CLIF advances ICU data harmonisation but lacks standard terminologies, flexible structure and automation. Aligning with OMOP, HL7-FHIR and INDICATE could improve interoperability, scalability and support broader adoption in critical care research. zurl.co/YpK0f
July 12, 2025 at 8:00 AM
CLIF advances ICU data harmonisation but lacks standard terminologies, flexible structure and automation. Aligning with OMOP, HL7-FHIR and INDICATE could improve interoperability, scalability and support broader adoption in critical care research. zurl.co/YpK0f
extraction, we utilized GMV's NLP tool uQuery, which excels at identifying relevant entities in clinical texts and converting them into standardized formats such as SNOMED and OMOP. uQuery not only detects and classifies entities but also associates [4/8 of https://arxiv.org/abs/2505.09794v1]
May 16, 2025 at 5:56 AM
extraction, we utilized GMV's NLP tool uQuery, which excels at identifying relevant entities in clinical texts and converting them into standardized formats such as SNOMED and OMOP. uQuery not only detects and classifies entities but also associates [4/8 of https://arxiv.org/abs/2505.09794v1]
Evolution of the volume, structure & content of Estonian HL7 CDA R2 records (2012 – 2019) — Implications for OMOP CDM ETL #OHDSISocialShowcase #JoinTheJourney
Lead: Harry-Anton Talvik
Co-Author: Sulev Reisberg
Poster: https://loom.ly/MmubfsA
Lead: Harry-Anton Talvik
Co-Author: Sulev Reisberg
Poster: https://loom.ly/MmubfsA
September 17, 2025 at 8:02 AM
Evolution of the volume, structure & content of Estonian HL7 CDA R2 records (2012 – 2019) — Implications for OMOP CDM ETL #OHDSISocialShowcase #JoinTheJourney
Lead: Harry-Anton Talvik
Co-Author: Sulev Reisberg
Poster: https://loom.ly/MmubfsA
Lead: Harry-Anton Talvik
Co-Author: Sulev Reisberg
Poster: https://loom.ly/MmubfsA
Adaptation of the OMOP Common Data Model for Secondary Use of Public Databases on the Japanese Healthcare Information Platform #OHDSISocialShowcase
Lead: Takanori Yamashita
Team: E Kimura, Y Aoyagi, H Okamura, E Matsuki, T Hiramatsu
🔗 https://www.ohdsi.org/2025showcase-135
#JoinTheJourney
Lead: Takanori Yamashita
Team: E Kimura, Y Aoyagi, H Okamura, E Matsuki, T Hiramatsu
🔗 https://www.ohdsi.org/2025showcase-135
#JoinTheJourney
January 13, 2026 at 2:04 PM
Adaptation of the OMOP Common Data Model for Secondary Use of Public Databases on the Japanese Healthcare Information Platform #OHDSISocialShowcase
Lead: Takanori Yamashita
Team: E Kimura, Y Aoyagi, H Okamura, E Matsuki, T Hiramatsu
🔗 https://www.ohdsi.org/2025showcase-135
#JoinTheJourney
Lead: Takanori Yamashita
Team: E Kimura, Y Aoyagi, H Okamura, E Matsuki, T Hiramatsu
🔗 https://www.ohdsi.org/2025showcase-135
#JoinTheJourney
We are at the #SWAT4HCLS 🚀!
Jordi Rambla, Team Leader of the @egaarchive.bsky.social - @crg.eu, just presented "From Clinical Data to Discovery: integration of Beacon v2 with OMOP-CDM"
Find more information here ↘️
swat4ls.org/workshops/ba...
Jordi Rambla, Team Leader of the @egaarchive.bsky.social - @crg.eu, just presented "From Clinical Data to Discovery: integration of Beacon v2 with OMOP-CDM"
Find more information here ↘️
swat4ls.org/workshops/ba...
February 25, 2025 at 11:43 AM
We are at the #SWAT4HCLS 🚀!
Jordi Rambla, Team Leader of the @egaarchive.bsky.social - @crg.eu, just presented "From Clinical Data to Discovery: integration of Beacon v2 with OMOP-CDM"
Find more information here ↘️
swat4ls.org/workshops/ba...
Jordi Rambla, Team Leader of the @egaarchive.bsky.social - @crg.eu, just presented "From Clinical Data to Discovery: integration of Beacon v2 with OMOP-CDM"
Find more information here ↘️
swat4ls.org/workshops/ba...
Exploring Stroke and Cognitive Impaired Patients Using Apache Superset on OMOP OHDSI Dataset #OHDSISocialShowcase
Lead: Muhammad Solihuddin Muhtar
Team: Phung Anh (Alex) Nguyen, Jason C. Hsu, Min-Huei Hsu
➡️ https://loom.ly/aSAHnMQ
#JoinTheJourney
Lead: Muhammad Solihuddin Muhtar
Team: Phung Anh (Alex) Nguyen, Jason C. Hsu, Min-Huei Hsu
➡️ https://loom.ly/aSAHnMQ
#JoinTheJourney
June 27, 2025 at 1:07 PM
Exploring Stroke and Cognitive Impaired Patients Using Apache Superset on OMOP OHDSI Dataset #OHDSISocialShowcase
Lead: Muhammad Solihuddin Muhtar
Team: Phung Anh (Alex) Nguyen, Jason C. Hsu, Min-Huei Hsu
➡️ https://loom.ly/aSAHnMQ
#JoinTheJourney
Lead: Muhammad Solihuddin Muhtar
Team: Phung Anh (Alex) Nguyen, Jason C. Hsu, Min-Huei Hsu
➡️ https://loom.ly/aSAHnMQ
#JoinTheJourney
OHDSI UK 2024 Poster #13 "Enhancing Hematologic Oncology Data Capture in the OMOP CDM: Methodological Advances and Challenges" by Clara L. Oeste from LynxCare
#OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
#OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
January 28, 2025 at 2:29 PM
OHDSI UK 2024 Poster #13 "Enhancing Hematologic Oncology Data Capture in the OMOP CDM: Methodological Advances and Challenges" by Clara L. Oeste from LynxCare
#OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
#OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
GRASP transfers well across datasets mapped to different data models accurately predicting disease risk from ICD-10-CM codes without direct mappings to OMOP.
So even if the model is trained and tested using different ontologies/vocabularies, GRASP still works.
So even if the model is trained and tested using different ontologies/vocabularies, GRASP still works.
February 5, 2025 at 10:04 AM
GRASP transfers well across datasets mapped to different data models accurately predicting disease risk from ICD-10-CM codes without direct mappings to OMOP.
So even if the model is trained and tested using different ontologies/vocabularies, GRASP still works.
So even if the model is trained and tested using different ontologies/vocabularies, GRASP still works.
Experiences with the development of an EORTC source vocabulary to represent QoL questionnaire data in OMOP #OHDSISocialShowcase #JoinTheJourney
Lead: Vlad Korsik
Team: M Rahozhkina, S van Sandijk, P Prinsen, M Van Hemelrijck, C Moss
Poster: https://loom.ly/5gjg1NY
Lead: Vlad Korsik
Team: M Rahozhkina, S van Sandijk, P Prinsen, M Van Hemelrijck, C Moss
Poster: https://loom.ly/5gjg1NY
September 18, 2025 at 8:01 AM
Experiences with the development of an EORTC source vocabulary to represent QoL questionnaire data in OMOP #OHDSISocialShowcase #JoinTheJourney
Lead: Vlad Korsik
Team: M Rahozhkina, S van Sandijk, P Prinsen, M Van Hemelrijck, C Moss
Poster: https://loom.ly/5gjg1NY
Lead: Vlad Korsik
Team: M Rahozhkina, S van Sandijk, P Prinsen, M Van Hemelrijck, C Moss
Poster: https://loom.ly/5gjg1NY
Carrot Top – A tool for OMOP Transformation Reliability Support #OHDSISocialShowcase
Lead: Esmond Urwin
Team: Andrew Rae, Tri Thien Nguyen, Tim Beck, Grazziela Figueredo, Philip Quinlan
🔗 https://loom.ly/RVjP4FU
#JoinTheJourney
Lead: Esmond Urwin
Team: Andrew Rae, Tri Thien Nguyen, Tim Beck, Grazziela Figueredo, Philip Quinlan
🔗 https://loom.ly/RVjP4FU
#JoinTheJourney
October 9, 2025 at 1:08 PM
Carrot Top – A tool for OMOP Transformation Reliability Support #OHDSISocialShowcase
Lead: Esmond Urwin
Team: Andrew Rae, Tri Thien Nguyen, Tim Beck, Grazziela Figueredo, Philip Quinlan
🔗 https://loom.ly/RVjP4FU
#JoinTheJourney
Lead: Esmond Urwin
Team: Andrew Rae, Tri Thien Nguyen, Tim Beck, Grazziela Figueredo, Philip Quinlan
🔗 https://loom.ly/RVjP4FU
#JoinTheJourney
Leveraging Large Language Model for Populating OMOP Oncology CDM from the EHR: Feasibility Study #OHDSISocialShowcase
Lead: Subin Kim
Team: Jeong Eun Choi, Chang Jun Ko, Seng Chan You
➡️ https://loom.ly/vHADRaQ
#JoinTheJourney
Lead: Subin Kim
Team: Jeong Eun Choi, Chang Jun Ko, Seng Chan You
➡️ https://loom.ly/vHADRaQ
#JoinTheJourney
June 26, 2025 at 1:05 PM
Leveraging Large Language Model for Populating OMOP Oncology CDM from the EHR: Feasibility Study #OHDSISocialShowcase
Lead: Subin Kim
Team: Jeong Eun Choi, Chang Jun Ko, Seng Chan You
➡️ https://loom.ly/vHADRaQ
#JoinTheJourney
Lead: Subin Kim
Team: Jeong Eun Choi, Chang Jun Ko, Seng Chan You
➡️ https://loom.ly/vHADRaQ
#JoinTheJourney
OHDSI UK 2024 Poster #9 "Forecasting the prescription rates of antibiotics in the UK between 2013 to 2023 incorporating the impact of COVID-19" by Marta Pineda-Moncusi et al. from @ndorms.bsky.social @daniprietoalhambra.bsky.social #OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
January 24, 2025 at 4:37 PM
OHDSI UK 2024 Poster #9 "Forecasting the prescription rates of antibiotics in the UK between 2013 to 2023 incorporating the impact of COVID-19" by Marta Pineda-Moncusi et al. from @ndorms.bsky.social @daniprietoalhambra.bsky.social #OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
🚀 Pioneering South-South collaboration seminar
CIDACS (Brazil) + WC-PHDC (South Africa) federated analysis
🔬 Maternal health data + OMOP common data model
🔒 No data transfer needed
🌐 Translation PT/EN/ES
8+ world-class speakers
Register bit.ly/mcdwebinar
#DataScience #MaternalHealth
CIDACS (Brazil) + WC-PHDC (South Africa) federated analysis
🔬 Maternal health data + OMOP common data model
🔒 No data transfer needed
🌐 Translation PT/EN/ES
8+ world-class speakers
Register bit.ly/mcdwebinar
#DataScience #MaternalHealth
June 9, 2025 at 12:00 PM
🚀 Pioneering South-South collaboration seminar
CIDACS (Brazil) + WC-PHDC (South Africa) federated analysis
🔬 Maternal health data + OMOP common data model
🔒 No data transfer needed
🌐 Translation PT/EN/ES
8+ world-class speakers
Register bit.ly/mcdwebinar
#DataScience #MaternalHealth
CIDACS (Brazil) + WC-PHDC (South Africa) federated analysis
🔬 Maternal health data + OMOP common data model
🔒 No data transfer needed
🌐 Translation PT/EN/ES
8+ world-class speakers
Register bit.ly/mcdwebinar
#DataScience #MaternalHealth
RIANA Dashboard: A Blockchain-Enabled Approach for Representing AI Model Intent in OMOP with Atlas-Like Functionality #OHDSISocialShowcase
Lead: Frederic Jung
Full team listed on poster ⬇️
🔗 https://loom.ly/3M0TRPU
#JoinTheJourney
Lead: Frederic Jung
Full team listed on poster ⬇️
🔗 https://loom.ly/3M0TRPU
#JoinTheJourney
September 2, 2025 at 8:01 AM
RIANA Dashboard: A Blockchain-Enabled Approach for Representing AI Model Intent in OMOP with Atlas-Like Functionality #OHDSISocialShowcase
Lead: Frederic Jung
Full team listed on poster ⬇️
🔗 https://loom.ly/3M0TRPU
#JoinTheJourney
Lead: Frederic Jung
Full team listed on poster ⬇️
🔗 https://loom.ly/3M0TRPU
#JoinTheJourney
Harmonization of NAJS DWH to the OMOP CDM #OHDSISocialShowcase #JoinTheJourney
Lead: Marko Čavlina
Team: Antea Jezidžić, Karlo Pintarić, Pero Ivanko
🔗 https://loom.ly/eO0D91o
Lead: Marko Čavlina
Team: Antea Jezidžić, Karlo Pintarić, Pero Ivanko
🔗 https://loom.ly/eO0D91o
November 13, 2025 at 9:01 AM
Harmonization of NAJS DWH to the OMOP CDM #OHDSISocialShowcase #JoinTheJourney
Lead: Marko Čavlina
Team: Antea Jezidžić, Karlo Pintarić, Pero Ivanko
🔗 https://loom.ly/eO0D91o
Lead: Marko Čavlina
Team: Antea Jezidžić, Karlo Pintarić, Pero Ivanko
🔗 https://loom.ly/eO0D91o
Kineret - The largest Israeli chain of hospitals data available now in OMOP common data model format enabling broad collaborative research https://www.medrxiv.org/content/10.1101/2025.07.04.25330663v1
July 14, 2025 at 3:41 PM
Kineret - The largest Israeli chain of hospitals data available now in OMOP common data model format enabling broad collaborative research https://www.medrxiv.org/content/10.1101/2025.07.04.25330663v1
📚 The EHDEN Academy is your go-to e-learning hub for mastering #OMOP CDM & OHDSI tools.
Developed by the European Health Data & Evidence Network, it empowers stakeholders across #RWD & #RWE projects.
Explore now 👉 academy.ehden.eu
#EHDEN #OHDSI #HealthData #DataScience
Developed by the European Health Data & Evidence Network, it empowers stakeholders across #RWD & #RWE projects.
Explore now 👉 academy.ehden.eu
#EHDEN #OHDSI #HealthData #DataScience
EHDEN Academy
academy.ehden.eu
June 3, 2025 at 3:56 PM
📚 The EHDEN Academy is your go-to e-learning hub for mastering #OMOP CDM & OHDSI tools.
Developed by the European Health Data & Evidence Network, it empowers stakeholders across #RWD & #RWE projects.
Explore now 👉 academy.ehden.eu
#EHDEN #OHDSI #HealthData #DataScience
Developed by the European Health Data & Evidence Network, it empowers stakeholders across #RWD & #RWE projects.
Explore now 👉 academy.ehden.eu
#EHDEN #OHDSI #HealthData #DataScience
Enhancing Semantic Interoperability in Precision Medicine: Converting OMOP CDM to Beacon v2 in the Spanish IMPaCT- Data Project https://www.medrxiv.org/content/10.1101/2024.12.25.24319606v1
December 28, 2024 at 10:41 AM
Enhancing Semantic Interoperability in Precision Medicine: Converting OMOP CDM to Beacon v2 in the Spanish IMPaCT- Data Project https://www.medrxiv.org/content/10.1101/2024.12.25.24319606v1
Characterisation of Data Sources in the HEalth data Real World Evidence OMOP Network (HERON UK) #OHDSISocialShowcase
Lead: Cecilia Campanile
Full team listed on poster ⬇️
🔗 https://loom.ly/LHNaS5Q
#JoinTheJourney
Lead: Cecilia Campanile
Full team listed on poster ⬇️
🔗 https://loom.ly/LHNaS5Q
#JoinTheJourney
August 5, 2025 at 1:06 PM
Characterisation of Data Sources in the HEalth data Real World Evidence OMOP Network (HERON UK) #OHDSISocialShowcase
Lead: Cecilia Campanile
Full team listed on poster ⬇️
🔗 https://loom.ly/LHNaS5Q
#JoinTheJourney
Lead: Cecilia Campanile
Full team listed on poster ⬇️
🔗 https://loom.ly/LHNaS5Q
#JoinTheJourney
The authors reaffirm CLIF’s scalability and complementarity with OMOP and INDICATE, citing over ten ICU teams and 800,000 admissions, while supporting integration with standard codes and mixed table formats for efficient critical care data use. zurl.co/4S2cQ
August 7, 2025 at 8:00 AM
The authors reaffirm CLIF’s scalability and complementarity with OMOP and INDICATE, citing over ten ICU teams and 800,000 admissions, while supporting integration with standard codes and mixed table formats for efficient critical care data use. zurl.co/4S2cQ
OMOP model evaluation for representing GENIE oncology research project data #OHDSISocialShowcase
Lead: Vojtech Huser
Co-Author: Sebastian van Sandijk
🔗 https://loom.ly/qYtOGWU
This research kicks off our social showcase from #OHDSIEurope2025! #JoinTheJourney
Lead: Vojtech Huser
Co-Author: Sebastian van Sandijk
🔗 https://loom.ly/qYtOGWU
This research kicks off our social showcase from #OHDSIEurope2025! #JoinTheJourney
July 22, 2025 at 1:06 PM
OMOP model evaluation for representing GENIE oncology research project data #OHDSISocialShowcase
Lead: Vojtech Huser
Co-Author: Sebastian van Sandijk
🔗 https://loom.ly/qYtOGWU
This research kicks off our social showcase from #OHDSIEurope2025! #JoinTheJourney
Lead: Vojtech Huser
Co-Author: Sebastian van Sandijk
🔗 https://loom.ly/qYtOGWU
This research kicks off our social showcase from #OHDSIEurope2025! #JoinTheJourney
Rx Norm for Europe - Toward the representation of medicinal products in the OMOP CDM: Graph visualization and validation of two mapping approaches using the OHDSI USAGI tool and LLM https://www.medrxiv.org/content/10.64898/2026.01.15.26344216v1
January 17, 2026 at 11:40 PM
Rx Norm for Europe - Toward the representation of medicinal products in the OMOP CDM: Graph visualization and validation of two mapping approaches using the OHDSI USAGI tool and LLM https://www.medrxiv.org/content/10.64898/2026.01.15.26344216v1
OHDSI UK 2024 Poster #5 "Integrating OMOP data into daily monitoring of Sepsis patients" by Quin Ashcroft from Lancashire Teaching Hospitals #OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
January 20, 2025 at 5:38 PM
OHDSI UK 2024 Poster #5 "Integrating OMOP data into daily monitoring of Sepsis patients" by Quin Ashcroft from Lancashire Teaching Hospitals #OHDSIUK24 #OMOP #Posters #RWE ukhealthdata.org/wp-content/u...
Hey #medsky, #healthsky, #publicHealth, #healthtech and #healthpolicy folks:
Working within OHDSI (ohdsi.org/), using OHDSI tools or OMOP CDM data, and doing research in observational health? Let's connect!
I want to see the observational health community keep growing here!
Working within OHDSI (ohdsi.org/), using OHDSI tools or OMOP CDM data, and doing research in observational health? Let's connect!
I want to see the observational health community keep growing here!
November 17, 2024 at 8:18 PM
Hey #medsky, #healthsky, #publicHealth, #healthtech and #healthpolicy folks:
Working within OHDSI (ohdsi.org/), using OHDSI tools or OMOP CDM data, and doing research in observational health? Let's connect!
I want to see the observational health community keep growing here!
Working within OHDSI (ohdsi.org/), using OHDSI tools or OMOP CDM data, and doing research in observational health? Let's connect!
I want to see the observational health community keep growing here!