Ignacio Arganda-Carreras
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iarganda.bsky.social
Ignacio Arganda-Carreras
@iarganda.bsky.social
810 followers 400 following 89 posts
Bioimage analysis and computer vision enthusiast. Whenever I can, I do software too.

Ikerbasque | University of the Basque Country (UPV/EHU) | DIPC | Biofisika Institute

ORCID: 0000-0003-0229-5722
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iarganda.bsky.social
👀 Please look for the project ID MCIU-NO24/P36 and verify your status.

⏱️ Deadline for corrections / submitting missing documents: 24 November 2025 (inclusive).

If your application appears as *excluded* or *requiring correction*, submit the required documents before that date.
November 11, 2025 at 11:42 AM
iarganda.bsky.social
🗓️ Important update for the candidates!

The provisional list of admitted and excluded applications for the FPI 2025 call (associated with the project TOSBI – MCIU-NO24/P36) has been published by the University of the Basque Country (UPV/EHU).

🔗 Check the list here: www.ehu.eus/documents/29...
www.ehu.eus
November 11, 2025 at 11:42 AM
iarganda.bsky.social
Congrats!! 🤩
October 9, 2025 at 9:23 AM
iarganda.bsky.social
#skyvision 🤓🤗
October 3, 2025 at 8:50 AM
iarganda.bsky.social
In case someone prefers to apply this way, I also opened a LinkedIn job offer:

www.linkedin.com/jobs/view/43...

#phd #bioimaging #deeplearning #bioimageanalysis #joboffer
EHU hiring 4-year PhD Position in Deep Learning for Bioimage Analysis in San Sebastián, Basque Country, Spain | LinkedIn
Posted 8:40:15 AM. The Computer Vision and Pattern Discovery (CVPD) group at the University of the Basque Country…See this and similar jobs on LinkedIn.
www.linkedin.com
October 3, 2025 at 8:44 AM
iarganda.bsky.social
Thanks a lot, @lmescu.bsky.social ! 🤗
October 1, 2025 at 10:10 AM
iarganda.bsky.social
🥲
October 1, 2025 at 5:33 AM
iarganda.bsky.social
Online aquí: naukas.com/2025/09/19/s...
Sigue en directo Naukas Bilbao 15º Aniversario - Naukas
Edición especial 15º Aniversario – Palacio Euskalduna de Bilbao – Viernes 19 y sábado 20 de septiembre. En colaboración con la Cátedra de Cultura Científica de la UPV/EHU hemos preparado un fantástico...
naukas.com
September 20, 2025 at 9:28 AM
iarganda.bsky.social
Oh là là 😍
September 19, 2025 at 5:31 PM
iarganda.bsky.social
And that’s a wrap! I’m flying home. Hope everybody had as much fun as I had 🤗

@ahklemm.bsky.social @perrinegil.bsky.social @tischi.bsky.social you’re awesome!

Big thanks to all speakers & students & @events.embl.org staff for this amazing week 🤩
a cartoon llama is holding a microphone and the words boom are above it
ALT: a cartoon llama is holding a microphone and the words boom are above it
media.tenor.com
September 19, 2025 at 1:57 PM
iarganda.bsky.social
Last but not least, we have @philippeandrey.bsky.social from @inrae-france.bsky.social with Practical session 7: "Statistical spatial analysis and modeling with BIP" 📊

We're learning about 💫BIP (Biological Image Processing)💫, the command-line 🖥️ #BioimageAnalysis solution from his lab.
Webcam view of the classroom of the EMBO course on "Advanced methods in bioimage analysis", during Practical session 7: "Statistical spatial analysis and modeling with BIP", by Philippe Andrey (Inrae, France). Zoom view of the screen of Philippe Andrey (Inrae, France) during Practical session 7: "Statistical spatial analysis and modeling with BIP", at of the EMBO course on "Advanced methods in bioimage analysis". The online participant cameras are shown on top, while a Linux terminal with BIP commands is shown on the bottom.
September 19, 2025 at 1:02 PM
iarganda.bsky.social
... domain adaptation🔃, enhancers✨... How cool is that? 😎
Fynn Beuttenmüller is taking to the students during Practical session 6: "AI for Life Sciences", of the EMBO course on Advanced methods in bioimage analysis at EMBL (Heidelberg, Germany). The screen shows the Ilastik interface displaying an EM section with mitochondria segmented in yellow by a domain-adapted model. Fynn Beuttenmüller is looking at his screen during Practical session 6: "AI for Life Sciences", of the EMBO course on Advanced methods in bioimage analysis at EMBL (Heidelberg, Germany). The screen shows the Ilastik interface displaying an EM section with mitochondria segmented in red by a model enhancer. Panoramic view of the classroom during Practical session 6: "AI for Life Sciences", of the EMBO course on Advanced methods in bioimage analysis at EMBL (Heidelberg, Germany). Fynn Beuttenmüller is taking to the students during the exercises of Practical session 6: "AI for Life Sciences", of the EMBO course on Advanced methods in bioimage analysis at EMBL (Heidelberg, Germany).
September 19, 2025 at 10:47 AM
iarganda.bsky.social
And now Fynn Beuttenmüller from @embl.org is showing us all the cool stuff behind the BioImage Model Zoo 🦒 and @ilastik-team.bsky.social 🖥️🎨

For instance, students learnt how to load and apply the @biapyx.bsky.social models from the zoo into @ilastik-team.bsky.social 😊 ...
Fynn Beuttenmüller addresses the students in the classroom during Practical session 6: "AI for Life Sciences", of the EMBO course on Advanced methods in bioimage analysis at EMBL (Heidelberg, Germany). Screenshot of the screen during Practical session 6: "AI for Life Sciences", of the EMBO course on Advanced methods in bioimage analysis at EMBL (Heidelberg, Germany). The screen shows the Ilastik interface displaying an EM section with mitochondria segmented in yellow by the model trained previously in BiaPy.
September 19, 2025 at 9:58 AM
iarganda.bsky.social
First part of the session was dedicated to @biapyx.bsky.social, learning 🎓 about how to create #DeepLearning based workflows for #BioimageAnalysis tasks 🛠️

In particular, students got their hands on the notebook 📓 for 2D semantic segmentation:

colab.research.google.com/github/BiaPy...
Google Colab
colab.research.google.com
September 19, 2025 at 9:58 AM