Matthew Witney
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virotuned.bsky.social
Matthew Witney
@virotuned.bsky.social
#postdoc at the Purcell Lab, #monashuni, #BDI

#antigenpresentation, #MHC, #immunopeptidomics, #Tcells and a smattering of #classicalmusic
Reposted by Matthew Witney
ALSO! We are hiring for the last open position (Bioinformatics Research Scientist) in the TIRTL group! Love coding, math, robotics, and uncovering the immune system's secrets? You know you do, so join us! (stjude.wd1.myworkdayjobs.com/stjude/job/M...).
Bioinformatics Research Scientist (TIRTL Bluesky)
The Bioinformatics Research Scientist is responsible for designing, developing, improving, modifying, and operating data analysis pipelines. Manages projects and coordinates other efforts related to a...
stjude.wd1.myworkdayjobs.com
November 26, 2024 at 7:42 PM
All of this would be in IEDB though already.
November 26, 2024 at 12:23 PM
For human work try Katherine Kedzierska’s work with Flu ? Although I don’t know if she’s published a dataset as large as those that exist for mouse work (for vaccinia there’s about 180 mass spec defined epitopes with known T cell responses ). Obviously still some work to do…
November 26, 2024 at 12:21 PM
For mouse virus epitopes datasets for vaccinia and flu see work by @dctscharke.bsky.social and @niclag.bsky.social over the last few years - with special kudos to Nathan Croft and Tony Purcell for defining these epitopes by mass spec (Monash Uni).
November 26, 2024 at 12:15 PM
Where is volume 1? Although granted from memory the Poxviridae chapter (ie the most important) was in Volume 2
November 26, 2024 at 4:55 AM
Many thanks in particular to David Tscharke (not yet on here), Tony Purcell and Nathan Croft
November 19, 2024 at 2:59 AM