MSAID
@msaid-de.bsky.social
MSAID transforms the way scientists analyze proteomics data
🌐 https://www.msaid.de
➡️ Request a Free CHIMERYS Demo: https://www.msaid.de/chimerys
Follow us: https://linktr.ee/msaid_de
#TeamProteomics #TeamMassSpec
🌐 https://www.msaid.de
➡️ Request a Free CHIMERYS Demo: https://www.msaid.de/chimerys
Follow us: https://linktr.ee/msaid_de
#TeamProteomics #TeamMassSpec
Good morning Toronto! “On Day 2 Florian presents in Poster Session 2 (1:15-3:15 PM): “A universal search algorithm for bottom-up proteomics” – an intelligent search algorithm that deconvolutes chimeric fragmentation spectra across DDA, DIA and PRM workflows. Make sure to stop by. #HUPO2025”
November 11, 2025 at 1:45 PM
Good morning Toronto! “On Day 2 Florian presents in Poster Session 2 (1:15-3:15 PM): “A universal search algorithm for bottom-up proteomics” – an intelligent search algorithm that deconvolutes chimeric fragmentation spectra across DDA, DIA and PRM workflows. Make sure to stop by. #HUPO2025”
Good morning Toronto! Today at #HUPO2025 Poster Session 1 (1:15-3:15 PM) we are presenting “A scalable, cloud-based proteomics platform for the masses”. Stop by Alex' poster or Booth #403 or drop a line if you’re curious about large-scale reproducible proteomics. #TeamMassSpec
November 10, 2025 at 1:45 PM
Good morning Toronto! Today at #HUPO2025 Poster Session 1 (1:15-3:15 PM) we are presenting “A scalable, cloud-based proteomics platform for the masses”. Stop by Alex' poster or Booth #403 or drop a line if you’re curious about large-scale reproducible proteomics. #TeamMassSpec
Thrilled to be attending #HUPO2025 in Toronto! Visit us at Booth #403, where we’ll be presenting the newest updates to our proteomics platform and unveiling CHIMERYS 5. We can’t wait to engage with all of you. #Proteomics #TeamMassSpec
November 10, 2025 at 10:05 AM
Thrilled to be attending #HUPO2025 in Toronto! Visit us at Booth #403, where we’ll be presenting the newest updates to our proteomics platform and unveiling CHIMERYS 5. We can’t wait to engage with all of you. #Proteomics #TeamMassSpec
Last day at #ASMS2025! Don’t miss our talk today, featuring the MSAID Platform — a scalable, cloud-based solution designed for bottom-up proteomics.
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
June 5, 2025 at 1:05 PM
Last day at #ASMS2025! Don’t miss our talk today, featuring the MSAID Platform — a scalable, cloud-based solution designed for bottom-up proteomics.
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
We're off to our poster session at #ASMS2025! Join us at posters TP504 and TP507 to hear about our spectrum-centric analysis of timsTOF data and the latest updates on CHIMERYS, a universal search algorithm for bottom-up proteomics.
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
June 3, 2025 at 1:06 PM
We're off to our poster session at #ASMS2025! Join us at posters TP504 and TP507 to hear about our spectrum-centric analysis of timsTOF data and the latest updates on CHIMERYS, a universal search algorithm for bottom-up proteomics.
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
Good morning #ASMS2025! See you soon in Room 322 at the Baltimore Convention Center for our breakfast seminar. We look forward to seeing you there!
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
June 3, 2025 at 10:31 AM
Good morning #ASMS2025! See you soon in Room 322 at the Baltimore Convention Center for our breakfast seminar. We look forward to seeing you there!
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
Hello #ASMS2025! Get ready for two exciting presentations from our team in Baltimore — happening tomorrow!
🔗 msaid.de/conferences/...
📍 Stop by Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
🔗 msaid.de/conferences/...
📍 Stop by Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
June 2, 2025 at 9:30 PM
Hello #ASMS2025! Get ready for two exciting presentations from our team in Baltimore — happening tomorrow!
🔗 msaid.de/conferences/...
📍 Stop by Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
🔗 msaid.de/conferences/...
📍 Stop by Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
Join us tomorrow morning for a Breakfast Seminar at #ASMS2025 and get a first look at the latest updates to CHIMERYS 5 and the MSAID Platform.
🔗 Save your spot here: msaid.de/conferences/...
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
🔗 Save your spot here: msaid.de/conferences/...
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
June 2, 2025 at 9:01 PM
Join us tomorrow morning for a Breakfast Seminar at #ASMS2025 and get a first look at the latest updates to CHIMERYS 5 and the MSAID Platform.
🔗 Save your spot here: msaid.de/conferences/...
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
🔗 Save your spot here: msaid.de/conferences/...
#TeamProteomics #TeamMassSpec #Proteomics #MassSpectrometry
Do not miss our talk next Thursday at #ASMS2025 on the MSAID Platform—a scalable, cloud-based solution for bottom-up proteomics.
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
May 28, 2025 at 10:02 AM
Do not miss our talk next Thursday at #ASMS2025 on the MSAID Platform—a scalable, cloud-based solution for bottom-up proteomics.
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
📅 June 5 | 3:30–3:50pm | Hall AB
🔗 www.msaid.de/conferences/...
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
Are you attending #ASMS2025? Don’t miss our talk on Double Dipping: Confirmation Bias Inflates DIA Data Completeness, revealing how two-pass searches and sample-specific spectral libraries can overstate data completeness and affect FDR control.
🔗 www.msaid.de/conferences/...
#TeamMassSpec
🔗 www.msaid.de/conferences/...
#TeamMassSpec
May 27, 2025 at 11:01 AM
Are you attending #ASMS2025? Don’t miss our talk on Double Dipping: Confirmation Bias Inflates DIA Data Completeness, revealing how two-pass searches and sample-specific spectral libraries can overstate data completeness and affect FDR control.
🔗 www.msaid.de/conferences/...
#TeamMassSpec
🔗 www.msaid.de/conferences/...
#TeamMassSpec
Only one week left for #ASMS2025! Join us for our talk on accurate and fast zero-shot peptide spectrum prediction, featuring a deep learning approach that predicts fragment ion intensities—even for peptides with unseen post-translational modifications.
🔗 www.msaid.de/conferences/...
#TeamMassSpec
🔗 www.msaid.de/conferences/...
#TeamMassSpec
May 26, 2025 at 12:57 PM
Only one week left for #ASMS2025! Join us for our talk on accurate and fast zero-shot peptide spectrum prediction, featuring a deep learning approach that predicts fragment ion intensities—even for peptides with unseen post-translational modifications.
🔗 www.msaid.de/conferences/...
#TeamMassSpec
🔗 www.msaid.de/conferences/...
#TeamMassSpec
Take a look at the scientific posters we will showcase at #ASMS2025, featuring our cutting-edge research:
🔗 Learn more: www.msaid.de/conferences/...
📍 Make sure to visit us at Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
🔗 Learn more: www.msaid.de/conferences/...
📍 Make sure to visit us at Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
May 23, 2025 at 11:39 AM
Take a look at the scientific posters we will showcase at #ASMS2025, featuring our cutting-edge research:
🔗 Learn more: www.msaid.de/conferences/...
📍 Make sure to visit us at Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
🔗 Learn more: www.msaid.de/conferences/...
📍 Make sure to visit us at Booth #203
#TeamMassSpec #TeamProteomics #Proteomics #MassSpectrometry
Only 2 weeks until #ASMS2025 in Baltimore! Don’t miss the exciting talks our team will present during the conference.
🔗 Read more: msaid.de/conferences/...
📍Visit us at Booth 203—our team looks forward to connecting and engaging in insightful scientific discussions!
#TeamMassSpec #TeamProteomics
🔗 Read more: msaid.de/conferences/...
📍Visit us at Booth 203—our team looks forward to connecting and engaging in insightful scientific discussions!
#TeamMassSpec #TeamProteomics
May 20, 2025 at 12:00 PM
Only 2 weeks until #ASMS2025 in Baltimore! Don’t miss the exciting talks our team will present during the conference.
🔗 Read more: msaid.de/conferences/...
📍Visit us at Booth 203—our team looks forward to connecting and engaging in insightful scientific discussions!
#TeamMassSpec #TeamProteomics
🔗 Read more: msaid.de/conferences/...
📍Visit us at Booth 203—our team looks forward to connecting and engaging in insightful scientific discussions!
#TeamMassSpec #TeamProteomics
We are excited to announce that MSAID's Information Security Management System (ISMS) was recently certified according to ISO/IEC 27001:2022 by TÜV SÜD! Achieving this milestone highlights our commitment to meet rigorous standards for information security.🔒
#ISO27001 #TÜVSüd #DataSecurity #AI
#ISO27001 #TÜVSüd #DataSecurity #AI
May 15, 2025 at 1:24 PM
We are excited to announce that MSAID's Information Security Management System (ISMS) was recently certified according to ISO/IEC 27001:2022 by TÜV SÜD! Achieving this milestone highlights our commitment to meet rigorous standards for information security.🔒
#ISO27001 #TÜVSüd #DataSecurity #AI
#ISO27001 #TÜVSüd #DataSecurity #AI
Join us for our Breakfast Seminar at #ASMS2025 and discover the latest updates to CHIMERYS 5 and the MSAID Platform. Learn about new features and hear real-world applications from fellow scientists who are using our technology in their research.
🔗 Register here: www.msaid.de/conferences/...
🔗 Register here: www.msaid.de/conferences/...
May 12, 2025 at 12:40 PM
Join us for our Breakfast Seminar at #ASMS2025 and discover the latest updates to CHIMERYS 5 and the MSAID Platform. Learn about new features and hear real-world applications from fellow scientists who are using our technology in their research.
🔗 Register here: www.msaid.de/conferences/...
🔗 Register here: www.msaid.de/conferences/...
Calling all #TeamMassSpec enthusiasts! 🚀 Join us this June at #ASMS2025 in Baltimore. Visit us at booth #203 and do not miss our breakfast seminar, where we will unveil the latest MSAID Platform updates and launch CHIMERYS 5.
🔗Register here:
www.msaid.de/conferences/...
#TeamProteomics #Proteomics
🔗Register here:
www.msaid.de/conferences/...
#TeamProteomics #Proteomics
April 29, 2025 at 8:17 AM
Calling all #TeamMassSpec enthusiasts! 🚀 Join us this June at #ASMS2025 in Baltimore. Visit us at booth #203 and do not miss our breakfast seminar, where we will unveil the latest MSAID Platform updates and launch CHIMERYS 5.
🔗Register here:
www.msaid.de/conferences/...
#TeamProteomics #Proteomics
🔗Register here:
www.msaid.de/conferences/...
#TeamProteomics #Proteomics
🔄 Fig 6: CHIMERYS enables fair DDA vs DIA comparisons.
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
7/7
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
7/7
April 22, 2025 at 11:10 AM
🔄 Fig 6: CHIMERYS enables fair DDA vs DIA comparisons.
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
7/7
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
7/7
💡 Fig 5: CHIMERYS unlocks #directInfusion proteomics (DISPA) — library-free!
→ Up to 3× more IDs result in richer functional insights
→ Same #deepLearning model and data processing as for DDA & DIA
Any mass spec-data, no special tuning, just deeper results.
6/7
→ Up to 3× more IDs result in richer functional insights
→ Same #deepLearning model and data processing as for DDA & DIA
Any mass spec-data, no special tuning, just deeper results.
6/7
April 22, 2025 at 11:10 AM
💡 Fig 5: CHIMERYS unlocks #directInfusion proteomics (DISPA) — library-free!
→ Up to 3× more IDs result in richer functional insights
→ Same #deepLearning model and data processing as for DDA & DIA
Any mass spec-data, no special tuning, just deeper results.
6/7
→ Up to 3× more IDs result in richer functional insights
→ Same #deepLearning model and data processing as for DDA & DIA
Any mass spec-data, no special tuning, just deeper results.
6/7
📐 Fig 4: CHIMERYS quantifies peptides directly from chimeric #MS2 spectra. How? Deconvolution!
→ #PRM-level precision with r = 0.99 vs Skyline
→ CV performance on par with established DIA algorithms
No libraries. No manual curation. Straight from data to insights.
5/7
→ #PRM-level precision with r = 0.99 vs Skyline
→ CV performance on par with established DIA algorithms
No libraries. No manual curation. Straight from data to insights.
5/7
April 22, 2025 at 11:10 AM
📐 Fig 4: CHIMERYS quantifies peptides directly from chimeric #MS2 spectra. How? Deconvolution!
→ #PRM-level precision with r = 0.99 vs Skyline
→ CV performance on par with established DIA algorithms
No libraries. No manual curation. Straight from data to insights.
5/7
→ #PRM-level precision with r = 0.99 vs Skyline
→ CV performance on par with established DIA algorithms
No libraries. No manual curation. Straight from data to insights.
5/7
🚀 Fig 3: In DIA, complexity skyrockets. No problem for CHIMERYS!
→ CHIMERYS delivers high ID rates with better FDR control than other solutions
→ More informative fragment utilization yields more reliable #quantification
It handles #DIA data in a spectrum-centric fashion.
4/7
→ CHIMERYS delivers high ID rates with better FDR control than other solutions
→ More informative fragment utilization yields more reliable #quantification
It handles #DIA data in a spectrum-centric fashion.
4/7
April 22, 2025 at 11:10 AM
🚀 Fig 3: In DIA, complexity skyrockets. No problem for CHIMERYS!
→ CHIMERYS delivers high ID rates with better FDR control than other solutions
→ More informative fragment utilization yields more reliable #quantification
It handles #DIA data in a spectrum-centric fashion.
4/7
→ CHIMERYS delivers high ID rates with better FDR control than other solutions
→ More informative fragment utilization yields more reliable #quantification
It handles #DIA data in a spectrum-centric fashion.
4/7
📈 Fig 2: Challenging data? CHIMERYS shines!
Extract more IDs from any DDA data — good for revisiting legacy data, even low-res.
→ 4x more throughput without loss in IDs
→ 2x more IDs at the same throughput
→ Cloud-based for speed & scalability
Unveil secrets older data hold!
3/7
Extract more IDs from any DDA data — good for revisiting legacy data, even low-res.
→ 4x more throughput without loss in IDs
→ 2x more IDs at the same throughput
→ Cloud-based for speed & scalability
Unveil secrets older data hold!
3/7
April 22, 2025 at 11:10 AM
📈 Fig 2: Challenging data? CHIMERYS shines!
Extract more IDs from any DDA data — good for revisiting legacy data, even low-res.
→ 4x more throughput without loss in IDs
→ 2x more IDs at the same throughput
→ Cloud-based for speed & scalability
Unveil secrets older data hold!
3/7
Extract more IDs from any DDA data — good for revisiting legacy data, even low-res.
→ 4x more throughput without loss in IDs
→ 2x more IDs at the same throughput
→ Cloud-based for speed & scalability
Unveil secrets older data hold!
3/7
🚨 New in @naturemethods.bsky.social
#CHIMERYS has already transformed #proteomics since 2022, powering DDA, DIA & PRM analysis in a single workflow.
Wanna know how CHIMERYS works? 👉 www.nature.com/articles/s41...
#TeamMassSpec #NatureMethods #ASMS2025 🧪🔬
1/7
#CHIMERYS has already transformed #proteomics since 2022, powering DDA, DIA & PRM analysis in a single workflow.
Wanna know how CHIMERYS works? 👉 www.nature.com/articles/s41...
#TeamMassSpec #NatureMethods #ASMS2025 🧪🔬
1/7
April 22, 2025 at 11:10 AM
🚨 New in @naturemethods.bsky.social
#CHIMERYS has already transformed #proteomics since 2022, powering DDA, DIA & PRM analysis in a single workflow.
Wanna know how CHIMERYS works? 👉 www.nature.com/articles/s41...
#TeamMassSpec #NatureMethods #ASMS2025 🧪🔬
1/7
#CHIMERYS has already transformed #proteomics since 2022, powering DDA, DIA & PRM analysis in a single workflow.
Wanna know how CHIMERYS works? 👉 www.nature.com/articles/s41...
#TeamMassSpec #NatureMethods #ASMS2025 🧪🔬
1/7
🔄 Fig 6: CHIMERYS enables fair DDA vs DIA comparisons.
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
April 22, 2025 at 10:57 AM
🔄 Fig 6: CHIMERYS enables fair DDA vs DIA comparisons.
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!
→ Same algorithm, consistent FDR
→ IDs vs data completeness: tune your workflow to your needs
Unify your data analysis workflow with #CHIMERYS: choose the mode, not the model!