Crick Image Analysis Team
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crick-ia-team.bsky.social
Crick Image Analysis Team
@crick-ia-team.bsky.social
We are the Image Analysis Team at the Francis Crick Institute in London. We support researchers with image analysis workflows and offer technical training both internally and to the wider community.
No CBIAS would be complete without an image analysis workshop! Thanks Rocco, @giuliapaci.bsky.social and @makaefer.bsky.social for organising, we had fun helping out with teaching 🔬💻
And that’s a wrap for the @cbias.bsky.social napari workshop as well. Two days of learning, working collaboratively and finished off with a presentation from each of five project groups detailing the progress they made. Organised by Rocco D’Antuono, @giuliapaci.bsky.social and yours truly
November 28, 2025 at 7:45 AM
We wrapped up yesterday the 6th edition of the Crick BioImage Analysis Symposium (CBIAS) - look at all those (bio)image analysts!
BIOIMAGE ANALYSTS ASSEMBLE!!!

#CBIAS2025
November 26, 2025 at 10:14 AM
Our team is busy organising #CBIAS2025 today and tomorrow! Follow the symposium hashtag to hear more about all the interesting discussions happening around all things bioimage analysis
November 24, 2025 at 11:34 AM
Reposted by Crick Image Analysis Team
UK Bioimaging @bioimaginguk.bsky.social launches User Access Fund for Researchers
Researchers can apply for up to £5k for access to bioimaging facilities at @calm-stp.bsky.social, @esric-imaging.bsky.social, KCL, Liverpool, Oxford Brookes & York.

First round deadline: 9 December 2025
UK Bioimaging Launches User Access Fund for Researchers - FocalPlane
UK Bioimaging Launches User Access Fund for Researchers - News
focalplane.biologists.com
November 17, 2025 at 10:25 AM
Full house for our monthly Image Analysis Club!

We discussed image data management and next generation file formats for image data with presentations from Ken Ho from the @crick.ac.uk and @dstansby.bsky.social from UCL
November 17, 2025 at 12:03 PM
Sara from our team has been busy in the last 3 days organising the 8th Crick Data Challenge, a friendly hackathon where attendees tackle research data testing their creativity and coding skills in new ways - congratulations on running a great event! 💻✨

crickdatachallenge.github.io/website/
November 14, 2025 at 2:22 PM
Reposted by Crick Image Analysis Team
Just 4 days until the start of I2K and its 33 totally free image analysis tutorials and events! Please share with your "home networks", especially early career researchers - the videos will be amazing and high-impact no matter how many people attend live, BUT (1/x)
November 13, 2025 at 2:32 PM
Another week, another training course!

We focused on #Python today, with our internal introductory workshop to image analysis.

Well-done to all attendees! 💻🔬and thanks to the “Bioinformatics and Biostatistics” and “Software Engineering and AI” teams for helping us deliver the course 🙏
November 7, 2025 at 6:06 PM
Reposted by Crick Image Analysis Team
📢 Enhance your bioimage analysis skills - 2-day hands-on napari workshop.

Learn to:
- Set up conda envis install napari
- Navigate napari GUI install plugins
- Jupyter notebooks for basic IA
- Apply new skills to real datasets w expert guidance

📅 Apply by NOW!
www.crick.ac.uk/whats-on/cbi...
CBIAS napari workshop 2025
www.crick.ac.uk
November 7, 2025 at 10:49 AM
A day in the dark side, from light to electron microscopy image analysis!

We're attending today the @ccp-volumeem.bsky.social meeting, discussing approaches to build a collaborative computational community for volume electron microscopy
November 3, 2025 at 12:58 PM
And it’s a wrap! Thanks to all attendees for your hard work in analysing bioimages with open source software to make science more reproducible. Best of luck for your image analysis adventures!
October 28, 2025 at 9:24 PM
All set up and ready to go for our 2-day Introduction to Image Analysis workshop for external attendees at @crick.ac.uk!

With Sara Salgueiro Torres, @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, @lankylaste.bsky.social and Cameron Shand
October 27, 2025 at 4:33 PM
Reposted by Crick Image Analysis Team
Want to automate workflows in #FIJI?
Don't know where to start?
We (@lankylaste.bsky.social, Alicja Skórkowska and Sara Salgueiro Torres) have added a step-by-step tutorial to the wiki to get you started.

Thanks @ctrue.bsky.social for adding!

imagej.github.io/tutorials/ba...
Batch Processing with the ImageJ Macro Language
The ImageJ wiki is a community-edited knowledge base on topics relating to ImageJ, a public domain program for processing and analyzing scientific images, and its ecosystem of derivatives and variants...
imagej.github.io
October 23, 2025 at 4:32 PM