VIAMD
@viamd.bsky.social
VIAMD is an interactive analysis tool for MD. https://github.com/scanberg/viamd. Article: https://pubs.acs.org/doi/10.1021/acs.jcim.3c01033. Wiki: https://github.com/scanberg/viamd/wiki Tutorial playlist: https://bit.ly/4aRsPrh #compchem
Very nice work! I saw that you are sharing gro file from your simulation in zenodo. Thank you for that. Would you be willing to also share trajectories. We are always trying to find cool and large trajectory to test our software.
July 2, 2025 at 12:02 PM
Very nice work! I saw that you are sharing gro file from your simulation in zenodo. Thank you for that. Would you be willing to also share trajectories. We are always trying to find cool and large trajectory to test our software.
Reposted by VIAMD
See you there. I'll be at the @veloxchem.bsky.social booth. Presenting our QM software as well as @viamd.bsky.social. #WATOC #compchem
June 18, 2025 at 10:12 AM
See you there. I'll be at the @veloxchem.bsky.social booth. Presenting our QM software as well as @viamd.bsky.social. #WATOC #compchem
Learn how to create a dynamic selection and count its component in function of time: youtu.be/VhJyMkgYIkE?.... #compchem
VIAMD - Dynamic Selection and Counting
YouTube video by mathieu linares
youtu.be
April 7, 2025 at 8:36 AM
Learn how to create a dynamic selection and count its component in function of time: youtu.be/VhJyMkgYIkE?.... #compchem
Learn how to remap element and recenter a trajectory youtu.be/o7KxGW19Qjk?... #compchem
VIAMD - Remapping Element and Recentering Trajectory
YouTube video by mathieu linares
youtu.be
April 7, 2025 at 8:36 AM
Learn how to remap element and recenter a trajectory youtu.be/o7KxGW19Qjk?... #compchem
Learn how to calculate, plot and export spatial distribution function: youtu.be/BDYQEnrhlBQ?... #compchem
VIAMD - Spatial Distribution Function
YouTube video by mathieu linares
youtu.be
April 7, 2025 at 8:36 AM
Learn how to calculate, plot and export spatial distribution function: youtu.be/BDYQEnrhlBQ?... #compchem
Learn about Properties, Selection, Import/Export and Workspace: youtu.be/0w8iPYEVeY8?... #compchem
VIAMD - Properties, Selection, Import/Export and Workspace
YouTube video by mathieu linares
youtu.be
April 7, 2025 at 8:36 AM
Learn about Properties, Selection, Import/Export and Workspace: youtu.be/0w8iPYEVeY8?... #compchem
Learn how to calculate properties and visualize them in the timeline and distribution window. youtu.be/7bqsg3GFly8?... #compchem
VIAMD - Timeline, Distribution, Visual Feedback and Filtering
YouTube video by mathieu linares
youtu.be
April 7, 2025 at 8:36 AM
Learn how to calculate properties and visualize them in the timeline and distribution window. youtu.be/7bqsg3GFly8?... #compchem
Learn how to load a trajectory and change representations: youtu.be/HlIss8Nhtoc?... #compchem
VIAMD - Loading Trajectory and Representations
YouTube video by mathieu linares
youtu.be
April 7, 2025 at 8:36 AM
Learn how to load a trajectory and change representations: youtu.be/HlIss8Nhtoc?... #compchem