Chris J. Maddison
@cmaddis.bsky.social
Reposted by Chris J. Maddison
Our friends in Pharmacology + Toxicology at the @uoftmedicine.bsky.social @uoft.bsky.social are looking for an assistant professor! The successful candidate will also become a member of the Acceleration Consortium. Apply now: jobs.utoronto.ca/job/Toronto-...
Assistant Professor - Pharmacology and Toxicology
Assistant Professor - Pharmacology and Toxicology
jobs.utoronto.ca
June 19, 2025 at 1:54 PM
Our friends in Pharmacology + Toxicology at the @uoftmedicine.bsky.social @uoft.bsky.social are looking for an assistant professor! The successful candidate will also become a member of the Acceleration Consortium. Apply now: jobs.utoronto.ca/job/Toronto-...
There's a very strong tendency to believe that the medical system has answers for the ailments that you or your loved ones will inevitably develop. Unfortunately, it's not true. The sooner we internalize that, the sooner we fix biotech.
January 2, 2025 at 8:55 PM
There's a very strong tendency to believe that the medical system has answers for the ailments that you or your loved ones will inevitably develop. Unfortunately, it's not true. The sooner we internalize that, the sooner we fix biotech.
Merry Christmas, friends and colleagues! I've written a short letter reflecting on our progress. Thank you for everything.
www.cs.toronto.edu/~cmaddis/let...
www.cs.toronto.edu/~cmaddis/let...
December 25, 2024 at 7:29 PM
Merry Christmas, friends and colleagues! I've written a short letter reflecting on our progress. Thank you for everything.
www.cs.toronto.edu/~cmaddis/let...
www.cs.toronto.edu/~cmaddis/let...
Reposted by Chris J. Maddison
We have done a similar feat for protein sequences @martaowesyou.bsky.social @cmaddis.bsky.social : www.biorxiv.org/content/10.1...
Boosting the Predictive Power of Protein Representations with a Corpus of Text Annotations
Protein language models are trained to predict amino acid sequences from vast protein databases, while learning to represent proteins as feature vectors. These vector representations have enabled impr...
www.biorxiv.org
December 24, 2024 at 1:25 PM
We have done a similar feat for protein sequences @martaowesyou.bsky.social @cmaddis.bsky.social : www.biorxiv.org/content/10.1...
Reposted by Chris J. Maddison
Fun polio fact: it is asymptomatic in 70% of cases.
In 29.5% of the cases symptoms do appear, they are gastrointestinal distress, normal enterovirus stuff.
Polio only displays neurological symptoms in 0.5% of cases.
You don't remember polio, you only remember *longpolio*
In 29.5% of the cases symptoms do appear, they are gastrointestinal distress, normal enterovirus stuff.
Polio only displays neurological symptoms in 0.5% of cases.
You don't remember polio, you only remember *longpolio*
December 14, 2024 at 7:45 PM
Fun polio fact: it is asymptomatic in 70% of cases.
In 29.5% of the cases symptoms do appear, they are gastrointestinal distress, normal enterovirus stuff.
Polio only displays neurological symptoms in 0.5% of cases.
You don't remember polio, you only remember *longpolio*
In 29.5% of the cases symptoms do appear, they are gastrointestinal distress, normal enterovirus stuff.
Polio only displays neurological symptoms in 0.5% of cases.
You don't remember polio, you only remember *longpolio*
Come visit us at 11am, West Ballroom A-D #5110. Target trial emulation with LLMs and social media data! 🎉📣
@nikitadhawan.bsky.social developed NATURAL (www.cs.toronto.edu/~nikita/natu...) with @cottascience.bsky.social , Karen & @cmaddis.bsky.social. Its an end-to-end pipeline that starts from raw-text data and ends with a causal (**) effect associated with an intervention.
(**) conditions apply
🧵(6/7)
(**) conditions apply
🧵(6/7)
NATURAL
www.cs.toronto.edu
December 12, 2024 at 6:19 PM
Come visit us at 11am, West Ballroom A-D #5110. Target trial emulation with LLMs and social media data! 🎉📣
Reposted by Chris J. Maddison
@nikitadhawan.bsky.social developed NATURAL (www.cs.toronto.edu/~nikita/natu...) with @cottascience.bsky.social , Karen & @cmaddis.bsky.social. Its an end-to-end pipeline that starts from raw-text data and ends with a causal (**) effect associated with an intervention.
(**) conditions apply
🧵(6/7)
(**) conditions apply
🧵(6/7)
NATURAL
www.cs.toronto.edu
December 11, 2024 at 12:20 AM
@nikitadhawan.bsky.social developed NATURAL (www.cs.toronto.edu/~nikita/natu...) with @cottascience.bsky.social , Karen & @cmaddis.bsky.social. Its an end-to-end pipeline that starts from raw-text data and ends with a causal (**) effect associated with an intervention.
(**) conditions apply
🧵(6/7)
(**) conditions apply
🧵(6/7)
I will be @neuripsconf.bsky.social next week (first time since 2019!). Please reach out if you'd like to connect.
December 2, 2024 at 2:04 PM
I will be @neuripsconf.bsky.social next week (first time since 2019!). Please reach out if you'd like to connect.
Reposted by Chris J. Maddison
Unless we hold reviewers and ACs accountable, especially ACs in this case, the acceptance of a paper will be determined by whether your paper got active or inactive reviewers/ac. This is even worse and more frustrating than the usual reviewer quality lottery.
✍️ Reminder to reviewers: Check author responses to your reviews, and ask follow up questions if needed.
50% of papers have discussion - let’s bring this number up!
50% of papers have discussion - let’s bring this number up!
November 28, 2024 at 2:29 PM
Unless we hold reviewers and ACs accountable, especially ACs in this case, the acceptance of a paper will be determined by whether your paper got active or inactive reviewers/ac. This is even worse and more frustrating than the usual reviewer quality lottery.
Why long COVID may simply be 'long infection'.
It is very important to make the message simple and optimistic: it seems that some people have long SARS-CoV-2 infections. We now know what we need to do.
www.abc.net.au/listen/progr...
It is very important to make the message simple and optimistic: it seems that some people have long SARS-CoV-2 infections. We now know what we need to do.
www.abc.net.au/listen/progr...
Why long COVID may simply be 'long infection' - ABC listen
A parliamentary inquiry found between two and twenty per cent of Australians who get the virus will develop symptoms of long COVID including brain fog and fatigue, but its exact causes remain a myster...
www.abc.net.au
November 28, 2024 at 3:31 AM
Why long COVID may simply be 'long infection'.
It is very important to make the message simple and optimistic: it seems that some people have long SARS-CoV-2 infections. We now know what we need to do.
www.abc.net.au/listen/progr...
It is very important to make the message simple and optimistic: it seems that some people have long SARS-CoV-2 infections. We now know what we need to do.
www.abc.net.au/listen/progr...
Really hope this platform succeeds because I have my preferred username.
November 19, 2024 at 11:13 PM
Really hope this platform succeeds because I have my preferred username.
Never going back to LaTeX tables and matplotlib scripts without Claude.
November 19, 2024 at 1:45 AM
Never going back to LaTeX tables and matplotlib scripts without Claude.
Reposted by Chris J. Maddison
A tale of two platforms:
BlueSky user numbers have hit a new record high in recent days, while the number of people deleting their accounts on X/Twitter has rocketed 🚀
BlueSky user numbers have hit a new record high in recent days, while the number of people deleting their accounts on X/Twitter has rocketed 🚀
November 13, 2024 at 11:21 AM
A tale of two platforms:
BlueSky user numbers have hit a new record high in recent days, while the number of people deleting their accounts on X/Twitter has rocketed 🚀
BlueSky user numbers have hit a new record high in recent days, while the number of people deleting their accounts on X/Twitter has rocketed 🚀
Reposted by Chris J. Maddison
I created a starter pack of faculty members / researchers at the University of Toronto from across academic disciplines, faculties, and campuses.
I tried to find as many as I could. Please let me know which additional colleagues to add.
go.bsky.app/GjLWXGA #UofT
I tried to find as many as I could. Please let me know which additional colleagues to add.
go.bsky.app/GjLWXGA #UofT
November 10, 2024 at 5:07 PM
I created a starter pack of faculty members / researchers at the University of Toronto from across academic disciplines, faculties, and campuses.
I tried to find as many as I could. Please let me know which additional colleagues to add.
go.bsky.app/GjLWXGA #UofT
I tried to find as many as I could. Please let me know which additional colleagues to add.
go.bsky.app/GjLWXGA #UofT
Reposted by Chris J. Maddison
