Gavin Simpson
@gsimpson.bsky.social
(Palaeo)[ecologist | limnologist] & #fakeStatistican, #rstats user, wielder of #GAMs. He/him/his. Opinions mine…
I have very fond memories of feeding the giraffe there; have fun enjoying Nairobi (taking breakfast at the national park at dawn, in one of the picnic / viewpoints on the high ground overlooking the rest of the park was a real treat, as was the elephant orphanage)
October 6, 2025 at 5:39 PM
I have very fond memories of feeding the giraffe there; have fun enjoying Nairobi (taking breakfast at the national park at dawn, in one of the picnic / viewpoints on the high ground overlooking the rest of the park was a real treat, as was the elephant orphanage)
If you want to check out the examples from the Physalia course, the materials from the last running are available on GitHub
github.com/gavinsimpson...
github.com/gavinsimpson...
GitHub - gavinsimpson/physalia-gam-course: Generalized Additive Models; a data-driven approach to estimating regression models
Generalized Additive Models; a data-driven approach to estimating regression models - gavinsimpson/physalia-gam-course
github.com
September 29, 2025 at 8:26 AM
If you want to check out the examples from the Physalia course, the materials from the last running are available on GitHub
github.com/gavinsimpson...
github.com/gavinsimpson...
I’d be happy to add/use a psych example or two if you have suggestions for papers or analyses where the data are open?
September 29, 2025 at 8:23 AM
I’d be happy to add/use a psych example or two if you have suggestions for papers or analyses where the data are open?
As I’m a geographer by PhD working in ecology, environmental science, and now animal science, the examples tend towards the natural and life sciences, but they are quite varied so attendees from a wide array of backgrounds usually find them relatable.
September 29, 2025 at 8:23 AM
As I’m a geographer by PhD working in ecology, environmental science, and now animal science, the examples tend towards the natural and life sciences, but they are quite varied so attendees from a wide array of backgrounds usually find them relatable.
I’ll be running a 3-day one at AU Viborg (about an hour from Aarhus, Denmark) June 9th through 11th that is in person. Dates are TBC but registration should be open in the next couple of weeks
I’m also running an online one with @physaliacourses.bsky.social in December this year.
I’m also running an online one with @physaliacourses.bsky.social in December this year.
September 27, 2025 at 8:01 AM
I’ll be running a 3-day one at AU Viborg (about an hour from Aarhus, Denmark) June 9th through 11th that is in person. Dates are TBC but registration should be open in the next couple of weeks
I’m also running an online one with @physaliacourses.bsky.social in December this year.
I’m also running an online one with @physaliacourses.bsky.social in December this year.
Congratulations Thomas; I know this release hasn’t been an easy one
September 11, 2025 at 2:36 PM
Congratulations Thomas; I know this release hasn’t been an easy one
It is also usually an example inappropriate calculation-first-estimation-second when we should be doing things the other way round; estimate model then calculate differences/ratios from the model, not the data
September 6, 2025 at 5:14 PM
It is also usually an example inappropriate calculation-first-estimation-second when we should be doing things the other way round; estimate model then calculate differences/ratios from the model, not the data
🛠️ partial_derivatives() improvements:
• handles multiple smooths better
• ignores random effect & univariate smooths
• clearer error messages
• handles multiple smooths better
• ignores random effect & univariate smooths
• clearer error messages
August 25, 2025 at 12:25 PM
🛠️ partial_derivatives() improvements:
• handles multiple smooths better
• ignores random effect & univariate smooths
• clearer error messages
• handles multiple smooths better
• ignores random effect & univariate smooths
• clearer error messages
📈 quantile_residuals() supports more mgcv 📦 families:
• scat()
• nb()
• betar()
• tw()
• scat()
• nb()
• betar()
• tw()
August 25, 2025 at 12:25 PM
📈 quantile_residuals() supports more mgcv 📦 families:
• scat()
• nb()
• betar()
• tw()
• scat()
• nb()
• betar()
• tw()
✨ Plots: residuals_hist_plot() (and appraise()) now align histogram bins more sensibly, centering at 0.
August 25, 2025 at 12:25 PM
✨ Plots: residuals_hist_plot() (and appraise()) now align histogram bins more sensibly, centering at 0.
You could try the gamlss2 package next time; it’s a lot quicker than gamlss (it’s a redevelopment of the original by same authors plus others). Only on GitHub at the moment
August 19, 2025 at 3:44 PM
You could try the gamlss2 package next time; it’s a lot quicker than gamlss (it’s a redevelopment of the original by same authors plus others). Only on GitHub at the moment