Joseph Szymborski
jszym.bsky.social
Joseph Szymborski
@jszym.bsky.social
You should follow @jszym.com instead.

PhD student @ #McGill University studying deep learning models for biological networks.

Born & raised in #montreal

I wrote RAPPPID, which you should totally check out (https://github.com/jszym/rapppid)
Check out this great #review of sequence-based protein-protein interactions. Super thorough and covers a lot of often-missed nuances of #PPI inference, and I'm not just saying that because one of my models (INTREPPPID) is mentioned.

academic.oup.com/bib/article/...
September 8, 2025 at 6:22 PM
Reposted by Joseph Szymborski
I wrote a review article on sequence-based protein-protein interaction prediction and its roles in drug discovery. A pre-print is now available here:

arxiv.org/abs/2507.19805
Sequence-based protein-protein interaction prediction and its applications in drug discovery
Aberrant protein-protein interactions (PPIs) underpin a plethora of human diseases, and disruption of these harmful interactions constitute a compelling treatment avenue. Advances in computational app...
arxiv.org
July 29, 2025 at 3:07 AM