Rong Fan
@rongfan8.bsky.social
Reposted by Rong Fan
here Leslie and I celebrating first via Zoom with @rongfan8.bsky.social and Di, together with our Molneuro Unit and coauthors as @peruhlen.bsky.social , and then at dinner with the lab
November 5, 2025 at 4:03 PM
here Leslie and I celebrating first via Zoom with @rongfan8.bsky.social and Di, together with our Molneuro Unit and coauthors as @peruhlen.bsky.social , and then at dinner with the lab
Reposted by Rong Fan
Our latest collaboration with @rongfan8.bsky.social, spatial triomics to investigate myelin and cortical brain development, and demyelination, spearheaded by Leslie Kirby in our lab @ki.se and Di Zhang in Rong's lab! Check it out @nature.com
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Spatial dynamics of brain development and neuroinflammation - Nature
A tri-omic atlas of the mouse brain from postnatal day 0 to P21 reveals that layer-specific projection neurons have a role in coordinating axonogenesis and myelination.
www.nature.com
November 5, 2025 at 4:03 PM
Our latest collaboration with @rongfan8.bsky.social, spatial triomics to investigate myelin and cortical brain development, and demyelination, spearheaded by Leslie Kirby in our lab @ki.se and Di Zhang in Rong's lab! Check it out @nature.com
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Reposted by Rong Fan
And now for our final speaker of #BICC2025: Rong Fan (@rongfan8.bsky.social) from @yale.edu who will be telling us about his spatial multi-omics work in lymphoma
May 29, 2025 at 2:51 PM
And now for our final speaker of #BICC2025: Rong Fan (@rongfan8.bsky.social) from @yale.edu who will be telling us about his spatial multi-omics work in lymphoma
Reposted by Rong Fan
Great to catch up with @rongfan8.bsky.social in Marseille, where we both end up for two completely unrelated conferences!
July 10, 2025 at 3:54 PM
Great to catch up with @rongfan8.bsky.social in Marseille, where we both end up for two completely unrelated conferences!
Reposted by Rong Fan
Join us at the FENS Single-Cell & Spatial Omics Winter School with:
@sarabiz86.bsky.social
@rongfan8.bsky.social
@gokcegroup.bsky.social
@gioelelamanno.bsky.social
@sj-marzi.bsky.social
@jplopez-atalaya.bsky.social
Ana Falcão
Florian Rosenberger
Gabriel Baró
Bosiljka Tasic
Barbara Treutlein
@sarabiz86.bsky.social
@rongfan8.bsky.social
@gokcegroup.bsky.social
@gioelelamanno.bsky.social
@sj-marzi.bsky.social
@jplopez-atalaya.bsky.social
Ana Falcão
Florian Rosenberger
Gabriel Baró
Bosiljka Tasic
Barbara Treutlein
🌟 Registration is now OPEN! 🌟
Join the 2025-2026 #FENS-Hertie #WinterSchool and explore this year's topic – Single-cell and Spatial Omics to Understand Brain Heterogeneity! 🔬
📍 Alicante, Spain
🗓️ 11-17 Jan 2026
🔗 https://loom.ly/RM55lFQ
Join the 2025-2026 #FENS-Hertie #WinterSchool and explore this year's topic – Single-cell and Spatial Omics to Understand Brain Heterogeneity! 🔬
📍 Alicante, Spain
🗓️ 11-17 Jan 2026
🔗 https://loom.ly/RM55lFQ
August 12, 2025 at 11:24 AM
Join us at the FENS Single-Cell & Spatial Omics Winter School with:
@sarabiz86.bsky.social
@rongfan8.bsky.social
@gokcegroup.bsky.social
@gioelelamanno.bsky.social
@sj-marzi.bsky.social
@jplopez-atalaya.bsky.social
Ana Falcão
Florian Rosenberger
Gabriel Baró
Bosiljka Tasic
Barbara Treutlein
@sarabiz86.bsky.social
@rongfan8.bsky.social
@gokcegroup.bsky.social
@gioelelamanno.bsky.social
@sj-marzi.bsky.social
@jplopez-atalaya.bsky.social
Ana Falcão
Florian Rosenberger
Gabriel Baró
Bosiljka Tasic
Barbara Treutlein
Looking forward to the FENS neuroscience winter school in Jan 2026! 🤩🥳🤩
🌟 Registration is now OPEN! 🌟
Join the 2025-2026 #FENS-Hertie #WinterSchool and explore this year's topic – Single-cell and Spatial Omics to Understand Brain Heterogeneity! 🔬
📍 Alicante, Spain
🗓️ 11-17 Jan 2026
🔗 https://loom.ly/RM55lFQ
Join the 2025-2026 #FENS-Hertie #WinterSchool and explore this year's topic – Single-cell and Spatial Omics to Understand Brain Heterogeneity! 🔬
📍 Alicante, Spain
🗓️ 11-17 Jan 2026
🔗 https://loom.ly/RM55lFQ
August 16, 2025 at 7:54 PM
Looking forward to the FENS neuroscience winter school in Jan 2026! 🤩🥳🤩
This stunning science art comes from a lymphoma case diagnosed by my incredible friend, hematopathology director Mina Xu. Art inspired by science brings awareness and hope, and helps patients.
Congratulations to Zhiliang Bai, PhD, a Postdoctoral Associate in the Lab of @rongfan8.bsky.social at @yaleschoolofmed.bsky.social, for having an image he created chosen for the “The Beauty of Science,” art display outside the Cushing/Whitney Medical Library at YSM.
April 23, 2025 at 1:47 PM
This stunning science art comes from a lymphoma case diagnosed by my incredible friend, hematopathology director Mina Xu. Art inspired by science brings awareness and hope, and helps patients.
We are incredibly grateful to Mark Foundation and Follicular Lymphoma Foundation for the ASPIRE award, supporting our research on decoding human follicular lymphoma progression and transformation.
Another ASPIRE Award supports Rong Fan, Mina Xu, & Coraline Mlynarczyk at @yaleschoolofmed.bsky.social. Their research will use advanced spatial omics to map genetic changes & the microenvironment of FL tumors, predicting progression & treatment responses.
themarkfoundation.org/portfolio/en...
themarkfoundation.org/portfolio/en...
April 13, 2025 at 1:53 AM
We are incredibly grateful to Mark Foundation and Follicular Lymphoma Foundation for the ASPIRE award, supporting our research on decoding human follicular lymphoma progression and transformation.
I am incredibly honored and deeply grateful for receiving the 2024 YCC Translational Cancer Research Award! Thank you Yale Cancer Center from the bottom of my heart for this recognition and for your continued support! 💕
medicine.yale.edu/news-article...
medicine.yale.edu/news-article...
Yale Cancer Center Annual Awards
Formerly called the Conclave Awards, the 2025 Spring Yale Cancer Center awards honored research, clinical expertise, and support staff at the Hotel Marcel, New
medicine.yale.edu
April 13, 2025 at 1:43 AM
I am incredibly honored and deeply grateful for receiving the 2024 YCC Translational Cancer Research Award! Thank you Yale Cancer Center from the bottom of my heart for this recognition and for your continued support! 💕
medicine.yale.edu/news-article...
medicine.yale.edu/news-article...
Reposted by Rong Fan
Reposted by Rong Fan
Fabulous group photos from our recent conference in Athens !🎉 #MICC2025 Please feel free to share and tag :)
@peeperlab.bsky.social @yardenasamuels.bsky.social @leeat-keren.bsky.social @rongfan8.bsky.social @shouval.bsky.social @yogogurt.bsky.social @eriksahailab.bsky.social
@peeperlab.bsky.social @yardenasamuels.bsky.social @leeat-keren.bsky.social @rongfan8.bsky.social @shouval.bsky.social @yogogurt.bsky.social @eriksahailab.bsky.social
March 23, 2025 at 7:38 AM
Fabulous group photos from our recent conference in Athens !🎉 #MICC2025 Please feel free to share and tag :)
@peeperlab.bsky.social @yardenasamuels.bsky.social @leeat-keren.bsky.social @rongfan8.bsky.social @shouval.bsky.social @yogogurt.bsky.social @eriksahailab.bsky.social
@peeperlab.bsky.social @yardenasamuels.bsky.social @leeat-keren.bsky.social @rongfan8.bsky.social @shouval.bsky.social @yogogurt.bsky.social @eriksahailab.bsky.social
Reposted by Rong Fan
ASTRO
Automated Spatial Whole-Transcriptome RNA-Expression wOrkflow
for Patho-DBiT
#SpatialRNAEncyclopedia
coding + noncoding RNAs
github.com/gersteinlab/...
vs ST-pipeline
Establishment of a non-coding RNA reference😎
@rongfan8.bsky.social bioRxiv 2025
www.biorxiv.org/content/10.1...
Automated Spatial Whole-Transcriptome RNA-Expression wOrkflow
for Patho-DBiT
#SpatialRNAEncyclopedia
coding + noncoding RNAs
github.com/gersteinlab/...
vs ST-pipeline
Establishment of a non-coding RNA reference😎
@rongfan8.bsky.social bioRxiv 2025
www.biorxiv.org/content/10.1...
February 24, 2025 at 7:52 PM
ASTRO
Automated Spatial Whole-Transcriptome RNA-Expression wOrkflow
for Patho-DBiT
#SpatialRNAEncyclopedia
coding + noncoding RNAs
github.com/gersteinlab/...
vs ST-pipeline
Establishment of a non-coding RNA reference😎
@rongfan8.bsky.social bioRxiv 2025
www.biorxiv.org/content/10.1...
Automated Spatial Whole-Transcriptome RNA-Expression wOrkflow
for Patho-DBiT
#SpatialRNAEncyclopedia
coding + noncoding RNAs
github.com/gersteinlab/...
vs ST-pipeline
Establishment of a non-coding RNA reference😎
@rongfan8.bsky.social bioRxiv 2025
www.biorxiv.org/content/10.1...
Reposted by Rong Fan
#SpatialRNAEncyclopedia
Patho-DBiT
#SpatialTranscriptomics FFPE
Spatial Co-mapping of RNA Expression Splicing Editing SNV AND ncRNAs (miRNA lncRNA rRNA snRNA)👹
in situ polyA tailing
10 μm/px➡️ >2000 genes Lymphoma
@rongfan8.bsky.social @cellcellpress.bsky.social 2025
www.cell.com/cell/fulltex...
Patho-DBiT
#SpatialTranscriptomics FFPE
Spatial Co-mapping of RNA Expression Splicing Editing SNV AND ncRNAs (miRNA lncRNA rRNA snRNA)👹
in situ polyA tailing
10 μm/px➡️ >2000 genes Lymphoma
@rongfan8.bsky.social @cellcellpress.bsky.social 2025
www.cell.com/cell/fulltex...
February 24, 2025 at 12:49 PM
#SpatialRNAEncyclopedia
Patho-DBiT
#SpatialTranscriptomics FFPE
Spatial Co-mapping of RNA Expression Splicing Editing SNV AND ncRNAs (miRNA lncRNA rRNA snRNA)👹
in situ polyA tailing
10 μm/px➡️ >2000 genes Lymphoma
@rongfan8.bsky.social @cellcellpress.bsky.social 2025
www.cell.com/cell/fulltex...
Patho-DBiT
#SpatialTranscriptomics FFPE
Spatial Co-mapping of RNA Expression Splicing Editing SNV AND ncRNAs (miRNA lncRNA rRNA snRNA)👹
in situ polyA tailing
10 μm/px➡️ >2000 genes Lymphoma
@rongfan8.bsky.social @cellcellpress.bsky.social 2025
www.cell.com/cell/fulltex...
Reposted by Rong Fan
Connecting gene activity & precise location of protein function by Deterministic Barcoding in Tissue sequencing (DBiTplus)
📷: Archibald Enninful, Zhaojun Zhang et al
Mina Xu, Zongming Ma @rongfan8.bsky.social
@yale.edu in @biorxivpreprint.bsky.social
➡️: bpod.org.uk/archive/2025... &
AntDLewis
📷: Archibald Enninful, Zhaojun Zhang et al
Mina Xu, Zongming Ma @rongfan8.bsky.social
@yale.edu in @biorxivpreprint.bsky.social
➡️: bpod.org.uk/archive/2025... &
AntDLewis
February 3, 2025 at 12:21 PM
Connecting gene activity & precise location of protein function by Deterministic Barcoding in Tissue sequencing (DBiTplus)
📷: Archibald Enninful, Zhaojun Zhang et al
Mina Xu, Zongming Ma @rongfan8.bsky.social
@yale.edu in @biorxivpreprint.bsky.social
➡️: bpod.org.uk/archive/2025... &
AntDLewis
📷: Archibald Enninful, Zhaojun Zhang et al
Mina Xu, Zongming Ma @rongfan8.bsky.social
@yale.edu in @biorxivpreprint.bsky.social
➡️: bpod.org.uk/archive/2025... &
AntDLewis
Just picked up the beautiful offprint of our Patho-DBiT paper that was on the cover of Cell, highlighting its power to spatially explore molecular biology in human FFPE tissues 🤩🤩 . Congratulations to my phenomenal postdoc Zhiliang Bai and all amazing collaborators!!
January 28, 2025 at 9:26 PM
Just picked up the beautiful offprint of our Patho-DBiT paper that was on the cover of Cell, highlighting its power to spatially explore molecular biology in human FFPE tissues 🤩🤩 . Congratulations to my phenomenal postdoc Zhiliang Bai and all amazing collaborators!!
Reposted by Rong Fan
Congrats Dr.Zhang for your postdoctoral travel award! Way to go with spatial transcriptomics! #cmbe2025 @rongfan8.bsky.social @yalebooks.bsky.social @yaleengineering.bsky.social
January 4, 2025 at 6:05 PM
Congrats Dr.Zhang for your postdoctoral travel award! Way to go with spatial transcriptomics! #cmbe2025 @rongfan8.bsky.social @yalebooks.bsky.social @yaleengineering.bsky.social
Incredible #epigenetics conference organized by @mpi-ie.bsky.social and a wonderful community!!!
We ended day one on a high note with fantastic talks from @rongfan8.bsky.social and @mariekeoudelaar.bsky.social covering topics ranging from 3D genome folding to spatial multi-omics. It has been fantastic first day. 🤗
December 7, 2024 at 12:15 AM
Incredible #epigenetics conference organized by @mpi-ie.bsky.social and a wonderful community!!!
My first post here on our research 🥳. Two preprints from my lab at Yale and Dr. Lingyan Shi’s lab at UCSD report same tissue section multi-modal spatial omics mapping! Please check them out. 🤩
November 12, 2024 at 5:26 PM
My first post here on our research 🥳. Two preprints from my lab at Yale and Dr. Lingyan Shi’s lab at UCSD report same tissue section multi-modal spatial omics mapping! Please check them out. 🤩
Spatial Multi-Omics for Cancer Systems Biology Workshop! It is organized by our NCI-funded cancer systems biology center. We will highlight talks by the leaders in the field as well as some hands-on experiences in computational analysis of spatial multi omics data!
isbscience.org/spatial-mult...
isbscience.org/spatial-mult...
isbscience.org
January 11, 2024 at 1:12 PM
Spatial Multi-Omics for Cancer Systems Biology Workshop! It is organized by our NCI-funded cancer systems biology center. We will highlight talks by the leaders in the field as well as some hands-on experiences in computational analysis of spatial multi omics data!
isbscience.org/spatial-mult...
isbscience.org/spatial-mult...