Jay Hesselberth
@jayhesselberth.bsky.social
RNA technologies. hesselberthlab.org
I have been trying to onboard the 2A peptide pHMM models into Pfam to no avail. If anyone has a contact there, I would appreciate an introduction for a discussion.
github.com/rnabioco/2a-...
github.com/rnabioco/2a-...
GitHub - rnabioco/2a-peptide-search: HMM models of the 2A peptide and DB search results
HMM models of the 2A peptide and DB search results - rnabioco/2a-peptide-search
github.com
June 20, 2025 at 12:27 AM
I have been trying to onboard the 2A peptide pHMM models into Pfam to no avail. If anyone has a contact there, I would appreciate an introduction for a discussion.
github.com/rnabioco/2a-...
github.com/rnabioco/2a-...
NIH funding supporting the HMMER and Infernal software projects has been terminated. NIH states that our work, as well as all other federally funded research at Harvard, is of no benefit to the US.
June 20, 2025 at 12:22 AM
Any word on whether these are all NIAID grants? Or do they include neoepitope mRNA vaccine studies funded by NCI, etc?
March 11, 2025 at 5:24 PM
Any word on whether these are all NIAID grants? Or do they include neoepitope mRNA vaccine studies funded by NCI, etc?
In my experience REPORTER is not updated in real-time. Not sure it's a reliable measure of the effect.
February 20, 2025 at 6:16 PM
In my experience REPORTER is not updated in real-time. Not sure it's a reliable measure of the effect.
I just updated this R data package for NIH EXPORTER data. Can you file an issue with your approach for calculating ICR?
github.com/rnabioco/nih...
github.com/rnabioco/nih...
GitHub - rnabioco/nihexporter: An R data package for NIH EXPORTER data
An R data package for NIH EXPORTER data. Contribute to rnabioco/nihexporter development by creating an account on GitHub.
github.com
February 13, 2025 at 2:36 PM
I just updated this R data package for NIH EXPORTER data. Can you file an issue with your approach for calculating ICR?
github.com/rnabioco/nih...
github.com/rnabioco/nih...
And I forgot the default REPORTER search only lists active grants. This list is pretty long.
February 8, 2025 at 1:08 AM
And I forgot the default REPORTER search only lists active grants. This list is pretty long.
Technically speaking, your last point is incorrect.
(but the NIH REPORTER link doesn't go anywhere useful to confirm this is the same person; I inferred it from the abstract)
(but the NIH REPORTER link doesn't go anywhere useful to confirm this is the same person; I inferred it from the abstract)
February 8, 2025 at 1:01 AM
Technically speaking, your last point is incorrect.
(but the NIH REPORTER link doesn't go anywhere useful to confirm this is the same person; I inferred it from the abstract)
(but the NIH REPORTER link doesn't go anywhere useful to confirm this is the same person; I inferred it from the abstract)
This is on a (very long) to-do list.
November 19, 2024 at 2:15 PM
This is on a (very long) to-do list.
Also crossing "publish with your scientific grandfather" off my bucket list.
November 19, 2024 at 3:08 AM
Also crossing "publish with your scientific grandfather" off my bucket list.