Matthieu Foll
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matthieufoll.bsky.social
Matthieu Foll
@matthieufoll.bsky.social
Computational Cancer Genomics team leader at IARC-WHO. Views are my own. co-PI of the Rare Cancers Genomics initiative rarecancersgenomics.com.
Playing with ⁦@github⁩ #Codespaces beta. First thing tried is of course running ⁦@nextflowio⁩!
December 7, 2024 at 2:54 PM
Pr H. Chneiweiss presenting ongoing @WHO efforts for a global governance for human genome editing at the 1st International symposium on Human Genomics organized by @fr_genomics #FG_ISHG2020
December 7, 2024 at 2:53 PM
You will also get a plot for each detected variant (red dot) showing the estimated error model (blue dots)
December 7, 2024 at 2:52 PM
Needelstack takes a series of BAM files (ideally >20) to estimate sequencing errors and detect variants output in a VCF. Thanks to @nextflowio and #docker #singularity you can try it with zero efforts on our test data or on your own data (https://github.com/IARCbioinfo/needlestack#usage): 👇👇
December 7, 2024 at 2:52 PM
Best poster award for @nl_alcala from @IARCWHO @ECSA_IARC for our work on genomics of rare lung neuroendocrine neoplasms with @gabriel_aurelie @LiseMangiante @FCLynnette at #ForumCLARA
December 7, 2024 at 2:52 PM
Now presenting!
December 7, 2024 at 2:52 PM
December 7, 2024 at 2:52 PM
Lise Mangiante from ⁦@IARCWHO⁩ ⁦@ECSA_IARC⁩ teasing our poster (50) with ⁦@nl_Alcala⁩ and ⁦@FCLynnette⁩ at #ForumCLARA
December 7, 2024 at 2:51 PM
Hopefully molecular data will inform future classifications and guide personalised therapeutic approaches
December 7, 2024 at 2:51 PM
With @nextflowio, @fredebibs can focus on what he does rather on how to do it! #nfhack17
December 7, 2024 at 2:51 PM