancient, unchanging parts of DNA that reveal what’s truly essential for life. 🧬
#ZoonomiaProject #ComparativeGenomics #Evolution #GenomeScience #Biodiversity #HumanHealth #Conservation
#ZoonomiaProject #ComparativeGenomics #Evolution #GenomeScience #Biodiversity #HumanHealth #Conservation
June 12, 2025 at 6:07 PM
(2/3) 🌍 By sequencing the genomes of over 240 mammalian species, scientists can identify conserved genes — the ancient, unchanging parts of DNA that reveal what’s truly essential for life. 🧬
#ZoonomiaProject #ComparativeGenomics #Evolution #GenomeScience #Biodiversity #HumanHealth #Conservation
#ZoonomiaProject #ComparativeGenomics #Evolution #GenomeScience #Biodiversity #HumanHealth #Conservation
(1/3) 🌍 EBP’s Zoonomia Project (zoonomiaproject.org) is transforming how we understand both biodiversity and human health!
#Zoonomia #Science Article 2023:
www.science.org/doi/10.1126/...
www.sciencenews.org/article/find...
#ComparativeGenomics #ZoonomiaProject #Evolution #Conservation
#Zoonomia #Science Article 2023:
www.science.org/doi/10.1126/...
www.sciencenews.org/article/find...
#ComparativeGenomics #ZoonomiaProject #Evolution #Conservation
June 12, 2025 at 5:58 PM
(1/3) 🌍 EBP’s Zoonomia Project (zoonomiaproject.org) is transforming how we understand both biodiversity and human health!
#Zoonomia #Science Article 2023:
www.science.org/doi/10.1126/...
www.sciencenews.org/article/find...
#ComparativeGenomics #ZoonomiaProject #Evolution #Conservation
#Zoonomia #Science Article 2023:
www.science.org/doi/10.1126/...
www.sciencenews.org/article/find...
#ComparativeGenomics #ZoonomiaProject #Evolution #Conservation
Delighted to share our latest scientific article (doi.org/10.1080/2150...) about #comparativegenomics of #Salmonella enterica serovars Paratyphi A, Typhi and Typhimurium reveals distinct profiles of their #pangenome, mobile genetic elements, #antimicrobialresistance and defense systems repertoire.
June 4, 2025 at 3:35 PM
Delighted to share our latest scientific article (doi.org/10.1080/2150...) about #comparativegenomics of #Salmonella enterica serovars Paratyphi A, Typhi and Typhimurium reveals distinct profiles of their #pangenome, mobile genetic elements, #antimicrobialresistance and defense systems repertoire.
NCBI’s new Comparative Genome Viewer is seriously cool!
Using our tropical abalone genome assembly www.nature.com/articles/s41..., you can now explore synteny, structural variation & gene rearrangements in abalone.
Try it out:
www.ncbi.nlm.nih.gov/cgv/browse/G...
#ComparativeGenomics #NCBI
Using our tropical abalone genome assembly www.nature.com/articles/s41..., you can now explore synteny, structural variation & gene rearrangements in abalone.
Try it out:
www.ncbi.nlm.nih.gov/cgv/browse/G...
#ComparativeGenomics #NCBI
Chromosome-scale genome assembly of the tropical abalone (Haliotis asinina) - Scientific Data
Scientific Data - Chromosome-scale genome assembly of the tropical abalone (Haliotis asinina)
www.nature.com
June 3, 2025 at 10:22 AM
NCBI’s new Comparative Genome Viewer is seriously cool!
Using our tropical abalone genome assembly www.nature.com/articles/s41..., you can now explore synteny, structural variation & gene rearrangements in abalone.
Try it out:
www.ncbi.nlm.nih.gov/cgv/browse/G...
#ComparativeGenomics #NCBI
Using our tropical abalone genome assembly www.nature.com/articles/s41..., you can now explore synteny, structural variation & gene rearrangements in abalone.
Try it out:
www.ncbi.nlm.nih.gov/cgv/browse/G...
#ComparativeGenomics #NCBI
Missed one of the latest #ERGA BioGenome #Analysis and #Applications seminars? Catch up on all sessions on the ERGA YouTube Channel!
📽️ youtube.com/playlist?lis...
Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
📽️ youtube.com/playlist?lis...
Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
ERGA BioGenome Analysis & Applications Seminars - YouTube
https://www.erga-biodiversity.eu/post/erga-biogenome-analysis-and-applications-seminars
youtube.com
May 30, 2025 at 2:10 PM
Missed one of the latest #ERGA BioGenome #Analysis and #Applications seminars? Catch up on all sessions on the ERGA YouTube Channel!
📽️ youtube.com/playlist?lis...
Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
📽️ youtube.com/playlist?lis...
Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
Loving the energy in my #ComparativeGenomics & #SingleCell omics class at @ucriverside.bsky.social
Fun activities to learn functional orthologs across species & single-cell sequencing reads!
This week: a deep dive into gene expression evolution preprint
👇
biorxiv.org/content/10.1...
Fun activities to learn functional orthologs across species & single-cell sequencing reads!
This week: a deep dive into gene expression evolution preprint
👇
biorxiv.org/content/10.1...
April 16, 2025 at 10:57 PM
Loving the energy in my #ComparativeGenomics & #SingleCell omics class at @ucriverside.bsky.social
Fun activities to learn functional orthologs across species & single-cell sequencing reads!
This week: a deep dive into gene expression evolution preprint
👇
biorxiv.org/content/10.1...
Fun activities to learn functional orthologs across species & single-cell sequencing reads!
This week: a deep dive into gene expression evolution preprint
👇
biorxiv.org/content/10.1...
#comparativegenomics
#evolution
“This resource serves as a comprehensive baseline for future evolutionary studies of humans and our closest living ape relatives."
A cornucopia: new genes, surprises (for me), evolutionary rearrangements, much more and even a T2T pangenome browser.
👏 & 🙏for
1/2
#evolution
“This resource serves as a comprehensive baseline for future evolutionary studies of humans and our closest living ape relatives."
A cornucopia: new genes, surprises (for me), evolutionary rearrangements, much more and even a T2T pangenome browser.
👏 & 🙏for
1/2
Complete sequencing of ape genomes - Nature
Complete sequences of chromosomes telomere-to-telomere from chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan and siamang provide a comprehensive and valuable resource for future evol...
www.nature.com
April 9, 2025 at 7:28 PM
#comparativegenomics
#evolution
“This resource serves as a comprehensive baseline for future evolutionary studies of humans and our closest living ape relatives."
A cornucopia: new genes, surprises (for me), evolutionary rearrangements, much more and even a T2T pangenome browser.
👏 & 🙏for
1/2
#evolution
“This resource serves as a comprehensive baseline for future evolutionary studies of humans and our closest living ape relatives."
A cornucopia: new genes, surprises (for me), evolutionary rearrangements, much more and even a T2T pangenome browser.
👏 & 🙏for
1/2
We identified novel human-biased genes and epigenetic signatures and further validated them using cortical organoids and MPRA data to generate a set of highly confident putative enhancers - paving the way for future functional studies of human brain development.
#ComparativeGenomics
#ComparativeGenomics
March 13, 2025 at 9:59 AM
We identified novel human-biased genes and epigenetic signatures and further validated them using cortical organoids and MPRA data to generate a set of highly confident putative enhancers - paving the way for future functional studies of human brain development.
#ComparativeGenomics
#ComparativeGenomics
We have a #ComparativeGenomics #bioinformatics Postdoctoral position available jointly at the Barcelona Supercomputing Center and RMIT University lnkd.in/e_cbDBER
Submit your application by 3 April 2025 at auspire.eu
Submit your application by 3 April 2025 at auspire.eu
February 10, 2025 at 7:00 PM
We have a #ComparativeGenomics #bioinformatics Postdoctoral position available jointly at the Barcelona Supercomputing Center and RMIT University lnkd.in/e_cbDBER
Submit your application by 3 April 2025 at auspire.eu
Submit your application by 3 April 2025 at auspire.eu
False positive rates in studies of gene birth/death dynamics are documented to be exceptionally high. If you just pull primary transcripts for 100 species & chuck it into CAFE pipeline, you're likely grossly overestimating lineage specific dyanmics #genomics #comparativegenomics #evolution
January 21, 2025 at 9:19 AM
False positive rates in studies of gene birth/death dynamics are documented to be exceptionally high. If you just pull primary transcripts for 100 species & chuck it into CAFE pipeline, you're likely grossly overestimating lineage specific dyanmics #genomics #comparativegenomics #evolution
Missed last year’s #ERGA BioGenome #Analysis and #Applications seminars? Catch up on all 10 sessions on our channel! 📺 Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
Watch now: youtube.com/playlist?lis...
Subscribe and stay updated! 🧬
Watch now: youtube.com/playlist?lis...
Subscribe and stay updated! 🧬
ERGA BioGenome Analysis & Applications Seminars - YouTube
https://www.erga-biodiversity.eu/post/erga-biogenome-analysis-and-applications-seminars
youtube.com
January 10, 2025 at 8:50 AM
Missed last year’s #ERGA BioGenome #Analysis and #Applications seminars? Catch up on all 10 sessions on our channel! 📺 Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
Watch now: youtube.com/playlist?lis...
Subscribe and stay updated! 🧬
Watch now: youtube.com/playlist?lis...
Subscribe and stay updated! 🧬
Passing this along to our Galaxy and BRC communities: NCBI is holding a webinar for researchers in the eukaryotic pathogen and desease vector spaces on Feb 12. Use this link to get more information ow.ly/GAlW50UAuR9
#NCBICGR
#ComparativeGenomics
#NCBICGR
#ComparativeGenomics
Webinar: NCBI support for scientists researching eukaryotic pathogens and disease vectors - NCBI Insights
NCBI is a valuable source for genomic data for an extensive breadth of organisms. The NIH Comparative Genomics Resource (CGR) was established to help facilitate reliable comparative genomics research ...
ow.ly
January 8, 2025 at 7:33 PM
Passing this along to our Galaxy and BRC communities: NCBI is holding a webinar for researchers in the eukaryotic pathogen and desease vector spaces on Feb 12. Use this link to get more information ow.ly/GAlW50UAuR9
#NCBICGR
#ComparativeGenomics
#NCBICGR
#ComparativeGenomics
Passing this along to our Galaxy and BRC communities: NCBI is holding a webinar for researchers in the eukaryotic pathogen and desease vector spaces on Feb 12. Use this link to get more information ow.ly/GAlW50UAuR9
#NCBICGR
#ComparativeGenomics
#NCBICGR
#ComparativeGenomics
Webinar: NCBI support for scientists researching eukaryotic pathogens and disease vectors - NCBI Insights
NCBI is a valuable source for genomic data for an extensive breadth of organisms. The NIH Comparative Genomics Resource (CGR) was established to help facilitate reliable comparative genomics research ...
ow.ly
January 8, 2025 at 6:50 PM
Passing this along to our Galaxy and BRC communities: NCBI is holding a webinar for researchers in the eukaryotic pathogen and desease vector spaces on Feb 12. Use this link to get more information ow.ly/GAlW50UAuR9
#NCBICGR
#ComparativeGenomics
#NCBICGR
#ComparativeGenomics
New #OpenAccess tool for #WeedGenomics, #HerbicideResistance, and #ComparativeGenomics. Chromosome-scale genome assembly for Alopecurus aequalis - rdcu.be/d335n
@rothamsted.bsky.social @earlhaminst.bsky.social @jonwright99.bsky.social @gemygk.bsky.social @ergabiodiv.bsky.social and all 24 authors!
@rothamsted.bsky.social @earlhaminst.bsky.social @jonwright99.bsky.social @gemygk.bsky.social @ergabiodiv.bsky.social and all 24 authors!
Chromosome-scale genome assembly and de novo annotation of Alopecurus aequalis
Scientific Data - Chromosome-scale genome assembly and de novo annotation of Alopecurus aequalis
rdcu.be
December 19, 2024 at 4:13 PM
New #OpenAccess tool for #WeedGenomics, #HerbicideResistance, and #ComparativeGenomics. Chromosome-scale genome assembly for Alopecurus aequalis - rdcu.be/d335n
@rothamsted.bsky.social @earlhaminst.bsky.social @jonwright99.bsky.social @gemygk.bsky.social @ergabiodiv.bsky.social and all 24 authors!
@rothamsted.bsky.social @earlhaminst.bsky.social @jonwright99.bsky.social @gemygk.bsky.social @ergabiodiv.bsky.social and all 24 authors!
Microbial Genomics and Metagenomics (MGM) Workshop
Learn all about IMG/M and other @jgi.doe.gov data systems for #microbiology #metagenomics #microbiome #bioinformatics #comparativegenomics at our 5-day workshop
April 28-May 2, 2025 in Berkeley
Registration is now open: mgm.jgi.doe.gov
Learn all about IMG/M and other @jgi.doe.gov data systems for #microbiology #metagenomics #microbiome #bioinformatics #comparativegenomics at our 5-day workshop
April 28-May 2, 2025 in Berkeley
Registration is now open: mgm.jgi.doe.gov
December 17, 2024 at 7:28 PM
Microbial Genomics and Metagenomics (MGM) Workshop
Learn all about IMG/M and other @jgi.doe.gov data systems for #microbiology #metagenomics #microbiome #bioinformatics #comparativegenomics at our 5-day workshop
April 28-May 2, 2025 in Berkeley
Registration is now open: mgm.jgi.doe.gov
Learn all about IMG/M and other @jgi.doe.gov data systems for #microbiology #metagenomics #microbiome #bioinformatics #comparativegenomics at our 5-day workshop
April 28-May 2, 2025 in Berkeley
Registration is now open: mgm.jgi.doe.gov