Andrew Wood
@drarwood.bsky.social
Statistical genetics, bioinformatics, data science. Originally comp. sci. Working on complex data. Army of 4. Guitars.
3/3. Thanks to Xihao Li, Zilin Li, Xihong Lin and others for the great collaboration.
January 29, 2025 at 5:22 AM
3/3. Thanks to Xihao Li, Zilin Li, Xihong Lin and others for the great collaboration.
2/3. We describe the vcf2agds toolkit - a streamlined and reproducible toolkit for processing the WGS data in UK Biobank from VCF to aGDS files for use with the STAAR pipeline that includes a x1336 reduction in total file size. Some of the tools can be used for general processing of the data also.
January 29, 2025 at 5:19 AM
2/3. We describe the vcf2agds toolkit - a streamlined and reproducible toolkit for processing the WGS data in UK Biobank from VCF to aGDS files for use with the STAAR pipeline that includes a x1336 reduction in total file size. Some of the tools can be used for general processing of the data also.