Tobias Rausch
@trausch.bsky.social
Genomics, Bioinformatics.
github.com/tobiasrausch
github.com/tobiasrausch
Maybe gffread github.com/gpertea/gffr... or the good old kentUtils ?
GitHub - gpertea/gffread: GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more - gpertea/gffread
github.com
July 4, 2025 at 6:12 PM
Maybe gffread github.com/gpertea/gffr... or the good old kentUtils ?
Reposted by Tobias Rausch
Around genomics, I am looking forward to large scale long read datasets - both Oxford Nanopore and PacBio (COI: I am long established consultant to Oxford Nanopore) where we can get "full" genome representation both for germline and somatic cases. This will transform repeat+structural variant calls
January 3, 2025 at 6:46 PM
Around genomics, I am looking forward to large scale long read datasets - both Oxford Nanopore and PacBio (COI: I am long established consultant to Oxford Nanopore) where we can get "full" genome representation both for germline and somatic cases. This will transform repeat+structural variant calls