German BioImaging
@gerbi-gmb.de
Society of core facilities, scientists, students, institutions & companies for microscopy, imageanalysis & datamanagement.
🔬 https://gerbi-gmb.de/
🔬 https://gerbi-gmb.de/
OME-NGFF Hackathon in Zürich just started! We're organizing ourselves to dig into various topics during the next few days. Let's shape the future of microscopy image data standards together. #OME-NGFF_Hackathon #GerBI
November 12, 2025 at 10:27 AM
OME-NGFF Hackathon in Zürich just started! We're organizing ourselves to dig into various topics during the next few days. Let's shape the future of microscopy image data standards together. #OME-NGFF_Hackathon #GerBI
Reposted by German BioImaging
💬 We’re excited to announce, together with @gerbi-gmb.de, another Ask the Experts session! 🎉
Next week, on Nov 5 from 3–5 pm CET, we’ll discuss Spatial Transcriptomics with our invited experts: Jan-Philipp Mallm, Sheida Hadji Rasouliha and Marina Peralta!
If you are interested to join, reach out!
Next week, on Nov 5 from 3–5 pm CET, we’ll discuss Spatial Transcriptomics with our invited experts: Jan-Philipp Mallm, Sheida Hadji Rasouliha and Marina Peralta!
If you are interested to join, reach out!
October 29, 2025 at 12:41 PM
💬 We’re excited to announce, together with @gerbi-gmb.de, another Ask the Experts session! 🎉
Next week, on Nov 5 from 3–5 pm CET, we’ll discuss Spatial Transcriptomics with our invited experts: Jan-Philipp Mallm, Sheida Hadji Rasouliha and Marina Peralta!
If you are interested to join, reach out!
Next week, on Nov 5 from 3–5 pm CET, we’ll discuss Spatial Transcriptomics with our invited experts: Jan-Philipp Mallm, Sheida Hadji Rasouliha and Marina Peralta!
If you are interested to join, reach out!
Reposted by German BioImaging
Another #RDM4mic meeting, which focused on research data management for microscopy, took place
@uni-muenster.de. 💫
Several NFDI4BIOIMAGE task area leaders and data stewards met on site and contributed to the program.
Susanne Kunis' presentation is already available: doi.org/10.5281/zeno...
@uni-muenster.de. 💫
Several NFDI4BIOIMAGE task area leaders and data stewards met on site and contributed to the program.
Susanne Kunis' presentation is already available: doi.org/10.5281/zeno...
October 27, 2025 at 12:02 PM
Another #RDM4mic meeting, which focused on research data management for microscopy, took place
@uni-muenster.de. 💫
Several NFDI4BIOIMAGE task area leaders and data stewards met on site and contributed to the program.
Susanne Kunis' presentation is already available: doi.org/10.5281/zeno...
@uni-muenster.de. 💫
Several NFDI4BIOIMAGE task area leaders and data stewards met on site and contributed to the program.
Susanne Kunis' presentation is already available: doi.org/10.5281/zeno...
🔬 Join us in Leipzig!
The #YMIA panel discussion "The Power of Sharing: Open Data in Bio-image Analysis" is happening in person at UFZ Leipzig on Friday!
Organized by the Young Microscopists & Image Analysts (YMIA) Team, part of the GerBI community.
#BioImageAnalysis #Microscopy #OpenData
The #YMIA panel discussion "The Power of Sharing: Open Data in Bio-image Analysis" is happening in person at UFZ Leipzig on Friday!
Organized by the Young Microscopists & Image Analysts (YMIA) Team, part of the GerBI community.
#BioImageAnalysis #Microscopy #OpenData
October 22, 2025 at 7:27 AM
🔬 Join us in Leipzig!
The #YMIA panel discussion "The Power of Sharing: Open Data in Bio-image Analysis" is happening in person at UFZ Leipzig on Friday!
Organized by the Young Microscopists & Image Analysts (YMIA) Team, part of the GerBI community.
#BioImageAnalysis #Microscopy #OpenData
The #YMIA panel discussion "The Power of Sharing: Open Data in Bio-image Analysis" is happening in person at UFZ Leipzig on Friday!
Organized by the Young Microscopists & Image Analysts (YMIA) Team, part of the GerBI community.
#BioImageAnalysis #Microscopy #OpenData
Reposted by German BioImaging
🔬We are looking forward to the #RDM4mic meeting that will take place from October 21-23 at the University of Münster. It is co-organized by @nfdi4bioimage.bsky.social and @gerbi-gmb.de and aims to bring together members of the imaging and #RDM community.
Read more:
👉 hackmd.io/@marietoveli...
Read more:
👉 hackmd.io/@marietoveli...
October 14, 2025 at 8:40 AM
🔬We are looking forward to the #RDM4mic meeting that will take place from October 21-23 at the University of Münster. It is co-organized by @nfdi4bioimage.bsky.social and @gerbi-gmb.de and aims to bring together members of the imaging and #RDM community.
Read more:
👉 hackmd.io/@marietoveli...
Read more:
👉 hackmd.io/@marietoveli...
First day of our 5th Day of Intravital Microscopy conference has started!
Organised by our Team Intravital Microscopy and the working group of the @wsic.bsky.social and iFIT Cluster of Excellence.
Already had amazing talks and are looking forward to many more ✨
#IvMic2025
Organised by our Team Intravital Microscopy and the working group of the @wsic.bsky.social and iFIT Cluster of Excellence.
Already had amazing talks and are looking forward to many more ✨
#IvMic2025
September 18, 2025 at 2:59 PM
First day of our 5th Day of Intravital Microscopy conference has started!
Organised by our Team Intravital Microscopy and the working group of the @wsic.bsky.social and iFIT Cluster of Excellence.
Already had amazing talks and are looking forward to many more ✨
#IvMic2025
Organised by our Team Intravital Microscopy and the working group of the @wsic.bsky.social and iFIT Cluster of Excellence.
Already had amazing talks and are looking forward to many more ✨
#IvMic2025
Reposted by German BioImaging
🚀 Registration is open for BioHackathon Germany 2025! Join us 1–5 Dec in Walsrode for hands-on projects, networking, and innovation in #bioinformatics. 🧬🤝
🏨 Anders Hotel Walsrode | 🍽️ Social events | ✈️ Easy travel
🔗 Seats limited—register now! www.denbi.de/de-nbi-event...
#Hackathon
🏨 Anders Hotel Walsrode | 🍽️ Social events | ✈️ Easy travel
🔗 Seats limited—register now! www.denbi.de/de-nbi-event...
#Hackathon
September 3, 2025 at 8:55 AM
🚀 Registration is open for BioHackathon Germany 2025! Join us 1–5 Dec in Walsrode for hands-on projects, networking, and innovation in #bioinformatics. 🧬🤝
🏨 Anders Hotel Walsrode | 🍽️ Social events | ✈️ Easy travel
🔗 Seats limited—register now! www.denbi.de/de-nbi-event...
#Hackathon
🏨 Anders Hotel Walsrode | 🍽️ Social events | ✈️ Easy travel
🔗 Seats limited—register now! www.denbi.de/de-nbi-event...
#Hackathon
Reposted by German BioImaging
We're happy to announce the 2025 International OME-NGFF workshop 🎉
📅 Dates:
- Symposium: Nov 10–11, 2025
- Hackathon: Nov 12–14, 2025
📍 Location: Zurich, Switzerland
Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...
#bioimaging #openscience #OMENGFF #OMEZarr
(1/x 🧵)
📅 Dates:
- Symposium: Nov 10–11, 2025
- Hackathon: Nov 12–14, 2025
📍 Location: Zurich, Switzerland
Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...
#bioimaging #openscience #OMENGFF #OMEZarr
(1/x 🧵)
August 25, 2025 at 9:07 AM
We're happy to announce the 2025 International OME-NGFF workshop 🎉
📅 Dates:
- Symposium: Nov 10–11, 2025
- Hackathon: Nov 12–14, 2025
📍 Location: Zurich, Switzerland
Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...
#bioimaging #openscience #OMENGFF #OMEZarr
(1/x 🧵)
📅 Dates:
- Symposium: Nov 10–11, 2025
- Hackathon: Nov 12–14, 2025
📍 Location: Zurich, Switzerland
Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...
#bioimaging #openscience #OMENGFF #OMEZarr
(1/x 🧵)
Reposted by German BioImaging
📢 Deadline Extended!
We’re excited to announce that the registration deadline for in-person attendance at the #foundingGIDE Community Event has been extended.
🗓️ New deadline: 30 September 2025 (previously 31 August 2025)
We’re excited to announce that the registration deadline for in-person attendance at the #foundingGIDE Community Event has been extended.
🗓️ New deadline: 30 September 2025 (previously 31 August 2025)
The #foundingGIDE Community Event 2025 program is now live!
📌 Location: Brisbane, Australia & Online
📅 Deadline: 31st August
📃 Program: docs.google.com/document/d/1...
@globalbioimaging.bsky.social @nifaustralia.bsky.social @micro-au.bsky.social @eurobioimaging.bsky.social
#imaging #bioimaging
📌 Location: Brisbane, Australia & Online
📅 Deadline: 31st August
📃 Program: docs.google.com/document/d/1...
@globalbioimaging.bsky.social @nifaustralia.bsky.social @micro-au.bsky.social @eurobioimaging.bsky.social
#imaging #bioimaging
August 27, 2025 at 2:46 PM
📢 Deadline Extended!
We’re excited to announce that the registration deadline for in-person attendance at the #foundingGIDE Community Event has been extended.
🗓️ New deadline: 30 September 2025 (previously 31 August 2025)
We’re excited to announce that the registration deadline for in-person attendance at the #foundingGIDE Community Event has been extended.
🗓️ New deadline: 30 September 2025 (previously 31 August 2025)
⏰ Reminder: The early bird registration and abstract submission for our 5th Day of Intravital Microscopy close on September 5!
Don’t miss your chance to join us in Tübingen on 18–19 Sept. Secure your spot today!
👉 bit.ly/3IOlJtJ
Don’t miss your chance to join us in Tübingen on 18–19 Sept. Secure your spot today!
👉 bit.ly/3IOlJtJ
5th Day of Intravital Microscopy - German BioImaging
Intravital microscopy (IVM) enables the observation and precise quantification of cellular processes within native tissue microenvironments, with resolutions unmatched by other techniques. This powerf...
bit.ly
September 1, 2025 at 8:25 AM
⏰ Reminder: The early bird registration and abstract submission for our 5th Day of Intravital Microscopy close on September 5!
Don’t miss your chance to join us in Tübingen on 18–19 Sept. Secure your spot today!
👉 bit.ly/3IOlJtJ
Don’t miss your chance to join us in Tübingen on 18–19 Sept. Secure your spot today!
👉 bit.ly/3IOlJtJ
Check out the detailed program for the 5th Day of Intravital Microscopy (18–19 Sept, Tübingen)!
Our keynote: @matthiakarreman.bsky.social: "Imaging cancer networks in brain metastases in vivo."
Full details 👉 bit.ly/3IOlJtJ
#IVMIC25
Our keynote: @matthiakarreman.bsky.social: "Imaging cancer networks in brain metastases in vivo."
Full details 👉 bit.ly/3IOlJtJ
#IVMIC25
5th Day of Intravital Microscopy - German BioImaging
Intravital microscopy (IVM) enables the observation and precise quantification of cellular processes within native tissue microenvironments, with resolutions unmatched by other techniques. This powerf...
bit.ly
August 29, 2025 at 6:18 AM
Check out the detailed program for the 5th Day of Intravital Microscopy (18–19 Sept, Tübingen)!
Our keynote: @matthiakarreman.bsky.social: "Imaging cancer networks in brain metastases in vivo."
Full details 👉 bit.ly/3IOlJtJ
#IVMIC25
Our keynote: @matthiakarreman.bsky.social: "Imaging cancer networks in brain metastases in vivo."
Full details 👉 bit.ly/3IOlJtJ
#IVMIC25
Reposted by German BioImaging
#microscopycommunity- do you use BioFormats, OMERO, OME-TIFF, OME-Zarr or are you interested in open source and microscopy? Then you should check out the recordings from OME2025!
buff.ly/fgUxoQf
@openmicroscopy.org
@gerbi-gmb.de.
@jacksonlab.bsky.social
@mblscience.bsky.social
buff.ly/fgUxoQf
@openmicroscopy.org
@gerbi-gmb.de.
@jacksonlab.bsky.social
@mblscience.bsky.social
June 18, 2025 at 6:47 PM
#microscopycommunity- do you use BioFormats, OMERO, OME-TIFF, OME-Zarr or are you interested in open source and microscopy? Then you should check out the recordings from OME2025!
buff.ly/fgUxoQf
@openmicroscopy.org
@gerbi-gmb.de.
@jacksonlab.bsky.social
@mblscience.bsky.social
buff.ly/fgUxoQf
@openmicroscopy.org
@gerbi-gmb.de.
@jacksonlab.bsky.social
@mblscience.bsky.social
Today is already the last day of our #CoreFacility Leadership and #Management Course 2025 together with @hfpconsulting.bsky.social at Schloss Mickeln in Düsseldorf 🏰📚
August 15, 2025 at 9:01 AM
Today is already the last day of our #CoreFacility Leadership and #Management Course 2025 together with @hfpconsulting.bsky.social at Schloss Mickeln in Düsseldorf 🏰📚
Everything is set and ready for our #CoreFacility Leadership and Management Course together with @hfpconsulting.bsky.social at Schloss Mickeln in Düsseldorf 🏰We are excited to get started!
If you are interested in the course check out: bit.ly/45LOPTy
#LeadershipInScience #CFLM #microscopy
If you are interested in the course check out: bit.ly/45LOPTy
#LeadershipInScience #CFLM #microscopy
August 11, 2025 at 3:53 PM
Everything is set and ready for our #CoreFacility Leadership and Management Course together with @hfpconsulting.bsky.social at Schloss Mickeln in Düsseldorf 🏰We are excited to get started!
If you are interested in the course check out: bit.ly/45LOPTy
#LeadershipInScience #CFLM #microscopy
If you are interested in the course check out: bit.ly/45LOPTy
#LeadershipInScience #CFLM #microscopy
🔬 Join us for the 5th Day of Intravital Microscopy!
📅 September 18–19, 2025 | 📍 Tübingen, Germany
Talks, discussions & networking around all things intravital imaging!
📝 Abstract submission deadline is fast approaching:
Submit by July 30, 2025
Register & submit here:
🔗 bit.ly/44RTzFK
#IvMic2025
📅 September 18–19, 2025 | 📍 Tübingen, Germany
Talks, discussions & networking around all things intravital imaging!
📝 Abstract submission deadline is fast approaching:
Submit by July 30, 2025
Register & submit here:
🔗 bit.ly/44RTzFK
#IvMic2025
July 21, 2025 at 10:35 AM
🔬 Join us for the 5th Day of Intravital Microscopy!
📅 September 18–19, 2025 | 📍 Tübingen, Germany
Talks, discussions & networking around all things intravital imaging!
📝 Abstract submission deadline is fast approaching:
Submit by July 30, 2025
Register & submit here:
🔗 bit.ly/44RTzFK
#IvMic2025
📅 September 18–19, 2025 | 📍 Tübingen, Germany
Talks, discussions & networking around all things intravital imaging!
📝 Abstract submission deadline is fast approaching:
Submit by July 30, 2025
Register & submit here:
🔗 bit.ly/44RTzFK
#IvMic2025
So happy to have you on board! Welcome to the team! 🙌
As good as a time as any to announce: After a great time at @poldresden.bsky.social I'm looking forward to starting my new position at @gerbi-gmb.de as a software developer for @openmicroscopy.org 🔬😀!
Scalable #RDM solutions in the ome-zarr-verse, here we come!
Scalable #RDM solutions in the ome-zarr-verse, here we come!
July 21, 2025 at 8:33 AM
So happy to have you on board! Welcome to the team! 🙌
Over the past few weeks, we've been actively highlighting our projects focused on FAIR image data management and OME-Zarr. Here is a collection, we've collected the related links to the webinars on our news page for you to (re)watch anytime! 🎥🔬: bit.ly/4nHu1DL
#FAIRdata#OMEZarr#Bioimaging
#FAIRdata#OMEZarr#Bioimaging
Recent Webinars Showcasing Our FAIR Image Data Projects - German BioImaging
Website of German BioImaging - Gesellschaft für Mikroskopie und Bildanalyse. Contains also the webpages of I3D:bio, information infrastructure for BioImage Data
bit.ly
July 15, 2025 at 11:13 AM
Over the past few weeks, we've been actively highlighting our projects focused on FAIR image data management and OME-Zarr. Here is a collection, we've collected the related links to the webinars on our news page for you to (re)watch anytime! 🎥🔬: bit.ly/4nHu1DL
#FAIRdata#OMEZarr#Bioimaging
#FAIRdata#OMEZarr#Bioimaging
Reposted by German BioImaging
#TiM2023 and #TiM2025 data is now publicly available!
Find the data collected and annotated at the Trends in Microscopy conference in an OMERO-based framework introduced by I3D:bio '23 and extended in '25, supported by the @nfdi4bioimage.bsky.social data stewards.
👉 nfdi4bioimage.de/news/news-de...
Find the data collected and annotated at the Trends in Microscopy conference in an OMERO-based framework introduced by I3D:bio '23 and extended in '25, supported by the @nfdi4bioimage.bsky.social data stewards.
👉 nfdi4bioimage.de/news/news-de...
June 26, 2025 at 7:53 AM
#TiM2023 and #TiM2025 data is now publicly available!
Find the data collected and annotated at the Trends in Microscopy conference in an OMERO-based framework introduced by I3D:bio '23 and extended in '25, supported by the @nfdi4bioimage.bsky.social data stewards.
👉 nfdi4bioimage.de/news/news-de...
Find the data collected and annotated at the Trends in Microscopy conference in an OMERO-based framework introduced by I3D:bio '23 and extended in '25, supported by the @nfdi4bioimage.bsky.social data stewards.
👉 nfdi4bioimage.de/news/news-de...
🔬 YMIA is at the Helmholtz Imaging Conference 2025!
Elena from the core team presents a poster about the YMIA community — who we are, what we do, and how we connect early-career researchers in imaging and analysis.
She’s here to exchange ideas and meet you. Come say hi!
#HIConference2025 #BSIC2025
Elena from the core team presents a poster about the YMIA community — who we are, what we do, and how we connect early-career researchers in imaging and analysis.
She’s here to exchange ideas and meet you. Come say hi!
#HIConference2025 #BSIC2025
June 25, 2025 at 3:43 PM
🔬 YMIA is at the Helmholtz Imaging Conference 2025!
Elena from the core team presents a poster about the YMIA community — who we are, what we do, and how we connect early-career researchers in imaging and analysis.
She’s here to exchange ideas and meet you. Come say hi!
#HIConference2025 #BSIC2025
Elena from the core team presents a poster about the YMIA community — who we are, what we do, and how we connect early-career researchers in imaging and analysis.
She’s here to exchange ideas and meet you. Come say hi!
#HIConference2025 #BSIC2025
💬 Our #GerBIchat is about to start!
Join us and drop by to discuss large equipment proposals with our GerBI Legal & Financial Framework Team.
Join us and drop by to discuss large equipment proposals with our GerBI Legal & Financial Framework Team.
💬 Join us for the next #GerBIchat on
Successful large equipment proposals: from approval to final report
with insights from procurement & finance experts and the #GerBI Legal & Financial Framework team.
🗓️ 25.06.2025 | ⏰ 1–3 pm CEST | 💬 Held in German
🔗 More info here: bit.ly/43HG5gl
Successful large equipment proposals: from approval to final report
with insights from procurement & finance experts and the #GerBI Legal & Financial Framework team.
🗓️ 25.06.2025 | ⏰ 1–3 pm CEST | 💬 Held in German
🔗 More info here: bit.ly/43HG5gl
June 25, 2025 at 10:43 AM
💬 Our #GerBIchat is about to start!
Join us and drop by to discuss large equipment proposals with our GerBI Legal & Financial Framework Team.
Join us and drop by to discuss large equipment proposals with our GerBI Legal & Financial Framework Team.
Core facility contributions are essential, and #ImagingScientists deserve to receive #CreditWhereItsDue. That’s why we fully support the #AcknowledgementGuidelines launched by @royalmicrosoc.bsky.social and @globalbioimaging.bsky.social and have proudly displayed them in our digital office.
June 23, 2025 at 1:52 PM
Core facility contributions are essential, and #ImagingScientists deserve to receive #CreditWhereItsDue. That’s why we fully support the #AcknowledgementGuidelines launched by @royalmicrosoc.bsky.social and @globalbioimaging.bsky.social and have proudly displayed them in our digital office.
⌛ Only one week left!
The application deadline for our open positions as Remote Web Developer, Remote Software Developer and Project Coordinator is just 7 days away.
Don't miss your chance to apply!
Check out all job openings on our careers page⬇️
The application deadline for our open positions as Remote Web Developer, Remote Software Developer and Project Coordinator is just 7 days away.
Don't miss your chance to apply!
Check out all job openings on our careers page⬇️
🚨 We’re hiring TWO new colleagues!
🧠 Structured Metadata Expert – Design data models, standards & annotations for #OMEZarr
🌐 Web Developer / Prototyper – Build interactive tools & demos for the community
Both fully remote. Both open science.
🔗 gerbi-gmb.de/resources/ca... #RSE #OpenScience
🧠 Structured Metadata Expert – Design data models, standards & annotations for #OMEZarr
🌐 Web Developer / Prototyper – Build interactive tools & demos for the community
Both fully remote. Both open science.
🔗 gerbi-gmb.de/resources/ca... #RSE #OpenScience
Career - German BioImaging
Job offers
Feel free to contact us, if you want to publish your job offer here. Project Coordinator (m/f/d, 50-100%, fully remote) at GerBI-GMB e.V.
June 2025
We are looking
gerbi-gmb.de
June 23, 2025 at 11:03 AM
⌛ Only one week left!
The application deadline for our open positions as Remote Web Developer, Remote Software Developer and Project Coordinator is just 7 days away.
Don't miss your chance to apply!
Check out all job openings on our careers page⬇️
The application deadline for our open positions as Remote Web Developer, Remote Software Developer and Project Coordinator is just 7 days away.
Don't miss your chance to apply!
Check out all job openings on our careers page⬇️
🧠 Metadata and Standards Lead
🛠️ Job Alert: Metadata and Standards Lead (up to 100%, fully remote, based in EU)
We’re looking for a thoughtful and technically skilled expert to help us shape the future of metadata in bioimaging.
🛠️ Job Alert: Metadata and Standards Lead (up to 100%, fully remote, based in EU)
We’re looking for a thoughtful and technically skilled expert to help us shape the future of metadata in bioimaging.
June 16, 2025 at 11:10 AM
🧠 Metadata and Standards Lead
🛠️ Job Alert: Metadata and Standards Lead (up to 100%, fully remote, based in EU)
We’re looking for a thoughtful and technically skilled expert to help us shape the future of metadata in bioimaging.
🛠️ Job Alert: Metadata and Standards Lead (up to 100%, fully remote, based in EU)
We’re looking for a thoughtful and technically skilled expert to help us shape the future of metadata in bioimaging.
🌐 Junior Web Developer / Scientific Prototyper
🛠️ Job Alert: Web Developer / Scientific Prototyper (up to 100%, fully remote, based in EU)
We’re looking for a creative web developer to build engaging tools and interactive demos for the imaging community.
🛠️ Job Alert: Web Developer / Scientific Prototyper (up to 100%, fully remote, based in EU)
We’re looking for a creative web developer to build engaging tools and interactive demos for the imaging community.
June 16, 2025 at 11:10 AM
🌐 Junior Web Developer / Scientific Prototyper
🛠️ Job Alert: Web Developer / Scientific Prototyper (up to 100%, fully remote, based in EU)
We’re looking for a creative web developer to build engaging tools and interactive demos for the imaging community.
🛠️ Job Alert: Web Developer / Scientific Prototyper (up to 100%, fully remote, based in EU)
We’re looking for a creative web developer to build engaging tools and interactive demos for the imaging community.
"What #FAIR #RDM tools are available to you in your laboratory or facility?"
State of the #bioimaging #community captured during #ELMI2025 Core Facility Day
State of the #bioimaging #community captured during #ELMI2025 Core Facility Day
June 10, 2025 at 1:42 PM
"What #FAIR #RDM tools are available to you in your laboratory or facility?"
State of the #bioimaging #community captured during #ELMI2025 Core Facility Day
State of the #bioimaging #community captured during #ELMI2025 Core Facility Day