@pankbase.bsky.social
Last month, members from our PanKbase team in conjunction with @dknet.org gave a bootcamp for the Sugar Science D challenge on how to mine data sets from PanKbase and Panc-DB. If you're interested in how you can mine the data for your own research, watch here: youtu.be/hIDoUfHXeFg?...
D Challenge 2025 Bootcamp: PANC-DB and PanKbase
YouTube video by The Sugar Science
youtu.be
November 11, 2025 at 4:47 PM
Last month, members from our PanKbase team in conjunction with @dknet.org gave a bootcamp for the Sugar Science D challenge on how to mine data sets from PanKbase and Panc-DB. If you're interested in how you can mine the data for your own research, watch here: youtu.be/hIDoUfHXeFg?...
@dknet.org has postdoc positions available! Share with your trainees that might be interested!
dknet.org/about/positi...
dknet.org/about/positi...
dknet.org
October 23, 2025 at 1:21 PM
@dknet.org has postdoc positions available! Share with your trainees that might be interested!
dknet.org/about/positi...
dknet.org/about/positi...
Lead by PanKbase MPI, Jie Liu, the NEW multimodal AI for T1D project aims to use the latest advances in AI and health data to speed discovery of treatments for T1D. Also included in this project are other MPIs Marcela Brissova, Shuibing Chen, and Steve Parker.
diabetes.med.umich.edu/events-news/...
diabetes.med.umich.edu/events-news/...
A New Collaborative to Better Predict, Prevent, and Treat Type 1 Diabetes
diabetes.med.umich.edu
October 16, 2025 at 6:37 PM
Lead by PanKbase MPI, Jie Liu, the NEW multimodal AI for T1D project aims to use the latest advances in AI and health data to speed discovery of treatments for T1D. Also included in this project are other MPIs Marcela Brissova, Shuibing Chen, and Steve Parker.
diabetes.med.umich.edu/events-news/...
diabetes.med.umich.edu/events-news/...
If you missed the Sugar Science T1D Th1nk Tank featuring PanKbase PIs Shuibing Chen (@shuibingchen.bsky.social) and Stephen Parker on integrative single-cell multi-omics profiling of human pancreatic islets, rewatch it here: youtu.be/aQlmpMarm3M?...
T1D Th1nk Tank: Shuibing Chen, PhD, & Stephen Parker, PhD, Weill Cornell and University of Michigan
YouTube video by The Sugar Science
youtu.be
October 3, 2025 at 2:30 PM
If you missed the Sugar Science T1D Th1nk Tank featuring PanKbase PIs Shuibing Chen (@shuibingchen.bsky.social) and Stephen Parker on integrative single-cell multi-omics profiling of human pancreatic islets, rewatch it here: youtu.be/aQlmpMarm3M?...
Interested in data? T1D? Check out Sugar Science's D Challenge: apply your skills and passion, dive into pre-existing data, build new models, and posit new hypotheses. Our PI Marcela Brissova is running a data bootcamp and PI Kyle Gaulton is one of the judges! thesugarscience.org/dchallenge20...
thesugarscience
thesugarscience.org
September 17, 2025 at 9:17 PM
Interested in data? T1D? Check out Sugar Science's D Challenge: apply your skills and passion, dive into pre-existing data, build new models, and posit new hypotheses. Our PI Marcela Brissova is running a data bootcamp and PI Kyle Gaulton is one of the judges! thesugarscience.org/dchallenge20...
PanKbase PIs, Drs. Stephen Parker and Shuibing Chen, are giving a webinar entitled: "Integrative single-cell multi-omics profiling of human pancreatic islets identifies T1D-associated genes and regulatory signals" Sept. 25th, at 12pm EDT. For info and to register: us02web.zoom.us/meeting/regi...
September 10, 2025 at 9:14 PM
PanKbase PIs, Drs. Stephen Parker and Shuibing Chen, are giving a webinar entitled: "Integrative single-cell multi-omics profiling of human pancreatic islets identifies T1D-associated genes and regulatory signals" Sept. 25th, at 12pm EDT. For info and to register: us02web.zoom.us/meeting/regi...
Anna Gloyn (@annagloyn.bsky.social), Jie Liu, Noel Burtt, and Marcela Brissova from the PanKbase team gave a webinar for the HIRN webinar series. If you missed it and want to know how PanKbase might help compliment your type I diabetes research, watch it here: youtu.be/3qLiBdIOJhY?...
HIRN Webinar: PanKbase: A Centralized Knowledge Base of the Human Pancreas for Diabetes Research
YouTube video by Human Islet Research Network
youtu.be
September 5, 2025 at 5:06 PM
Anna Gloyn (@annagloyn.bsky.social), Jie Liu, Noel Burtt, and Marcela Brissova from the PanKbase team gave a webinar for the HIRN webinar series. If you missed it and want to know how PanKbase might help compliment your type I diabetes research, watch it here: youtu.be/3qLiBdIOJhY?...
Great news: DEADLINE EXTENDED. The submission deadline for our new pilot funding opportunity has been extended. This funding aims to advance data-driven pancreas and type 1 diabetes research, focusing on AI, LLMs, and RAG. Check out the details on our funding page: pankbase.org/funding.html
Funding Opportunities | PanKBase
pankbase.org
August 5, 2025 at 3:34 PM
Great news: DEADLINE EXTENDED. The submission deadline for our new pilot funding opportunity has been extended. This funding aims to advance data-driven pancreas and type 1 diabetes research, focusing on AI, LLMs, and RAG. Check out the details on our funding page: pankbase.org/funding.html
BIG NEWS!!!
PanKbase AI funding pilot program is now open. Have a look feel free to share with colleagues.
pankbase.org/funding.html
PanKbase AI funding pilot program is now open. Have a look feel free to share with colleagues.
pankbase.org/funding.html
Funding Opportunities | PanKBase
pankbase.org
July 21, 2025 at 1:57 PM
BIG NEWS!!!
PanKbase AI funding pilot program is now open. Have a look feel free to share with colleagues.
pankbase.org/funding.html
PanKbase AI funding pilot program is now open. Have a look feel free to share with colleagues.
pankbase.org/funding.html
Reposted
📢 #Funding Alert Coming Soon!
#NIDDK plans to publish a NOFO on #DigitalHealth tech for Type 2 #Diabetes care (R01, clinical trial required). From CGMs to virtual coaching, this is your chance to shape the future of diabetes management. Start preparing now!
🔗 dknet.org/about/dknetn...
#NIDDK plans to publish a NOFO on #DigitalHealth tech for Type 2 #Diabetes care (R01, clinical trial required). From CGMs to virtual coaching, this is your chance to shape the future of diabetes management. Start preparing now!
🔗 dknet.org/about/dknetn...
July 3, 2025 at 11:49 PM
📢 #Funding Alert Coming Soon!
#NIDDK plans to publish a NOFO on #DigitalHealth tech for Type 2 #Diabetes care (R01, clinical trial required). From CGMs to virtual coaching, this is your chance to shape the future of diabetes management. Start preparing now!
🔗 dknet.org/about/dknetn...
#NIDDK plans to publish a NOFO on #DigitalHealth tech for Type 2 #Diabetes care (R01, clinical trial required). From CGMs to virtual coaching, this is your chance to shape the future of diabetes management. Start preparing now!
🔗 dknet.org/about/dknetn...
Reposted
Really proud of this Exeter–Stanford collaboration identifying bi-allelic variants in PAX4 as a novel cause of transient neonatal diabetes—the first new genetic cause of this subtype described in over a decade. This work expands our understanding of beta cell development.
🔗 doi.org/10.1016/j.mo...
🔗 doi.org/10.1016/j.mo...
Complete Loss of PAX4 causes Transient Neonatal Diabetes in Humans
Gene discovery studies in individuals with diabetes diagnosed within 6 months of life (neonatal diabetes, NDM) can provide unique insights into the de…
www.sciencedirect.com
July 3, 2025 at 2:23 PM
Really proud of this Exeter–Stanford collaboration identifying bi-allelic variants in PAX4 as a novel cause of transient neonatal diabetes—the first new genetic cause of this subtype described in over a decade. This work expands our understanding of beta cell development.
🔗 doi.org/10.1016/j.mo...
🔗 doi.org/10.1016/j.mo...
Our DEG explorer enables interactive visualizations of differential gene expression within human pancreatic islets. Data was generated from the integrated single-cell RNA sequencing from 140 human donors sourced from HPAP, IIDP, and Prodo. Check out the tutorial here: youtu.be/jL8SgEMF_sg?...
PanKbase Differential Gene Expression Browser - June 2025
YouTube video by PanKbase
youtu.be
July 3, 2025 at 4:55 PM
Our DEG explorer enables interactive visualizations of differential gene expression within human pancreatic islets. Data was generated from the integrated single-cell RNA sequencing from 140 human donors sourced from HPAP, IIDP, and Prodo. Check out the tutorial here: youtu.be/jL8SgEMF_sg?...
#ADA is in full swing. Remember to stop by PanKbase booth 1047 in the NIDDK #Datasciencecorner to catch a demo of our platform at 3:45PM CT today, or tomorrow at 12:30PM or 3:45PM CT. Check out our scRNA and DEG browsers, and learn about PanKgraph, which uses LLM to uncover biological connections.
June 21, 2025 at 6:10 PM
#ADA is in full swing. Remember to stop by PanKbase booth 1047 in the NIDDK #Datasciencecorner to catch a demo of our platform at 3:45PM CT today, or tomorrow at 12:30PM or 3:45PM CT. Check out our scRNA and DEG browsers, and learn about PanKgraph, which uses LLM to uncover biological connections.
Welcome to Chicago! If you're at the 85th Scientific Sessions of the #ADA, stop by the PanKbase booth 1047 in the exhibit hall to learn about the our updated single cell browser, ask questions, or give us feedback. youtu.be/sNEGvSIjh3M?...
PanKbase Single Cell Browser Tutorial - June 2025
YouTube video by PanKbase
youtu.be
June 20, 2025 at 2:09 AM
Welcome to Chicago! If you're at the 85th Scientific Sessions of the #ADA, stop by the PanKbase booth 1047 in the exhibit hall to learn about the our updated single cell browser, ask questions, or give us feedback. youtu.be/sNEGvSIjh3M?...
Romina Bevacqua and PanKbase PI Anna Gloyn (@annagloyn.bsky.social) preview the presentations of #ADA session Genetic Regulation of Beta-Cell Mass and Function in Humans—Lessons from GWAS and Rare Genetics happening June 22, at 1:30 p.m. CT in Room W194 AB www.adameetingnews.org/genetic-regu...
Genetic Regulation of Beta-Cell Mass and Function in Humans—Lessons from GWAS and Rare Genetics - ADA Meeting News
Anna Gloyn, DPhil, and Romina J. Bevacqua, PhD, preview presentations at the 85th Scientific Sessions. Attendees in Chicago can watch the session in-person Sunday, June 22, at 1:30 p.m. CT.
www.adameetingnews.org
June 18, 2025 at 9:54 PM
Romina Bevacqua and PanKbase PI Anna Gloyn (@annagloyn.bsky.social) preview the presentations of #ADA session Genetic Regulation of Beta-Cell Mass and Function in Humans—Lessons from GWAS and Rare Genetics happening June 22, at 1:30 p.m. CT in Room W194 AB www.adameetingnews.org/genetic-regu...
Reposted
Planning your #ADA2025 visit? Don’t miss the NIDDK #DataScience Corner hosted by #dkNET!
📍 Between ADA Member Lounge & Product Theater 1
🗓 Visit during the reception or exhibit hours
🎉 Celebrate 75 years of #NIDDK!
🔗 dknet.org/data-science...
#ADASciSessions
📍 Between ADA Member Lounge & Product Theater 1
🗓 Visit during the reception or exhibit hours
🎉 Celebrate 75 years of #NIDDK!
🔗 dknet.org/data-science...
#ADASciSessions
June 17, 2025 at 2:45 PM
Planning your #ADA2025 visit? Don’t miss the NIDDK #DataScience Corner hosted by #dkNET!
📍 Between ADA Member Lounge & Product Theater 1
🗓 Visit during the reception or exhibit hours
🎉 Celebrate 75 years of #NIDDK!
🔗 dknet.org/data-science...
#ADASciSessions
📍 Between ADA Member Lounge & Product Theater 1
🗓 Visit during the reception or exhibit hours
🎉 Celebrate 75 years of #NIDDK!
🔗 dknet.org/data-science...
#ADASciSessions
PanKbase #ADA poster alert!!! Dr. Ha Vu (@hahvu.bsky.social) will be presenting her work on our PanKbase platform: "PanKbase Integrated Single-Cell Map—A Comprehensive Atlas of Human Pancreatic Islets Unlocking Insights into Type 1 and Type 2 Diabetes" Sunday, June 22 at 12:30p CT (Poster 2121-LB).
June 17, 2025 at 1:06 PM
PanKbase #ADA poster alert!!! Dr. Ha Vu (@hahvu.bsky.social) will be presenting her work on our PanKbase platform: "PanKbase Integrated Single-Cell Map—A Comprehensive Atlas of Human Pancreatic Islets Unlocking Insights into Type 1 and Type 2 Diabetes" Sunday, June 22 at 12:30p CT (Poster 2121-LB).
PanKbase #ADA spotlight: PanKbase PI, Dr. Jie Liu, Associate Professor of Computational Medicine and Bioinformatics
Michigan Medical School will be presenting during the session "Decoding Diabetes—AI-Driven Advances in Genetic Research". June 23rd 3:15 PM - 4:15 PM. Look forward to seeing you there!
Michigan Medical School will be presenting during the session "Decoding Diabetes—AI-Driven Advances in Genetic Research". June 23rd 3:15 PM - 4:15 PM. Look forward to seeing you there!
June 16, 2025 at 2:25 PM
PanKbase #ADA spotlight: PanKbase PI, Dr. Jie Liu, Associate Professor of Computational Medicine and Bioinformatics
Michigan Medical School will be presenting during the session "Decoding Diabetes—AI-Driven Advances in Genetic Research". June 23rd 3:15 PM - 4:15 PM. Look forward to seeing you there!
Michigan Medical School will be presenting during the session "Decoding Diabetes—AI-Driven Advances in Genetic Research". June 23rd 3:15 PM - 4:15 PM. Look forward to seeing you there!
#ADA Presentation Alert: PanKbase's very own Julie Jurgens will be presenting "Mechanisms Linking Adipose Health with Lipid and Glucose Homeostasis" during a session scheduled for Friday June 20 at 5:45pm. Come learn about another resource she is working on pertaining to adipose tissue.
June 13, 2025 at 7:42 PM
#ADA Presentation Alert: PanKbase's very own Julie Jurgens will be presenting "Mechanisms Linking Adipose Health with Lipid and Glucose Homeostasis" during a session scheduled for Friday June 20 at 5:45pm. Come learn about another resource she is working on pertaining to adipose tissue.
PanKbase #ADA2025 spotlight: PI @annagloyn.bsky.social presents Sun. the 22nd at 2pm CDT. Session: Genetic Regulation of Beta-Cell Mass and Function in Humans: Lessons from GWAS and Rare Genetics. Her talk: "Integrating Multiomic Data to Understand Complex Gene Regulatory Networks in Islets"
June 10, 2025 at 1:48 PM
PanKbase #ADA2025 spotlight: PI @annagloyn.bsky.social presents Sun. the 22nd at 2pm CDT. Session: Genetic Regulation of Beta-Cell Mass and Function in Humans: Lessons from GWAS and Rare Genetics. Her talk: "Integrating Multiomic Data to Understand Complex Gene Regulatory Networks in Islets"
We're less than two weeks away from #ADA2025. PanKbase, booth 1047 will be located in the NIDDK #DataScience corner. Come see us to learn more about the platform and meet the PanKbase team.
June 9, 2025 at 7:24 PM
We're less than two weeks away from #ADA2025. PanKbase, booth 1047 will be located in the NIDDK #DataScience corner. Come see us to learn more about the platform and meet the PanKbase team.
What is PanKbase? Watch our introduction video to find out: youtu.be/glGHni2tXGg?....
PanKbase Introduction Video
YouTube video by PanKbase
youtu.be
June 2, 2025 at 6:10 PM
What is PanKbase? Watch our introduction video to find out: youtu.be/glGHni2tXGg?....
Reposted
Honoured to have been elected to the fellowship and excited to contribute to the academy’s mission. This recognition reflects the amazing scientific community I am part of and the incredible trainees and collaborators I’m privileged to work with. Thankful 🙏
Congratulations to the 54 exceptional scientists who have been elected to the Academy Fellowship today in recognition of their remarkable contributions to biomedical and health sciences 🎉
👉 Discover more: ow.ly/Cf7K50VWSRi
#HealthResearch #HealthInnovation #AcademyFellows
👉 Discover more: ow.ly/Cf7K50VWSRi
#HealthResearch #HealthInnovation #AcademyFellows
May 22, 2025 at 6:47 PM
Honoured to have been elected to the fellowship and excited to contribute to the academy’s mission. This recognition reflects the amazing scientific community I am part of and the incredible trainees and collaborators I’m privileged to work with. Thankful 🙏
Reposted
🎉 Celebrate 75 years of research excellence! The #NIDDK 75th Anniversary Collection is now live with open-access articles in #Diabetes & Diabetes Care, highlighting major milestones in diabetes research. 🔬📚
Check it out: dknet.org/about/dknetn...
Check it out: dknet.org/about/dknetn...
April 24, 2025 at 9:00 PM
🎉 Celebrate 75 years of research excellence! The #NIDDK 75th Anniversary Collection is now live with open-access articles in #Diabetes & Diabetes Care, highlighting major milestones in diabetes research. 🔬📚
Check it out: dknet.org/about/dknetn...
Check it out: dknet.org/about/dknetn...