Spatial Technology Platform - Broad Institute of MIT & Harvard
@stp-broad.bsky.social
The Spatial Technology Platform (STP) works to lower the barrier to spatial technologies by providing staff run and self-serve spatial omics capabilities. We also collaborate with the community to develop the next generation of expe
Reposted by Spatial Technology Platform - Broad Institute of MIT & Harvard
I'm very excited to be presenting at #ESHG2025 in Milan about our work with Illumina Spatial Technology - Interactive Exploration of Single-Cell Transcriptome-Wide 3D Reconstruction using Celldega
www.linkedin.com/posts/ismahe...
@stp-broad.bsky.social
@broadinstitute.org
bit.ly/celldega
www.linkedin.com/posts/ismahe...
@stp-broad.bsky.social
@broadinstitute.org
bit.ly/celldega
Celldega Documentation
bit.ly
May 23, 2025 at 5:13 PM
I'm very excited to be presenting at #ESHG2025 in Milan about our work with Illumina Spatial Technology - Interactive Exploration of Single-Cell Transcriptome-Wide 3D Reconstruction using Celldega
www.linkedin.com/posts/ismahe...
@stp-broad.bsky.social
@broadinstitute.org
bit.ly/celldega
www.linkedin.com/posts/ismahe...
@stp-broad.bsky.social
@broadinstitute.org
bit.ly/celldega
Congratulations to our graduate student, Brian Kang, on his recent preprint showing a method for finding risk pathways in Huntington’s disease using computational nomination and highly multiplexed immunofluorescence in collaboration with Dr. Ernest Fraenkel at MIT!
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
CellFIE: Integrating Pathway Discovery With Pooled Profiling of Perturbations Uncovers Pathways of Huntington’s Disease, Including Genetic Modifiers of Neuronal Development and Morphology
Genomic screens and GWAS are powerful tools for identifying disease-modifying genes, but it is often challenging to understand the pathways by which these genes function. Here, we take an integrated a...
www.biorxiv.org
March 5, 2025 at 4:08 PM
Congratulations to our graduate student, Brian Kang, on his recent preprint showing a method for finding risk pathways in Huntington’s disease using computational nomination and highly multiplexed immunofluorescence in collaboration with Dr. Ernest Fraenkel at MIT!
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
We are very excited to share our collaboration on 3D reconstruction developing mouse cranium using Illumina spatial technology featuring bit.ly/celldega at #AGBT. View the Workshop on demand here:
www.illumina.com/events/webin...
@mich-lipi.bsky.social
@cornhundred.bsky.social
www.illumina.com/events/webin...
@mich-lipi.bsky.social
@cornhundred.bsky.social
Driving the multiomics revolution: The latest innovations from Illumina
Watch the Illumina Gold Sponsor Workshop from AGBT 2025, as we unveil the next breakthrough in next-generation sequencing and multiomics.
www.illumina.com
February 28, 2025 at 5:12 PM
We are very excited to share our collaboration on 3D reconstruction developing mouse cranium using Illumina spatial technology featuring bit.ly/celldega at #AGBT. View the Workshop on demand here:
www.illumina.com/events/webin...
@mich-lipi.bsky.social
@cornhundred.bsky.social
www.illumina.com/events/webin...
@mich-lipi.bsky.social
@cornhundred.bsky.social
Reposted by Spatial Technology Platform - Broad Institute of MIT & Harvard
Thanks @martinalexsmith.bsky.social and we’re glad you liked the 3D visual of #illumina data from bit.ly/celldega. Amazing work @mich-lipi.bsky.social and @stp-broad.bsky.social team!!
Celldega Documentation
bit.ly
February 26, 2025 at 11:12 AM
Thanks @martinalexsmith.bsky.social and we’re glad you liked the 3D visual of #illumina data from bit.ly/celldega. Amazing work @mich-lipi.bsky.social and @stp-broad.bsky.social team!!
Reposted by Spatial Technology Platform - Broad Institute of MIT & Harvard
My favourite talk so far, @mich-lipi.bsky.social from @broadinstitute.org presented stacked #Illumina spatial slides of the mouse brain transcriptome with subcellular resolution #AGBTGM
I'm sold on spatial now...
I'm sold on spatial now...
February 26, 2025 at 5:27 AM
My favourite talk so far, @mich-lipi.bsky.social from @broadinstitute.org presented stacked #Illumina spatial slides of the mouse brain transcriptome with subcellular resolution #AGBTGM
I'm sold on spatial now...
I'm sold on spatial now...
Reposted by Spatial Technology Platform - Broad Institute of MIT & Harvard
It’s so nice to see our technology in the hands of amazing scientists! Michal Lipinski you rocked the talk at AGBT!!
February 26, 2025 at 12:49 AM
It’s so nice to see our technology in the hands of amazing scientists! Michal Lipinski you rocked the talk at AGBT!!
STP collaborating with Illumina, Inc. soon offering unbiased whole-transcriptome, high resolution, high sensitivity 50mm x 15mm capture areas!
www.illumina.com/company/news...
www.illumina.com/company/news...
Illumina unveils first-of-its-kind spatial transcriptomics technology
www.illumina.com
February 19, 2025 at 5:38 PM
STP collaborating with Illumina, Inc. soon offering unbiased whole-transcriptome, high resolution, high sensitivity 50mm x 15mm capture areas!
www.illumina.com/company/news...
www.illumina.com/company/news...
Reposted by Spatial Technology Platform - Broad Institute of MIT & Harvard
What a cell does depends on its location. Experiments like single cell sequencing strip away signs of where a cell was in its original organ or tissue. New spatial -omics techniques collect in-depth molecular data from cells while retaining that spatial information. Learn more: youtu.be/izhZ9VB1jRM
Spatial -omics: "Location, location, location" applies to biology, too
YouTube video by Broad Institute
youtu.be
December 10, 2024 at 5:05 PM
What a cell does depends on its location. Experiments like single cell sequencing strip away signs of where a cell was in its original organ or tissue. New spatial -omics techniques collect in-depth molecular data from cells while retaining that spatial information. Learn more: youtu.be/izhZ9VB1jRM
Reposted by Spatial Technology Platform - Broad Institute of MIT & Harvard
The Broad’s Spatial Technology Platform supports scientists who want to study cells and tissues with spatial context. In a Q&A, STP director Sami Farhi explains how the team makes spatial tools more accessible and employs them for scientific discovery.
Q&A: How a Broad team uses cutting-edge spatial technologies to enable new science
Sami Farhi, director of Broad’s Spatial Technology Platform, describes how the group, launched in late 2022, supports scientists who want to study cells and tissues with spatial context.
www.broadinstitute.org
December 9, 2024 at 4:31 PM
The Broad’s Spatial Technology Platform supports scientists who want to study cells and tissues with spatial context. In a Q&A, STP director Sami Farhi explains how the team makes spatial tools more accessible and employs them for scientific discovery.