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ravindra-raut.bsky.social
ravindra-raut.bsky.social
@ravindra-raut.bsky.social
TransposonExplorer
Reposted by ravindra-raut.bsky.social
We dive into the dynamics of #starships 🚀 in a fungal pathogen to ask: how might these giant #transposons impact human health? We find they drive genome-wide variation, encode clinically-relevant traits and even transpose within the same strain! 🍄🧪 out today in mBio #goteam doi.org/10.1128/mbio...
Giant transposons promote strain heterogeneity in a major fungal pathogen | mBio
No “one size fits all” option exists for treating fungal infections in large part due to genetic and phenotypic variability among strains. Accounting for strain heterogeneity is thus fundamental for d...
doi.org
May 13, 2025 at 8:11 AM
Reposted by ravindra-raut.bsky.social
The virulence gene ToxB is both amplified and disrupted by transposons in the wheat pathogen Pyrenophora tritici-repentis https://www.biorxiv.org/content/10.1101/2025.11.13.688278v1
November 14, 2025 at 2:31 AM
Reposted by ravindra-raut.bsky.social
Save the date: 20 Nov 2025 at 17h. Megan McDonald will present: Jumping Genes and Pathogenic Schemes: the diverse roles that transposons play in pathogen evolution.
A must for the pathology community!
Info here: www.wheatinitiative.org/new-events/m...
@karchuntan.bsky.social
@ReemWheat.bsky.social
November 13, 2025 at 8:00 AM
Reposted by ravindra-raut.bsky.social
The first paper of my PhD is now available as a preprint! 🎉

Transposable elements (TEs) don't just jump within fungal genomes, they also move extensively between species. In this study, we screened over 1,300 fungal genomes and found a conservative estimate of 5,500+ horizontal transfer events.
www.biorxiv.org
June 20, 2025 at 7:39 PM
Reposted by ravindra-raut.bsky.social
TEs aren’t just genomic parasites, they’re also engines of genomic novelty.

Our new study with ~2,000 Z. tritici genomes shows repeated TE mobilization waves during global expansion.

With @danielcroll.bsky.social & @guidopuccetti.bsky.social

🧬 www.nature.com/articles/s41...

#TEworldwide
Historic transposon mobilisation waves create distinct pools of adaptive variants in a major crop pathogen - Nature Communications
In this study, the authors analysed a large genomic dataset to trace how jumping genes shaped the global spread of a major wheat pathogen and reveal bursts of activity over decades that drove adaptati...
www.nature.com
November 12, 2025 at 1:17 PM
Reposted by ravindra-raut.bsky.social
James D. Watson, whose co-discovery of the twisted-ladder structure of DNA in 1953 helped light the long fuse on a revolution in medicine, crimefighting, genealogy and ethics, has died, according to his former research lab. He was 97.
https://to.pbs.org/4qPbNSp
James D. Watson, scientist who co-discovered DNA's double-helix shape, dies at 97
The breakthrough -- made when the brash, Chicago-born Watson was just 24 -- turned him into a hallowed figure in the world of science for decades. But near the end of his life, he faced condemnation and professional censure for offensive remarks, includ...
www.pbs.org
November 7, 2025 at 8:33 PM
Reposted by ravindra-raut.bsky.social
🪰 🧬16th #DrosEU2026 Workshop & Satellite #DrosophilaSuzukii Meeting Conference will take place 13–17 April 2026 in #Montpellier, France 🇫🇷.

We look forward to connecting with colleagues across Europe to discuss new research in #Drosophila #genomics #evolution & #CitizenScience +info 👉 droseu.net
October 31, 2025 at 1:20 PM
Reposted by ravindra-raut.bsky.social
Excited to share my talk at the EMBL John Kendrew Award ceremony about what transposons taught me about science, life, and change along the way.

Big thanks to my mentors, the @embl.org Alumni community, and my current scientific home @maxperutzlabs.bsky.social 💛

youtu.be/NwIikKS7EWE?...
Irma Querques - 2025 John Kendrew Award Recipient
YouTube video by EMBL Alumni
youtu.be
August 26, 2025 at 6:03 AM
Reposted by ravindra-raut.bsky.social
EMBL’s 2025 Kendrew alumni award recipient may know how to make fairy tales come true.

Irma Querques (@irmaquerques.bsky.social) repurposed the ‘Sleeping Beauty’ transposon as a genetic tool for new therapeutics, particularly against cancer.

www.embl.org/news/people-...
October 14, 2025 at 11:46 AM
Reposted by ravindra-raut.bsky.social
A new subgroup of #CRISPR-associated transposons, V-K_V2, has been discovered in Nostocales #cyanobacteria by @cyanolab.bsky.social & colleagues 🧬. Its unique features suggest genetic mobility and V2 tracrRNAs are now included in the updated CRISPRtracrRNA tool.
buff.ly/gioIfEB
October 8, 2025 at 11:03 AM
Reposted by ravindra-raut.bsky.social
Kicked off a series on #Drosophila TE discovery and naming. The first post covers elements that predate the term "mobile element", and more. artemilin.dev/posts/te_nam...
Drosophila TE name origins, Part 1 – Postdoc Postpunk
artemilin.dev
September 21, 2025 at 7:49 PM
Reposted by ravindra-raut.bsky.social
🎓 Sharpen your RNA-seq skills at EuroBioC2025 Workshops!

📍 Barcelona | Bulk & Single-cell RNA-seq
📅 Sept 15–16 | Hands-on training
🎟️ Limited spots. Register now: eurobioc2025.bioconductor.org

#Bioinformatics #EuroBioC2025
June 12, 2025 at 8:58 AM
🧬Happy Transposon Day!

🎉Each year on the 16th of June we commemorate the birthdate of the founder of transposable element research, Barbara McClintock (1902-1992).

#TransposonDay2025 #MobileDNAjournal
June 16, 2025 at 12:05 PM
Reposted by ravindra-raut.bsky.social
Join our team as a postdoc and explore the exciting world of transposable elements and developmental biology with us! @imbavienna.bsky.social @vbcscitraining.bsky.social
April 6, 2025 at 4:24 PM
Reposted by ravindra-raut.bsky.social
Pre-registration is now open for our second (free) course on phylogenomic data analysis and visualization using ETE, funded by @cziscience.bsky.social

First time to cover new ETE4 features: Interactive viz of huge tree, profiling...

In Madrid, April 21-25. Travel fellowships available!
March 6, 2025 at 3:32 PM
Reposted by ravindra-raut.bsky.social
Please register for the course on Transposable elements in #genomics and #datascience. We will be sharing the magic of #nanopore long reads for #transposon expression #tesky
November 19, 2024 at 8:15 AM