Sepideh Zarandooz
sepidehzarandooz.bsky.social
Sepideh Zarandooz
@sepidehzarandooz.bsky.social
PhD Candidate at MPRG Biosocial group | Max Planck Institute for Human Development
Because saliva 🧪 is more common than blood 🩸 in large pediatric 👶👧 cohorts, we advocate for more saliva-customized algorithms!
April 29, 2025 at 8:37 AM
So, we are losing some between-person 👥signal when applying blood algorithms to saliva. How much depends on the algorithm. While this moderate level of similarity may be useful for some research applications, it probably lacks the accuracy needed for clinical or commercial use💡
April 29, 2025 at 8:37 AM
We found saliva-blood cross-tissue ICCs were mostly moderate for 2nd/3rd gen clocks and DNAm of physiology and Epigenetic-g. PCGrimAge (r=0.76) was highest, then PCPhenoAge (r=0.72) and Epigenetic-g (r=0.69). 1st gen clock acceleration showed poor similarity.
April 29, 2025 at 8:37 AM
To see if we get a similar ranking of people across these tissues, we calculated the cross-tissue ICCs and compared them with the within-tissue ICCs from technical replicates in other studies ⬇️
April 29, 2025 at 8:37 AM
We pooled data from 3 studies with saliva 🧪 and blood 🩸 DNAm (n=107). In each tissue, we computed 3 generations of epigenetic clocks and DNAm measures of CRP, BMI, and cognition (epigenetic-g), adjusting for cell count variation, as we do in our saliva studies
April 29, 2025 at 8:37 AM
Most kids prefer to spit in a tube over a needle! But these algorithms were made in blood🩸so are we measuring something similar in saliva? Our twin👯and longitudinal work is promising, but we’re unsure how much signal we’re losing ➡️ jamanetwork.com/journals/jam...
April 29, 2025 at 8:37 AM
In adults, epigenetic clocks become key biomarkers of age-related health. Second- and third-generation clocks, plus DNAm measures of CRP, BMI, and cognition, are sensitive to social determinants of health in children ➡️ journals.sagepub.com/doi/full/10.... www.nature.com/articles/s41...
Linked emergence of racial disparities in mental health and epigenetic biological aging across childhood and adolescence - Molecular Psychiatry
Molecular Psychiatry - Linked emergence of racial disparities in mental health and epigenetic biological aging across childhood and adolescence
www.nature.com
April 29, 2025 at 8:37 AM