Sam Abbott
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seabbs.bsky.social
Sam Abbott
@seabbs.bsky.social
Real-time infectious disease modelling. Developing methods for outbreak response, surveillance, and pandemic preparedness. samabbott.co.uk
Come join me on the epinowcast forum: https://community.epinowcast.org/latest
For some reason it is much more of a pleasure when it is some software or small idea than a whole paper. Maybe because we have less formal ways to refer to those?
November 12, 2025 at 2:07 PM
which evaluates and builds on some of the work in hashpring
(which really was totally down to Carl than me).

github.com/epinowcast/h...
GitHub - epinowcast/hashprng: Hash-based Matching Pseudo-Random Number Generation
Hash-based Matching Pseudo-Random Number Generation - epinowcast/hashprng
github.com
November 12, 2025 at 2:07 PM
Liked this: "In conclusion, thinking about modelling as experimentation does not cage creativity; it structures it, giving us better tools to ask sharper questions, present clearer answers and build cumulative science."
November 10, 2025 at 4:23 PM
I really enjoyed this - luckily found it just before having a call with John about workflows for IDM vs just after.
November 10, 2025 at 4:22 PM
You're absolutely right! 😜
November 6, 2025 at 4:17 PM
(I mean this all in a context of talking about code not day to day!)
November 6, 2025 at 2:20 PM
For example, I really like communicating briefly and do so with LLMs as it works for them. However, with people its important to add qualifies etc.

Similarly, in a review the LLM can be told to change something small on bulk without a worry but for a person this might take a really long time.
November 6, 2025 at 2:11 PM
5 minutes!
November 5, 2025 at 2:55 PM
I just had a look for tools etc to do some data analysis on this for an individual or research more generally but in the quick skim I had time for didn't find anything.

Does anyone know of good resources?
October 31, 2025 at 10:19 AM
Had another similar conversation about software papers being a bit pointless and just let people cite the software.
October 31, 2025 at 10:19 AM
Had a similar conversation about supervisors not supporting legacy for profit journals like epidemics but feeling they need to support their staff/students submitting to them. The counter point I guess is tracking paper trajectory to see if that actually matters in the stats.
October 31, 2025 at 10:19 AM