Luke Campillo
@lcampillo.bsky.social
Evolutionary biologist interested in birds, islands, and speciation. Working to be a better ally. Postdoc with HCSU/USGS. He/Him
Can you run sequential slurm arrays with one job submission? E.g., make bam files for all inds, then make individual VCFs when bam step is complete.
I currently do this with separate job submissions, but would like to combine into one job submission.
Thanks! #bioinformatics
I currently do this with separate job submissions, but would like to combine into one job submission.
Thanks! #bioinformatics
January 15, 2025 at 12:16 AM
Can you run sequential slurm arrays with one job submission? E.g., make bam files for all inds, then make individual VCFs when bam step is complete.
I currently do this with separate job submissions, but would like to combine into one job submission.
Thanks! #bioinformatics
I currently do this with separate job submissions, but would like to combine into one job submission.
Thanks! #bioinformatics
Loved that Walkman 💞
December 21, 2024 at 8:37 AM
Loved that Walkman 💞
Reposted by Luke Campillo
Phylogenetics methods announcement: piqtree is out! It exposes selected IQ-TREE2 capabilities within Python, using the cogent3 library as the interface, better enabling pipelines. piqtree is an addition to, not a replacement of, IQ-TREE2.
Full announcement at github.com/iqtree/piqtr...
Full announcement at github.com/iqtree/piqtr...
piqtree: IQ-TREE2 meets Python via cogent3 · iqtree piqtree · Discussion #145
The developers of IQ-TREE2 and cogent3 have joined forces to bring the power of IQ-TREE2 to Python users as piqtree. piqtree exposes selected IQ-TREE2 capabilities within Python, using the cogent3 ...
github.com
December 19, 2024 at 3:49 PM
Phylogenetics methods announcement: piqtree is out! It exposes selected IQ-TREE2 capabilities within Python, using the cogent3 library as the interface, better enabling pipelines. piqtree is an addition to, not a replacement of, IQ-TREE2.
Full announcement at github.com/iqtree/piqtr...
Full announcement at github.com/iqtree/piqtr...
Reposted by Luke Campillo
If you hate statistics like I do, then you'll love my free lectures. Putting science before statistics, 20 lectures from basics of inference & causal modeling to multilevel models & dynamic state space models. It's all free, made with love and sympathy. 🧪 #stats www.youtube.com/playlist?lis...
September 19, 2024 at 10:56 AM
If you hate statistics like I do, then you'll love my free lectures. Putting science before statistics, 20 lectures from basics of inference & causal modeling to multilevel models & dynamic state space models. It's all free, made with love and sympathy. 🧪 #stats www.youtube.com/playlist?lis...
Reposted by Luke Campillo
Trump says he's wants to privatize USPS because it's "unprofitable".
Reminder that the Post Office isn't a for-profit enterprise: it's a public service that guarantees everyone in America reliable, affordable, and universal mail service.
Reminder that the Post Office isn't a for-profit enterprise: it's a public service that guarantees everyone in America reliable, affordable, and universal mail service.
BREAKING: Trump says his team is looking into the privatization of the Postal Service.
December 17, 2024 at 4:31 AM
Trump says he's wants to privatize USPS because it's "unprofitable".
Reminder that the Post Office isn't a for-profit enterprise: it's a public service that guarantees everyone in America reliable, affordable, and universal mail service.
Reminder that the Post Office isn't a for-profit enterprise: it's a public service that guarantees everyone in America reliable, affordable, and universal mail service.
Gahhhhhhh!!! ☺️🥳🤩
This is an exciting start to the week 😎
This is an exciting start to the week 😎
A little late to draw, but the winner of my first ever Bluesky Art Draw is.... @lcampillo.bsky.social!
Thank you so much to everyone who entered, I'll probably be running another one next time I hit a milestone! 🙂
Thank you so much to everyone who entered, I'll probably be running another one next time I hit a milestone! 🙂
Whoop whoop back to 1000 followers, so you know what I haven't done in ages?
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
December 16, 2024 at 8:29 PM
Gahhhhhhh!!! ☺️🥳🤩
This is an exciting start to the week 😎
This is an exciting start to the week 😎
People: don’t you just get a job when you’re a doctor…? You can just be a professor, right?
Me: 👇🏼
Me: 👇🏼
December 13, 2024 at 3:02 AM
People: don’t you just get a job when you’re a doctor…? You can just be a professor, right?
Me: 👇🏼
Me: 👇🏼
Reposted by Luke Campillo
Whoop whoop back to 1000 followers, so you know what I haven't done in ages?
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
December 7, 2024 at 3:04 PM
Whoop whoop back to 1000 followers, so you know what I haven't done in ages?
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
Reposted by Luke Campillo
We have a postdoc position available in the lab on post-copulatory barriers in hybridizing crickets. We have genomic data ready to be analyzed and crickets ready for experiments. This is a great collaborative group and a study system with a lot of potential for new projects. Join us!
November 20, 2024 at 3:14 PM
We have a postdoc position available in the lab on post-copulatory barriers in hybridizing crickets. We have genomic data ready to be analyzed and crickets ready for experiments. This is a great collaborative group and a study system with a lot of potential for new projects. Join us!
Reposted by Luke Campillo
After lots of delay - we just updated the MIT living wage in our stipend database and we are back to only two points above the line! See more: rhettrautsaw.app/shiny/Biolog...
#PhDStipend #Biology @reptilerhett.bsky.social
#PhDStipend #Biology @reptilerhett.bsky.social
December 4, 2024 at 1:53 AM
After lots of delay - we just updated the MIT living wage in our stipend database and we are back to only two points above the line! See more: rhettrautsaw.app/shiny/Biolog...
#PhDStipend #Biology @reptilerhett.bsky.social
#PhDStipend #Biology @reptilerhett.bsky.social
Reposted by Luke Campillo
How much more can he take from us
elon musk i am in your walls
November 29, 2024 at 4:35 AM
How much more can he take from us
Reposted by Luke Campillo
Tapping the wisdom of the SkyMind. I’ve previously developed educational programs in genomics and bioinformatics at the graduate level, as well as undergrad data science program, and now building a broad PhD program in biomed/biological/bioengineering data science. #science #evolution #genomics 1/1
November 25, 2024 at 4:20 PM
Tapping the wisdom of the SkyMind. I’ve previously developed educational programs in genomics and bioinformatics at the graduate level, as well as undergrad data science program, and now building a broad PhD program in biomed/biological/bioengineering data science. #science #evolution #genomics 1/1
This is an amazing resource for students, teachers, and researchers alike!
Thanks for all your hard work creating and maintaining this, Graham 😎😊🤩
#popgen
Thanks for all your hard work creating and maintaining this, Graham 😎😊🤩
#popgen
Just posting this to #popgen
Here's a link to my notes on population & quantitative genetics:
github.com/cooplab/popg...
Hoping to extend it more after the winter holidays, as I'm just finishing up teaching the undergrad version of class.
Here's a link to my notes on population & quantitative genetics:
github.com/cooplab/popg...
Hoping to extend it more after the winter holidays, as I'm just finishing up teaching the undergrad version of class.
Releases · cooplab/popgen-notes
Population genetics notes. Contribute to cooplab/popgen-notes development by creating an account on GitHub.
github.com
November 20, 2024 at 6:10 PM
This is an amazing resource for students, teachers, and researchers alike!
Thanks for all your hard work creating and maintaining this, Graham 😎😊🤩
#popgen
Thanks for all your hard work creating and maintaining this, Graham 😎😊🤩
#popgen
I had been off all social media for months, but since humanity is imploding at an ever increasing rate and I’ve heard we’re all gathering here to mourn its demise… I’m back, baby!✌🏼
November 19, 2024 at 6:43 AM
I had been off all social media for months, but since humanity is imploding at an ever increasing rate and I’ve heard we’re all gathering here to mourn its demise… I’m back, baby!✌🏼
I think if a conference presentation abstract gets accepted as a poster (i.e., not a talk), you should get a $50 gift card to cover printing costs… 🧪
ps: I think giving posters is ultimately more fun and results in more interaction, but they’re still a pain to design and get printed
ps: I think giving posters is ultimately more fun and results in more interaction, but they’re still a pain to design and get printed
April 25, 2024 at 2:29 AM
I think if a conference presentation abstract gets accepted as a poster (i.e., not a talk), you should get a $50 gift card to cover printing costs… 🧪
ps: I think giving posters is ultimately more fun and results in more interaction, but they’re still a pain to design and get printed
ps: I think giving posters is ultimately more fun and results in more interaction, but they’re still a pain to design and get printed
Eclipse [yada yada] totality [blah blah] 🤩
April 8, 2024 at 6:30 PM
Eclipse [yada yada] totality [blah blah] 🤩
Does this place care about real trucks? Or was that only in the other place, the “cyber truck” place…?
April 6, 2024 at 4:10 AM
Does this place care about real trucks? Or was that only in the other place, the “cyber truck” place…?
Reposted by Luke Campillo
Italian wall lizard (Podarcis siculus) Just seven of these were introduced to a backyard in LA in 1994 - now there hundreds of thousands spreading across the city.
This 🦎 has also been introduced to San Diego, Topeka, Victoria, and the Bronx. If you see one of these in North America, let me know!
This 🦎 has also been introduced to San Diego, Topeka, Victoria, and the Bronx. If you see one of these in North America, let me know!
March 29, 2024 at 2:20 PM
Italian wall lizard (Podarcis siculus) Just seven of these were introduced to a backyard in LA in 1994 - now there hundreds of thousands spreading across the city.
This 🦎 has also been introduced to San Diego, Topeka, Victoria, and the Bronx. If you see one of these in North America, let me know!
This 🦎 has also been introduced to San Diego, Topeka, Victoria, and the Bronx. If you see one of these in North America, let me know!
Reposted by Luke Campillo
What in the fresh hell?! Seen on Reddit, with the headline:
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
March 20, 2024 at 4:52 AM
What in the fresh hell?! Seen on Reddit, with the headline:
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
What in the fresh hell?! Seen on Reddit, with the headline:
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
March 20, 2024 at 4:52 AM
What in the fresh hell?! Seen on Reddit, with the headline:
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
“Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻♂️
Amazing scenery above the clouds on my flight from Hilo to Honolulu over the weekend 🤩📸🌅
March 18, 2024 at 6:34 PM
Amazing scenery above the clouds on my flight from Hilo to Honolulu over the weekend 🤩📸🌅
As previously stated, you can’t stop worm!
March 18, 2024 at 6:43 AM
As previously stated, you can’t stop worm!
Reposted by Luke Campillo
Another Elsevier paper with obvious AI-written text.
“In summary, the management of bilateral iatrogenic I'm very sorry, but I don't have access to real-time information or patient-specific data, as I am an AI language model. “
“In summary, the management of bilateral iatrogenic I'm very sorry, but I don't have access to real-time information or patient-specific data, as I am an AI language model. “
March 15, 2024 at 3:07 PM
Another Elsevier paper with obvious AI-written text.
“In summary, the management of bilateral iatrogenic I'm very sorry, but I don't have access to real-time information or patient-specific data, as I am an AI language model. “
“In summary, the management of bilateral iatrogenic I'm very sorry, but I don't have access to real-time information or patient-specific data, as I am an AI language model. “
People: how does ADHD really impact your life…?
Me:
Me:
March 10, 2024 at 3:36 AM
People: how does ADHD really impact your life…?
Me:
Me: