- Founding partner of the wwPDB.
- Manage the community-led PDBe-KB resource and the AlphaFold Protein Structure Database, a collaboration with Google DeepMind.
- Part of EMBL-EBI
🔗 Explore (SARS-CoV-2 spike, PDB 9CXE): ebi.ac.uk/pdbe/pdbe-kb...
📄 Read the preprint: ssrn.com/abstract=568...
#PDBeKB #MacromolecularComplexes #StructuralBiology
🔗 Explore (SARS-CoV-2 spike, PDB 9CXE): ebi.ac.uk/pdbe/pdbe-kb...
📄 Read the preprint: ssrn.com/abstract=568...
#PDBeKB #MacromolecularComplexes #StructuralBiology
To ensure FAIR data practices, wwPDB is remediating existing polyatomic metal-containing entries and CCDs — improving their chemical and coordination descriptions for better findability and reuse.
To ensure FAIR data practices, wwPDB is remediating existing polyatomic metal-containing entries and CCDs — improving their chemical and coordination descriptions for better findability and reuse.
Totals v4 → v6: 241,070,489 entries.
Since v4: +65,711,653 added, 39,324,993 removed, 276,539 changed (in sequence), 175,082,297 unchanged (metadata refresh, relabelled v6). Details 👇
Totals v4 → v6: 241,070,489 entries.
Since v4: +65,711,653 added, 39,324,993 removed, 276,539 changed (in sequence), 175,082,297 unchanged (metadata refresh, relabelled v6). Details 👇
For more information, read the news item: www.ebi.ac.uk/pdbe/news/br...
For more information, read the news item: www.ebi.ac.uk/pdbe/news/br...
Try the new PDBe-KB Complex pages and let us know:
🔸 What’s working?
🔸 What’s confusing?
🔸 What features are lacking
💬 Feedback form: tinyurl.com/pdbekb-compl...
#PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science
Try the new PDBe-KB Complex pages and let us know:
🔸 What’s working?
🔸 What’s confusing?
🔸 What features are lacking
💬 Feedback form: tinyurl.com/pdbekb-compl...
#PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science
🗂️ Unified view of PDB assemblies
🧬 Standardised annotations
📊 Structural metrics and interactive visualisations
🔗 wwwdev.ebi.ac.uk/pdbe/pdbe-kb...
#PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science
🗂️ Unified view of PDB assemblies
🧬 Standardised annotations
📊 Structural metrics and interactive visualisations
🔗 wwwdev.ebi.ac.uk/pdbe/pdbe-kb...
#PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science
Fill in a 6-minute survey about your experience with PDBePISA
forms.gle/PfoCYHJe1y9L...
Fill in a 6-minute survey about your experience with PDBePISA
forms.gle/PfoCYHJe1y9L...
Same macromolecular complex. Different experimental conditions. All assemblies in one place.
🔍 Try the beta now: wwwdev.ebi.ac.uk/pdbe/pdbe-kb...
#PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science
Same macromolecular complex. Different experimental conditions. All assemblies in one place.
🔍 Try the beta now: wwwdev.ebi.ac.uk/pdbe/pdbe-kb...
#PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science
PDBe brings new updated REST API endpoints that fully replicates the functionality of the old service, while introducing performance enhancements and additional endpoints.
⬇️ Read more⬇️
www.ebi.ac.uk/pdbe/news/un...
PDBe brings new updated REST API endpoints that fully replicates the functionality of the old service, while introducing performance enhancements and additional endpoints.
⬇️ Read more⬇️
www.ebi.ac.uk/pdbe/news/un...
🧪 MS6_P7 - Building a FAIR Repository for Fragment-Based Screening Campaigns - Presented by Genevieve Evans
All ECM poster titles & abstracts available here:
🔗 ecm35.ecanews.org/poster-hiper...
#Biology #Chemistry
🧪 MS6_P7 - Building a FAIR Repository for Fragment-Based Screening Campaigns - Presented by Genevieve Evans
All ECM poster titles & abstracts available here:
🔗 ecm35.ecanews.org/poster-hiper...
#Biology #Chemistry
2026 PDBArt calendars 🎨🗓️ available.
🔗 www.ebi.ac.uk/pdbe/pdb-art
Crystallography continues to unlock the secrets of biomolecular structures!
#Biology # Chemistry
2026 PDBArt calendars 🎨🗓️ available.
🔗 www.ebi.ac.uk/pdbe/pdb-art
Crystallography continues to unlock the secrets of biomolecular structures!
#Biology # Chemistry
Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p...
#PDBeBeta #OpenScience #ProteinData #AnnotationsAPI #ARISE #IUCr
Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p...
#PDBeBeta #OpenScience #ProteinData #AnnotationsAPI #ARISE #IUCr
Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p...
#PDBeBeta #ResidueLevelInsights #PDBeValidation #ARISE #IUCr
Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p...
#PDBeBeta #ResidueLevelInsights #PDBeValidation #ARISE #IUCr
Thanks to your feedback on last week’s AlphaFold DB redesign, we have
✅ Added interactive sequence navigation
✅ Made downloads faster clearer
✅ Listed the PDB coordinate file as its own option
Keep the feedback coming
🔗 alphafold.ebi.ac.uk/entry/P09958
Thanks to your feedback on last week’s AlphaFold DB redesign, we have
✅ Added interactive sequence navigation
✅ Made downloads faster clearer
✅ Listed the PDB coordinate file as its own option
Keep the feedback coming
🔗 alphafold.ebi.ac.uk/entry/P09958
Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p...
#PDBeBeta #Molstar #Bioinformatics #ResidueLevelInsights #ARISE #IUCr
Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p...
#PDBeBeta #Molstar #Bioinformatics #ResidueLevelInsights #ARISE #IUCr
🔍 Check out the ⭐ Text Annotations (AI) ⭐ tab on the new #PDBeBeta pages!
🔗 wwwdev.ebi.ac.uk/pdbe/entry/p...
#AIinBiology #Biology #Science #ARISE #IUCr
🔍 Check out the ⭐ Text Annotations (AI) ⭐ tab on the new #PDBeBeta pages!
🔗 wwwdev.ebi.ac.uk/pdbe/entry/p...
#AIinBiology #Biology #Science #ARISE #IUCr
Cardiotoxins ☠️ in #snake venom target the heart ❤️.
Article on the science-behind-the-art ⬇️
www.ebi.ac.uk/pdbe/article...
#SciArt #PDBart #Poison #NatureArt
Cardiotoxins ☠️ in #snake venom target the heart ❤️.
Article on the science-behind-the-art ⬇️
www.ebi.ac.uk/pdbe/article...
#SciArt #PDBart #Poison #NatureArt
👉 www.ebi.ac.uk/training/onl...
Not all 3D macromolecular models are created equal!
Companion to our #AlphaFold course, this free tutorial upskills for evaluation of BOTH experimental & predicted models!
#Biology #Chemistry #Science
👉 www.ebi.ac.uk/training/onl...
Not all 3D macromolecular models are created equal!
Companion to our #AlphaFold course, this free tutorial upskills for evaluation of BOTH experimental & predicted models!
#Biology #Chemistry #Science
A great opportunity to connect with users, collaborators & fellow data enthusiasts alongside our @ebi.embl.org colleagues!
Thanks to everyone who chatted with us about proteins, RNA, DNA, ligands & more!
#Science #Chemistry #Biology
A great opportunity to connect with users, collaborators & fellow data enthusiasts alongside our @ebi.embl.org colleagues!
Thanks to everyone who chatted with us about proteins, RNA, DNA, ligands & more!
#Science #Chemistry #Biology
🗝️ Keynotes:
www.iscb.org/ismbeccb2025...
🧬More strucurtal bionformatics / computational biology talks, #3DSIG stream:
www.iscb.org/ismbeccb2025...
@3dsig.bsky.social
🗝️ Keynotes:
www.iscb.org/ismbeccb2025...
🧬More strucurtal bionformatics / computational biology talks, #3DSIG stream:
www.iscb.org/ismbeccb2025...
@3dsig.bsky.social
🧪 106 - Shape retrieval methods for the classification of protein surfaces!
Poster abstracts (search by title or name) available here:
www.iscb.org/ismbeccb2025...
🧪 106 - Shape retrieval methods for the classification of protein surfaces!
Poster abstracts (search by title or name) available here:
www.iscb.org/ismbeccb2025...
🧪 027 - Small molecules in the PDB
🧪 045 - AlphaFold Protein Structure Database
🧪 046 - Fragment-based screening data in the PDB
🧪 247 - Improved PDBe & PDBe-KB webpages
Full titles in images.
Abstracts:
🔗 www.iscb.org/ismbeccb2025...
🧪 027 - Small molecules in the PDB
🧪 045 - AlphaFold Protein Structure Database
🧪 046 - Fragment-based screening data in the PDB
🧪 247 - Improved PDBe & PDBe-KB webpages
Full titles in images.
Abstracts:
🔗 www.iscb.org/ismbeccb2025...
📄 Papers and Reviews citing the structure publication
🔎 Papers and Reviews mentioning the PDB ID
🧬 Figures from open access publications
via our integration with @europepmc.org
#PDBeBeta #Bioinformatics #Bioinformatics #Biochemistry
📄 Papers and Reviews citing the structure publication
🔎 Papers and Reviews mentioning the PDB ID
🧬 Figures from open access publications
via our integration with @europepmc.org
#PDBeBeta #Bioinformatics #Bioinformatics #Biochemistry