Fabrice Not
@fabnot.bsky.social
Senior Scientist @ Station biologique de Roscoff, France #cnrs #sorbonneuniversity
#eDNA #radiolaria #microbiomes #symbiosis #protists
#eDNA #radiolaria #microbiomes #symbiosis #protists
Reposted by Fabrice Not
Researchers present the BaNaNA (Barcoding Nanopore Neat Annotator) pipeline and display the effectiveness of long-read Nanopore sequencing for protist biodiversity, ecology and evolution research.
🔗 doi.org/10.3897/mbmg...
@ankarn.bsky.social @fabnot.bsky.social
🔗 doi.org/10.3897/mbmg...
@ankarn.bsky.social @fabnot.bsky.social
From short to long reads: enhanced protist diversity profiling via Nanopore metabarcoding
In the last decades, environmental metabarcoding has revolutionised biodiversity research, particularly for microbial organisms such as protists, enabling large-scale assessments of diversity and ecol...
doi.org
October 8, 2025 at 1:27 PM
Researchers present the BaNaNA (Barcoding Nanopore Neat Annotator) pipeline and display the effectiveness of long-read Nanopore sequencing for protist biodiversity, ecology and evolution research.
🔗 doi.org/10.3897/mbmg...
@ankarn.bsky.social @fabnot.bsky.social
🔗 doi.org/10.3897/mbmg...
@ankarn.bsky.social @fabnot.bsky.social
Thank you so much to the amazing LoRe crew for giving me this wonderful opportunity ! It’s been a great time spent chatting together and an honor to get this series of podcasts started 🤩🙏. #protistonsky
My friends in the Life of Retaria group decided to make a podcast! In the first episode, they interview @fabnot.bsky.social about his journey as a scientist. I loved the first episode, hope you do too! @juliemeilland.bsky.social @sandinmm.bsky.social et al.
thelifeofretaria.github.io/podcast.html
thelifeofretaria.github.io/podcast.html
The Life of Retaria Experience
thelifeofretaria.github.io
May 12, 2025 at 6:25 PM
Thank you so much to the amazing LoRe crew for giving me this wonderful opportunity ! It’s been a great time spent chatting together and an honor to get this series of podcasts started 🤩🙏. #protistonsky
Reposted by Fabrice Not
Despite 150+ years of Radiolaria diversity research, we have just scratched the surface. Nearly half of Radiolaria diversity might be naked hiding in plain sight! We unveiled the diversity and evolution of Radiolaria beyond "the stars of the ocean"
doi.org/10.1016/j.cu...
doi.org/10.1016/j.cu...
May 8, 2025 at 1:38 PM
Despite 150+ years of Radiolaria diversity research, we have just scratched the surface. Nearly half of Radiolaria diversity might be naked hiding in plain sight! We unveiled the diversity and evolution of Radiolaria beyond "the stars of the ocean"
doi.org/10.1016/j.cu...
doi.org/10.1016/j.cu...
Reposted by Fabrice Not
Reposted by Fabrice Not
Why do some planktonic protists develop a gelatinous matrix? We suggest that this original adaptation is a strategy to cope with ocean oligotrophy: doi.org/10.1111/1462...
Led by @n-llopis-m.bsky.social, and thanks to all co-authors, I'm very happy to finally see it out!
#protistsonsky
Led by @n-llopis-m.bsky.social, and thanks to all co-authors, I'm very happy to finally see it out!
#protistsonsky
May 5, 2025 at 4:24 PM
Why do some planktonic protists develop a gelatinous matrix? We suggest that this original adaptation is a strategy to cope with ocean oligotrophy: doi.org/10.1111/1462...
Led by @n-llopis-m.bsky.social, and thanks to all co-authors, I'm very happy to finally see it out!
#protistsonsky
Led by @n-llopis-m.bsky.social, and thanks to all co-authors, I'm very happy to finally see it out!
#protistsonsky
Reposted by Fabrice Not
🌊 Save the Date! 🌍
#SAME18 — Aquatic Microbiomes on a Changing Planet
📍 Barcelona, Spain | 🗓️ Sept 28 – Oct 3, 2025
At the iconic PRBB 🧬🌿
Join us to explore the frontiers of aquatic microbial ecology.
📢 Stay tuned for more info and follow us on Bluesky!
#MicrobialEcology #MarineMicrobiology #SAME18
#SAME18 — Aquatic Microbiomes on a Changing Planet
📍 Barcelona, Spain | 🗓️ Sept 28 – Oct 3, 2025
At the iconic PRBB 🧬🌿
Join us to explore the frontiers of aquatic microbial ecology.
📢 Stay tuned for more info and follow us on Bluesky!
#MicrobialEcology #MarineMicrobiology #SAME18
March 22, 2025 at 12:47 PM
🌊 Save the Date! 🌍
#SAME18 — Aquatic Microbiomes on a Changing Planet
📍 Barcelona, Spain | 🗓️ Sept 28 – Oct 3, 2025
At the iconic PRBB 🧬🌿
Join us to explore the frontiers of aquatic microbial ecology.
📢 Stay tuned for more info and follow us on Bluesky!
#MicrobialEcology #MarineMicrobiology #SAME18
#SAME18 — Aquatic Microbiomes on a Changing Planet
📍 Barcelona, Spain | 🗓️ Sept 28 – Oct 3, 2025
At the iconic PRBB 🧬🌿
Join us to explore the frontiers of aquatic microbial ecology.
📢 Stay tuned for more info and follow us on Bluesky!
#MicrobialEcology #MarineMicrobiology #SAME18
Reposted by Fabrice Not
Stoked about this manuscript, many years in the making. We present an original resource of ~700 highly curated plastid MAGs of marine pelagic algae. Among these we found a novel deep branching group of plastid genomes; we informally call them leptophytes
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
January 19, 2025 at 8:32 AM
Stoked about this manuscript, many years in the making. We present an original resource of ~700 highly curated plastid MAGs of marine pelagic algae. Among these we found a novel deep branching group of plastid genomes; we informally call them leptophytes
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Fabrice Not
La Station Biologique de Roscoff vous souhaite une très belle année 2025 !
Pour cette Année de la Mer, la préservation, la recherche et le partage des connaissances sur l'Océan seront au coeur de nos engagements.
Pour cette Année de la Mer, la préservation, la recherche et le partage des connaissances sur l'Océan seront au coeur de nos engagements.
January 10, 2025 at 10:18 AM
La Station Biologique de Roscoff vous souhaite une très belle année 2025 !
Pour cette Année de la Mer, la préservation, la recherche et le partage des connaissances sur l'Océan seront au coeur de nos engagements.
Pour cette Année de la Mer, la préservation, la recherche et le partage des connaissances sur l'Océan seront au coeur de nos engagements.
Reposted by Fabrice Not
Next Monday 13 we have the 6th session of The Life of Retaria Seminar Series!
Join us at 08h00 (CET) and discover symbiosis in these wonderful protists with Caroline Juery and @filiphusnik.bsky.social
Check it out: thelifeofretaria.github.io
#radiolaria #foraminifera #theLifeOfRetaria #protistsonsky
Join us at 08h00 (CET) and discover symbiosis in these wonderful protists with Caroline Juery and @filiphusnik.bsky.social
Check it out: thelifeofretaria.github.io
#radiolaria #foraminifera #theLifeOfRetaria #protistsonsky
January 10, 2025 at 5:01 PM
Next Monday 13 we have the 6th session of The Life of Retaria Seminar Series!
Join us at 08h00 (CET) and discover symbiosis in these wonderful protists with Caroline Juery and @filiphusnik.bsky.social
Check it out: thelifeofretaria.github.io
#radiolaria #foraminifera #theLifeOfRetaria #protistsonsky
Join us at 08h00 (CET) and discover symbiosis in these wonderful protists with Caroline Juery and @filiphusnik.bsky.social
Check it out: thelifeofretaria.github.io
#radiolaria #foraminifera #theLifeOfRetaria #protistsonsky
Reposted by Fabrice Not
🚨 Job alert!
There is still some time! Join the Seaphony team working on marine soundscapes to study key habitats within the European TREC and Biocean5D projects.
Job application here: luciadiiorio.site/wp-content/u...
#postdoc #acoustics
November 22, 2024 at 9:37 PM
🚨 Job alert!
There is still some time! Join the Seaphony team working on marine soundscapes to study key habitats within the European TREC and Biocean5D projects.
Job application here: luciadiiorio.site/wp-content/u...
#postdoc #acoustics
Reposted by Fabrice Not
Do you like aquatic microbes and computational work? Join my team as a Postdoctoral Researcher!
Apply here: hofstra.peopleadmin.com/postings/4504
Apply here: hofstra.peopleadmin.com/postings/4504
November 1, 2024 at 3:08 PM
Do you like aquatic microbes and computational work? Join my team as a Postdoctoral Researcher!
Apply here: hofstra.peopleadmin.com/postings/4504
Apply here: hofstra.peopleadmin.com/postings/4504
Reposted by Fabrice Not
