Just updated my hikemap with our Ardennes hikes!🗺️🥾
One of the perks of living in Belgium: epic trails basically in your backyard 🇧🇪🌳

There are a couple of cool two-day hikes here as well which were (rather painful😅) training sessions for our Norway adventure 🇳🇴🏔️

jhsmit.org/hikes/hikema...

#hiking

Such a pleasure to define HDX-MS states directly in VS code!

#solara #hdxms-datasets

Here in sunny Belgium the tomatos are doing really well this year - they are facing south on the balcony and I invested in some serious pottery

Having some fun with 3DPGA & kingdon (GA library for python) in ipymolstar!

Geometric Algebra feels like magic 🪄; I don't understand it but surely its very powerful 💪

Live example on pycafe: py.cafe/jhsmit/ipymo...

New release for #ipymolstar: I've added a widget for the amazing and very powerful MolViewSpec. This allows you to control the camera📷from python🐍, as well as all other molviewspec features 🎉

ipymolstar repo: github.com/jhsmit/ipymo...
Molviewspec: molstar.org/mol-view-spec/

I have some exciting news to share!!

A cute little boy arrived in our lives early december
Mom & dad are very tired but happy 😃

birth card illustration by Tintenbaum
tintenbaum.com

Here's a neat way to share you protein-annotated data 🚀🧪

Upload your .csv with residue/value data, select data column, colormap and norm to interactively color your protein model.

Then, add title/description and click the button to open a shareable view with url-encoded data and settings.

#ipymolstar v0.0.9: Added click interactions

try it on pycafé: py.cafe/jhsmit/ipymo...

Two-way tertiary/primary structure hover and highlight with #ipymolstar and #altair

Try it on pycafe: py.cafe/jhsmit/ipymo...

I've created this #solara app where you can drag & drop your #alphafold3 .zip file and switch between chain color or plddt colors. Includes 'spin' and theme toggle for maximal viewing pleasure. The screenshot below shows the elusive SecA2/SecB4 complex.
huggingface.co/spaces/Jhsmi...

New in #ipymolstar version 0.0.4: directly load your local data files

`pip install "ipymolstar==0.0.4"`
github.com/Jhsmit/ipymo...

Nice! I've updated the structure reference in our HDX-MS database, here it is rendered in ipymolstar (beta) and colored by HDX-MS Gibbs free energy (blue = rigid, yellow = more flexible)