Darío San Segundo Molina
@dario-ssm.bsky.social
PhD Candidate at Universidad de Alcalá.
Focused on thermal ecology of major crop pests.
Focused on thermal ecology of major crop pests.
Same fort me Paco, It's also been a pleasure for me :) Thanks a lot for your effort!
November 20, 2025 at 7:32 PM
Same fort me Paco, It's also been a pleasure for me :) Thanks a lot for your effort!
gracias :))
November 20, 2025 at 6:29 PM
gracias :))
Gracias Julen :)
November 20, 2025 at 5:51 PM
Gracias Julen :)
If you have any question or if you want to contribute and/or report possible bugs, please open an issue in the repo (github.com/EcologyR/map...). Thanks! :)
github.com/EcologyR/map...
github.com/EcologyR/map...
github.com
November 20, 2025 at 4:34 PM
If you have any question or if you want to contribute and/or report possible bugs, please open an issue in the repo (github.com/EcologyR/map...). Thanks! :)
github.com/EcologyR/map...
github.com/EcologyR/map...
This workshop has been one of the best moments in these PhD years, as it was celebrated in an inspiring place near Grazalema, in Southern Spain
November 20, 2025 at 4:34 PM
This workshop has been one of the best moments in these PhD years, as it was celebrated in an inspiring place near Grazalema, in Southern Spain
mappestRisk has been possible thanks to the Workshop on R packages for ecology (ecologyr.github.io/workshop/), a great initiative by
@frodsan.bsky.social
). The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
@frodsan.bsky.social
). The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
November 20, 2025 at 4:34 PM
mappestRisk has been possible thanks to the Workshop on R packages for ecology (ecologyr.github.io/workshop/), a great initiative by
@frodsan.bsky.social
). The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
@frodsan.bsky.social
). The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
We also thanks authors of recent open-source software products, and particularly to
@padpadpadpad.bsky.social and @franwin.co.uk for the development of `rTPC` R package.
github.com/padpadpadpad...
@padpadpadpad.bsky.social and @franwin.co.uk for the development of `rTPC` R package.
github.com/padpadpadpad...
padpadpadpad/rTPC
R package to help fit Thermal Performance Curves. Contribute to padpadpadpad/rTPC development by creating an account on GitHub.
github.com
November 20, 2025 at 4:34 PM
We also thanks authors of recent open-source software products, and particularly to
@padpadpadpad.bsky.social and @franwin.co.uk for the development of `rTPC` R package.
github.com/padpadpadpad...
@padpadpadpad.bsky.social and @franwin.co.uk for the development of `rTPC` R package.
github.com/padpadpadpad...
This package has been developed by the collaboration of
@frodsan.bsky.social
@ambarbosa.bsky.social @ajpelu.bsky.social , and myself (@dario-ssm.bsky.social)
github.com/EcologyR/map...
@frodsan.bsky.social
@ambarbosa.bsky.social @ajpelu.bsky.social , and myself (@dario-ssm.bsky.social)
github.com/EcologyR/map...
GitHub - EcologyR/mappestRisk
Contribute to EcologyR/mappestRisk development by creating an account on GitHub.
github.com
November 20, 2025 at 4:34 PM
This package has been developed by the collaboration of
@frodsan.bsky.social
@ambarbosa.bsky.social @ajpelu.bsky.social , and myself (@dario-ssm.bsky.social)
github.com/EcologyR/map...
@frodsan.bsky.social
@ambarbosa.bsky.social @ajpelu.bsky.social , and myself (@dario-ssm.bsky.social)
github.com/EcologyR/map...
You can install the package directly from CRAN by running in R `install.packages("mappestRisk")` or from its GitHub development version using `remotes::install_github("EcologyR/mappestRisk")`
cran.r-project.org/web/packages...
cran.r-project.org/web/packages...
mappestRisk: Create Maps Forecasting Risk of Pest Occurrence
There are three different modules: (1) model fitting and selection using a set of the most commonly used equations describing developmental responses to temperature helped by already existing R packag...
cran.r-project.org
November 20, 2025 at 4:34 PM
You can install the package directly from CRAN by running in R `install.packages("mappestRisk")` or from its GitHub development version using `remotes::install_github("EcologyR/mappestRisk")`
cran.r-project.org/web/packages...
cran.r-project.org/web/packages...
4. The function map_risk() automatically downloads climatic data from WorldClim (worldclim.org/data/worldcl...) for the user-defined target region and calculate how many months per year would have optimal temperatures for pest development. The output is a raster map with the potential pest risk.
November 20, 2025 at 4:34 PM
4. The function map_risk() automatically downloads climatic data from WorldClim (worldclim.org/data/worldcl...) for the user-defined target region and calculate how many months per year would have optimal temperatures for pest development. The output is a raster map with the potential pest risk.
4. Calculate the range of temperatures that result optimal for pest development with therm_suit_bounds().
November 20, 2025 at 4:34 PM
4. Calculate the range of temperatures that result optimal for pest development with therm_suit_bounds().
3. Simulate multiple curves with bootstrap to propagate uncertainty in the parameters of the fitted TPCs and draw ribbons with predict_curves() and plot_uncertainties()
November 20, 2025 at 4:34 PM
3. Simulate multiple curves with bootstrap to propagate uncertainty in the parameters of the fitted TPCs and draw ribbons with predict_curves() and plot_uncertainties()
2. Visualize and compare fitted curves easily with plot_devmodels().
November 20, 2025 at 4:34 PM
2. Visualize and compare fitted curves easily with plot_devmodels().
We suggest following this workflow:
1. Fit thermal performance curves (TPCs) with multiple nonlinear models using fit_devmodels() (For now, 16 TPC model equations; we'll include soon new equations available in the development version of `rTPC` package
1. Fit thermal performance curves (TPCs) with multiple nonlinear models using fit_devmodels() (For now, 16 TPC model equations; we'll include soon new equations available in the development version of `rTPC` package
November 20, 2025 at 4:34 PM
We suggest following this workflow:
1. Fit thermal performance curves (TPCs) with multiple nonlinear models using fit_devmodels() (For now, 16 TPC model equations; we'll include soon new equations available in the development version of `rTPC` package
1. Fit thermal performance curves (TPCs) with multiple nonlinear models using fit_devmodels() (For now, 16 TPC model equations; we'll include soon new equations available in the development version of `rTPC` package
Take a look at the website here:
ecologyr.github.io/mappestRisk/
ecologyr.github.io/mappestRisk/
Create Maps Forecasting Risk of Pest Occurrence
There are three different modules: (1) model fitting and selection using a set of the most commonly used equations describing developmental responses to temperature helped by already existing R packag...
ecologyr.github.io
November 20, 2025 at 4:34 PM
Take a look at the website here:
ecologyr.github.io/mappestRisk/
ecologyr.github.io/mappestRisk/
We hope that this package contributes to facilitate ecological forecasts on pest risk for the scientific community and R users.
If you have any question or if you want to contribute and/or report possible bugs, please open an issue in the repo (github.com/EcologyR/map...).
Thanks! :)
If you have any question or if you want to contribute and/or report possible bugs, please open an issue in the repo (github.com/EcologyR/map...).
Thanks! :)
EcologyR/mappestRisk
Contribute to EcologyR/mappestRisk development by creating an account on GitHub.
github.com
November 20, 2025 at 1:50 PM
We hope that this package contributes to facilitate ecological forecasts on pest risk for the scientific community and R users.
If you have any question or if you want to contribute and/or report possible bugs, please open an issue in the repo (github.com/EcologyR/map...).
Thanks! :)
If you have any question or if you want to contribute and/or report possible bugs, please open an issue in the repo (github.com/EcologyR/map...).
Thanks! :)
which was celebrated in an inspiring place near Grazalema, in Southern Spain.
November 20, 2025 at 1:50 PM
which was celebrated in an inspiring place near Grazalema, in Southern Spain.
…and would not have been possible without the R packages for ecology workshop (ecologyr.github.io/workshop/), a great initiative by @frodsan.bsky.social).
The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
November 20, 2025 at 1:50 PM
…and would not have been possible without the R packages for ecology workshop (ecologyr.github.io/workshop/), a great initiative by @frodsan.bsky.social).
The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
The R packages BlueCarbon (github.com/EcologyR/Blu...) and labeler (github.com/EcologyR/lab...) are also results of this workshop.
We also thanks authors of recent open-source software products, and particularly to @padpadpadpad.bsky.social and all the contributors to `rTPC` and `nls.multstart` R packages.
November 20, 2025 at 1:50 PM
We also thanks authors of recent open-source software products, and particularly to @padpadpadpad.bsky.social and all the contributors to `rTPC` and `nls.multstart` R packages.
This package has been developed by the collaboration of @frodsan.bsky.social an.bsky.social, @ambarbosa.bsky.social osa.bsky.social, u.bsky.social and myself (@dario-ssm.bsky.social).
November 20, 2025 at 1:50 PM
This package has been developed by the collaboration of @frodsan.bsky.social an.bsky.social, @ambarbosa.bsky.social osa.bsky.social, u.bsky.social and myself (@dario-ssm.bsky.social).