Max Wilkinson
@maxewilkinson.bsky.social
keen on reverse transcription | also keen on spliceosomes | cryoEM dabbler
Assistant Member @MSKCC
Formerly post-doc @MIT
Formerly-formerly PhD @MRC_LMB
Formerly formerly-formerly Otago Uni
Kiwi 🥝 🇳🇿
https://wilkinsonlab.bio/
Assistant Member @MSKCC
Formerly post-doc @MIT
Formerly-formerly PhD @MRC_LMB
Formerly formerly-formerly Otago Uni
Kiwi 🥝 🇳🇿
https://wilkinsonlab.bio/
please look here for more information about a postdoc position careers.mskcc.org/vacancies/93...
93229-Postdoctoral Researcher – Laboratory of Max Wilkinson | Memorial Sloan Kettering Cancer Center
careers.mskcc.org
October 31, 2025 at 7:12 PM
please look here for more information about a postdoc position careers.mskcc.org/vacancies/93...
there are a few solved phage tail structures, do any of them fit the density ok? I think most tailed phages have the same fold for the major tail protein. The pitch and twist also seem similar
October 5, 2025 at 5:31 PM
there are a few solved phage tail structures, do any of them fit the density ok? I think most tailed phages have the same fold for the major tail protein. The pitch and twist also seem similar
Is that a phage tail in Fig 4?? 👀
October 5, 2025 at 1:47 PM
Is that a phage tail in Fig 4?? 👀
Really interesting q! It depends if insect rDNA::R2 inactivation is targeted, e.g. by piRNAs. If so, then maybe there's no problem because mammalian lineages lost R2 and so might have also lost specific defences. But if rDNA has inherent quality control / self-silencing, then this could happen.
July 3, 2025 at 3:49 PM
Really interesting q! It depends if insect rDNA::R2 inactivation is targeted, e.g. by piRNAs. If so, then maybe there's no problem because mammalian lineages lost R2 and so might have also lost specific defences. But if rDNA has inherent quality control / self-silencing, then this could happen.
Full story here!
We hope this expands the toolkit of retrotransposon-based gene editors. Also, check out related work from Kathy Collins lab, who also illuminated how R2 can be used for mammalian genome engineering, and @akankshathawani.bsky.social who also recently solved an R2Tg structure! (fin)
We hope this expands the toolkit of retrotransposon-based gene editors. Also, check out related work from Kathy Collins lab, who also illuminated how R2 can be used for mammalian genome engineering, and @akankshathawani.bsky.social who also recently solved an R2Tg structure! (fin)
Structure and biochemistry-guided engineering of an all-RNA system for DNA insertion with R2 retrotransposons - Nature Communications
R2 retrotransposons are natural RNA guided gene insertion systems. Here, Edmonds et al. characterize the structure and biochemistry of an avian R2 and engineer a compact, all-RNA system to integrate D...
doi.org
July 3, 2025 at 3:21 AM
Full story here!
We hope this expands the toolkit of retrotransposon-based gene editors. Also, check out related work from Kathy Collins lab, who also illuminated how R2 can be used for mammalian genome engineering, and @akankshathawani.bsky.social who also recently solved an R2Tg structure! (fin)
We hope this expands the toolkit of retrotransposon-based gene editors. Also, check out related work from Kathy Collins lab, who also illuminated how R2 can be used for mammalian genome engineering, and @akankshathawani.bsky.social who also recently solved an R2Tg structure! (fin)
This project was a huge team effort.
The hugest shoutout to @kedmonds.bsky.social for her HEROIC engineering and optimisation (+ birb drawing 🐦🥚)
Also to Hongyu Chen and Dangliang Liu for RNA chemistry, Feng Zhang for fearless leadership, and all the amazing authors who made this possible. (6/n)
The hugest shoutout to @kedmonds.bsky.social for her HEROIC engineering and optimisation (+ birb drawing 🐦🥚)
Also to Hongyu Chen and Dangliang Liu for RNA chemistry, Feng Zhang for fearless leadership, and all the amazing authors who made this possible. (6/n)
July 3, 2025 at 3:21 AM
This project was a huge team effort.
The hugest shoutout to @kedmonds.bsky.social for her HEROIC engineering and optimisation (+ birb drawing 🐦🥚)
Also to Hongyu Chen and Dangliang Liu for RNA chemistry, Feng Zhang for fearless leadership, and all the amazing authors who made this possible. (6/n)
The hugest shoutout to @kedmonds.bsky.social for her HEROIC engineering and optimisation (+ birb drawing 🐦🥚)
Also to Hongyu Chen and Dangliang Liu for RNA chemistry, Feng Zhang for fearless leadership, and all the amazing authors who made this possible. (6/n)
RNA stability may limit efficiency. With help from Xiao Wang and her lab, we added chemical modifications to protect donor RNA from exonucleases.
Combined with LNP delivery, this boosted integration efficiency to >80% in multiple human cell lines, all with an RNA system. Which is kinda nuts. (5/n)
Combined with LNP delivery, this boosted integration efficiency to >80% in multiple human cell lines, all with an RNA system. Which is kinda nuts. (5/n)
July 3, 2025 at 3:21 AM
RNA stability may limit efficiency. With help from Xiao Wang and her lab, we added chemical modifications to protect donor RNA from exonucleases.
Combined with LNP delivery, this boosted integration efficiency to >80% in multiple human cell lines, all with an RNA system. Which is kinda nuts. (5/n)
Combined with LNP delivery, this boosted integration efficiency to >80% in multiple human cell lines, all with an RNA system. Which is kinda nuts. (5/n)
The fabulous Grace then took over. She replaced parts of R2Tg RNA with custom sequences — “tricking” the retrotransposon into integrating cargo instead of itself.
She then defined the minimal R2 elements required for integration, leading to a compact, efficient “mini donor”. (4/n)
She then defined the minimal R2 elements required for integration, leading to a compact, efficient “mini donor”. (4/n)
July 3, 2025 at 3:21 AM
The fabulous Grace then took over. She replaced parts of R2Tg RNA with custom sequences — “tricking” the retrotransposon into integrating cargo instead of itself.
She then defined the minimal R2 elements required for integration, leading to a compact, efficient “mini donor”. (4/n)
She then defined the minimal R2 elements required for integration, leading to a compact, efficient “mini donor”. (4/n)
We found that the R2 retrotransposon from zebra finch (Taeniopygia guttata, “R2Tg”) looked really promising! I had fun playing around with its biochemistry, and solved the cryo-EM structure of it copying its own RNA. We found key features that differ from the more well-studied insect R2. (3/n)
July 3, 2025 at 3:21 AM
We found that the R2 retrotransposon from zebra finch (Taeniopygia guttata, “R2Tg”) looked really promising! I had fun playing around with its biochemistry, and solved the cryo-EM structure of it copying its own RNA. We found key features that differ from the more well-studied insect R2. (3/n)
R2 retrotransposons are neat! They're pretty widespread across the animal kingdom, and they propagate by copying themselves into ribosomal DNA, a highly repetitive region of the genome.
This natural system inspired our design: we thought the rDNA could be a good 'safe harbour' for transgenes. (2/n)
This natural system inspired our design: we thought the rDNA could be a good 'safe harbour' for transgenes. (2/n)
July 3, 2025 at 3:21 AM
R2 retrotransposons are neat! They're pretty widespread across the animal kingdom, and they propagate by copying themselves into ribosomal DNA, a highly repetitive region of the genome.
This natural system inspired our design: we thought the rDNA could be a good 'safe harbour' for transgenes. (2/n)
This natural system inspired our design: we thought the rDNA could be a good 'safe harbour' for transgenes. (2/n)
big fan of southern blots!! Do you have any ideas why the 3'UTR is not required?
April 9, 2025 at 7:27 PM
big fan of southern blots!! Do you have any ideas why the 3'UTR is not required?
absolute pleasure working on this with @guilhemfaure.bsky.social, Makoto Saito, other great colleagues, and our fearless leader Feng Zhang.
Lots more details here: www.science.org/doi/10.1126/...
(I'll try to make a fancier movie in time for the press version 🤞🤞)
(hashtag #TIGR #Tas)
Lots more details here: www.science.org/doi/10.1126/...
(I'll try to make a fancier movie in time for the press version 🤞🤞)
(hashtag #TIGR #Tas)
TIGR-Tas: A family of modular RNA-guided DNA-targeting systems in prokaryotes and their viruses
RNA-guided systems provide remarkable versatility, enabling diverse biological functions. Through iterative structural and sequence homology-based mining starting with a guide RNA-interaction domain o...
www.science.org
March 1, 2025 at 12:18 AM
absolute pleasure working on this with @guilhemfaure.bsky.social, Makoto Saito, other great colleagues, and our fearless leader Feng Zhang.
Lots more details here: www.science.org/doi/10.1126/...
(I'll try to make a fancier movie in time for the press version 🤞🤞)
(hashtag #TIGR #Tas)
Lots more details here: www.science.org/doi/10.1126/...
(I'll try to make a fancier movie in time for the press version 🤞🤞)
(hashtag #TIGR #Tas)
TIGR might have some advantages over CRISPR in genome editing (absolutely tiny, no PAM), but more importantly it's just some really neat, mysterious biology. Maybe TIGR is used by phages to fight other viruses? We don't know yet! Many many many questions left.
March 1, 2025 at 12:18 AM
TIGR might have some advantages over CRISPR in genome editing (absolutely tiny, no PAM), but more importantly it's just some really neat, mysterious biology. Maybe TIGR is used by phages to fight other viruses? We don't know yet! Many many many questions left.
it does, which is the main inaccuracy of the video! As it happens, the RT does actually make dsDNA, but only after synthesising some repeats and then changing direction to perform second-strand synthesis. This would be fun to animate, but I thought it would make the movie too confusing.
December 4, 2024 at 3:09 AM
it does, which is the main inaccuracy of the video! As it happens, the RT does actually make dsDNA, but only after synthesising some repeats and then changing direction to perform second-strand synthesis. This would be fun to animate, but I thought it would make the movie too confusing.
me plz me plz (recent video on my page, more to come)
November 25, 2024 at 2:55 AM
me plz me plz (recent video on my page, more to come)
for less wiggly proteins and more actual science, please go here www.science.org/doi/full/10....
www.science.org
November 18, 2024 at 7:05 PM
for less wiggly proteins and more actual science, please go here www.science.org/doi/full/10....