We recently added a preprint version of our scTrimClust method for robust analysis of trimmed single cell clusters to biorxiv www.biorxiv.org/content/10.1... #rstats #scRNAseq #bioinformatics #singlecell

The Comparative Genomics and Data Science (CGDS) Core at MDI Bio Lab is looking for a Bioinformatician/Programmer to join our team. This position blends research support with teaching. If you're passionate about #datascience, #genomics, and mentoring, we want to hear from you!

🧪 🤝 🖥️ 🧬

16 tools/papers for multi-sample multi-group single-cell RNAseq differential expression analysis 🧵 👇

MIT offering travel advice (or rather do not travel advice) for international visitors and green card holders.

If folks at other institutions are receiving similar guidance, please consider sharing here.

Please be as safe as you can.

New preprint alert! 🚀 @simongraf.bsky.social showcases dice and domino plots for intuitive data visualization. Check it out: github.com/maflot/Dicep... – a great tool for making complex data more accessible. #preprint #dataviz #Parkinsons #DLB #Covid19 #bioinformatics

Stanford and Cornell just released "Block Diffusion" - an exciting new kid on the LLM block! It is quite exciting to see that LLMs may finally have reached their paralle-inference moment:

Paper: arxiv.org/abs/2503.09573
Repo: github.com/kuleshov-gro...

#ML #MachineLearning #AI

We are delighted to announce the release of ellmer, an R package for accessing the power of LLMs in R!

ellmer supports a variety of model providers. Chat, tool call, stream API calls, extract structured data, and more!

Learn about it here: posit.co/blog/announc...

#RStats #AI #LLM

AI Agents are the next generation of GenAI Innovation!

#ArtificialIntelligence #AI #RAG #AgenticAI #AIagentInnovation #AIAgents #LLMs #LLM #GenerativeAI #GenAI #technology #TechRevolution #tech #LRM

(1/3) Natural Language Processing with Deep Learning 🚀

Stanford released yesterday a new version of their NLP with Deep Learning course (CS224N). This course by Prof. Chris Manning is, in my opinion, one of the best resources for getting started with NLP and LLM.
#AI #LLM #NLP #Python #datascience

Want to give your AI assistant access to files, real-time data, or custom tools? Model Context Protocol (MCP) is changing how LLMs interact with external systems - like USB for AI! Check out my latest tutorial to see how it works with Claude, Cursor, and more. #AI #MCP #LLM

youtu.be/nNLshWCoe0o

Expression of interest is now open for our Image Processing with #Python course - ideal for researchers who expect to be producing volumes of image data that would benefit from some automated analysis.

👉 buff.ly/e8BX2Pz

#datacarpentry #bioinformatics 🖥️ 🧬

Another classic! I wish he would do a 2nd edition...

Inferring single-cell resolution spatial gene expression via fusing spot-based spatial transcriptomics, location and histology using GCN https://www.biorxiv.org/content/10.1101/2024.10.27.620535v1