Diego Diez
Diego Diez
@diego10ruiz.bsky.social
Computational biologist working on immunology.

ORCID: 0000-0002-2325-4893
At this point, I see UMAPs everywhere.
July 20, 2025 at 8:37 AM
Reposted by Diego Diez
DeepSpaceDB: a spatial transcriptomics atlas for interactive in-depth analysis of tissues and tissue microenvironments https://www.biorxiv.org/content/10.1101/2025.01.05.631419v1
January 6, 2025 at 7:47 PM
Reposted by Diego Diez
My replies are perpetually full of anti-vaxxers these days telling me about polio vaccines.

Not shockingly, most of what they are saying is wrong. Luckily, I trained with Vincent Racaniello & he taught me a few things about poliovirus.

So let’s discuss the king of the Picornaviridae👇🏻
December 18, 2024 at 1:07 PM
Reposted by Diego Diez
Your regular reminder that you can cite unrefereed editorials, reviews, data, news, websites, books, even tweets. Citing preprints isn’t doing anything controversial 1/2
December 14, 2024 at 1:58 PM
Reposted by Diego Diez
anndata 0.11 is out now: anndata.readthedocs.io/en/stable/re...! We have some great new features to highlight as well as some breaking changes to look out for.
Release notes
Version 0.11: 0.11.1 2024-11-12: Bug fixes: Remove upper pin on dask and exclude versions broken with sparse indexing@ilan-gold(#1725), Fix chunking with -1 in chunks argument of read_elem_as_dask(...
anndata.readthedocs.io
November 18, 2024 at 12:37 PM
Reposted by Diego Diez
I would love to tell you about the times vaccines prevented me from getting sick, but every time it happens, I don’t notice. I just keep feeling well.

Neither do you.

Public health, when it’s working, is invisible.
November 15, 2024 at 11:20 AM
Reposted by Diego Diez
A thread with some new starter packs in genomics and bioinformatics 🧵 1/13...
November 15, 2024 at 9:56 AM
Reposted by Diego Diez
Bioconductor 3.20 is released! 🎉🌟
Thanks to all developers and community members for contributing to the project! 🙌
👉 See the full release announcement: bioconductor.org/news/bioc_3_...

#Bioconductor #DataScience #Bioinformatics #OpenSource
Bioconductor - Bioconductor 3.20 Released
The Bioconductor project aims to develop and share open source software for precise and repeatable analysis of biological data. We foster an inclusive and collaborative community of developers and dat...
bioconductor.org
October 30, 2024 at 10:04 PM