What an incredible trackathon! After two weeks of intense discussions and happy coding (and a lot of groundwork beforehand by @msschwartz21.bsky.social and Caroline Malin-Mayor), this lovely community emerged with a Graph Exchange File Format that is ready to use! Congrats, everyone! 🎉
#geff v1 is released! 🎉 GEFF is a zarr-based Graph Exchange File Format with special support for tracking applications in Python and Java. Thank you to all the amazing developers who contributed at the Janelia 2025 Trackathon! liveimagetrackingtools.org/geff/
October 7, 2025 at 8:38 PM
What an incredible trackathon! After two weeks of intense discussions and happy coding (and a lot of groundwork beforehand by @msschwartz21.bsky.social and Caroline Malin-Mayor), this lovely community emerged with a Graph Exchange File Format that is ready to use! Congrats, everyone! 🎉
Reposted by Jan Funke
E11 Bio is excited to unveil PRISM technology for mapping brain wiring with simple light microscopes. Today, brain mapping in humans and other mammals is bottlenecked by accurate neuron tracing. PRISM uses molecular ID codes and AI to help neurons trace themselves.
Read more: e11.bio/blog/prism
Read more: e11.bio/blog/prism
October 1, 2025 at 2:16 PM
E11 Bio is excited to unveil PRISM technology for mapping brain wiring with simple light microscopes. Today, brain mapping in humans and other mammals is bottlenecked by accurate neuron tracing. PRISM uses molecular ID codes and AI to help neurons trace themselves.
Read more: e11.bio/blog/prism
Read more: e11.bio/blog/prism
How can AI help you to analyze your microscopy images?
Find out at the "Machine Learning for Microscopy Image Analysis" course at the @mblscience.bsky.social in Woods Hole from Aug 22-Sep 6!
Applications are due 🚨 April 30 🚨
Read on for more! 👇
www.mbl.edu/education/ad...
Find out at the "Machine Learning for Microscopy Image Analysis" course at the @mblscience.bsky.social in Woods Hole from Aug 22-Sep 6!
Applications are due 🚨 April 30 🚨
Read on for more! 👇
www.mbl.edu/education/ad...
AI@MBL: Machine Learning for Microscopy Image Analysis | Marine Biological Laboratory
The goal of this course is to familiarize researchers in the life sciences with state-of-the-art deep learning techniques for microscopy image analysis and to introduce them to tools and frameworks th...
www.mbl.edu
April 18, 2025 at 6:48 PM
How can AI help you to analyze your microscopy images?
Find out at the "Machine Learning for Microscopy Image Analysis" course at the @mblscience.bsky.social in Woods Hole from Aug 22-Sep 6!
Applications are due 🚨 April 30 🚨
Read on for more! 👇
www.mbl.edu/education/ad...
Find out at the "Machine Learning for Microscopy Image Analysis" course at the @mblscience.bsky.social in Woods Hole from Aug 22-Sep 6!
Applications are due 🚨 April 30 🚨
Read on for more! 👇
www.mbl.edu/education/ad...
Reposted by Jan Funke
‼️🔬 We start!!! 🎉🤖
Super exciting!!! After years of teaching courses for #DeepLearning for Microscopy and Life Science application, we start today our first “advanced course” @embl.org!
#EMBLDeepLearning
Super exciting!!! After years of teaching courses for #DeepLearning for Microscopy and Life Science application, we start today our first “advanced course” @embl.org!
#EMBLDeepLearning
February 17, 2025 at 8:37 AM
‼️🔬 We start!!! 🎉🤖
Super exciting!!! After years of teaching courses for #DeepLearning for Microscopy and Life Science application, we start today our first “advanced course” @embl.org!
#EMBLDeepLearning
Super exciting!!! After years of teaching courses for #DeepLearning for Microscopy and Life Science application, we start today our first “advanced course” @embl.org!
#EMBLDeepLearning
How can we use machine learning to find subtle patterns in our data and have them visualized?
Read the thread below to find out how!
Or head to @adjavon.bsky.social's blog post and let Simon the duck walk you through it (like a duck of course): tinyurl.com/yy7csdcd
www.biorxiv.org/content/10.1...
Read the thread below to find out how!
Or head to @adjavon.bsky.social's blog post and let Simon the duck walk you through it (like a duck of course): tinyurl.com/yy7csdcd
www.biorxiv.org/content/10.1...
January 15, 2025 at 8:50 PM
How can we use machine learning to find subtle patterns in our data and have them visualized?
Read the thread below to find out how!
Or head to @adjavon.bsky.social's blog post and let Simon the duck walk you through it (like a duck of course): tinyurl.com/yy7csdcd
www.biorxiv.org/content/10.1...
Read the thread below to find out how!
Or head to @adjavon.bsky.social's blog post and let Simon the duck walk you through it (like a duck of course): tinyurl.com/yy7csdcd
www.biorxiv.org/content/10.1...
METAR BSKY 181910Z AUTO VRB06KT 10SM CLR 18/03 A2983
(I do like a blue sky ☺️)
Good to see you all again.
(I do like a blue sky ☺️)
Good to see you all again.
November 18, 2024 at 8:10 PM
METAR BSKY 181910Z AUTO VRB06KT 10SM CLR 18/03 A2983
(I do like a blue sky ☺️)
Good to see you all again.
(I do like a blue sky ☺️)
Good to see you all again.
Reposted by Jan Funke
🚀 Excited to share our paper has been accepted at #NeurIPS! 🎉 We developed a deep learning framework that infers local learning algorithms in the brain by fitting behavioral or neural activity trajectories during learning. We validate on synthetic data and tested on 🪰 behavioral data (1/5 🧵)
November 18, 2024 at 6:18 PM
🚀 Excited to share our paper has been accepted at #NeurIPS! 🎉 We developed a deep learning framework that infers local learning algorithms in the brain by fitting behavioral or neural activity trajectories during learning. We validate on synthetic data and tested on 🪰 behavioral data (1/5 🧵)