@blingbling-future.bsky.social
Reposted
🚀 PSOSP predicts #prophage induction!
From 49,333 genomes, we uncovered 11,806 SiPs, showing unique genomic/host traits and hinting at SiP–SdP interconversion.
onlinelibrary.wiley.com/doi/10.1002/...
Available: vee-lab.sjtu.edu.cn/PSOSP/
#Bioinformatics #microbiome
From 49,333 genomes, we uncovered 11,806 SiPs, showing unique genomic/host traits and hinting at SiP–SdP interconversion.
onlinelibrary.wiley.com/doi/10.1002/...
Available: vee-lab.sjtu.edu.cn/PSOSP/
#Bioinformatics #microbiome
PSOSP uncovers pervasive SOS‐independent prophages with distinct genomic and host traits in bacterial genomes
Prophages are ubiquitously present in bacterial genomes, significantly influencing host physiological and ecological functions. We present Prophage SOS-dependency Predictor (PSOSP), a novel bioinform...
onlinelibrary.wiley.com
September 11, 2025 at 3:12 PM
🚀 PSOSP predicts #prophage induction!
From 49,333 genomes, we uncovered 11,806 SiPs, showing unique genomic/host traits and hinting at SiP–SdP interconversion.
onlinelibrary.wiley.com/doi/10.1002/...
Available: vee-lab.sjtu.edu.cn/PSOSP/
#Bioinformatics #microbiome
From 49,333 genomes, we uncovered 11,806 SiPs, showing unique genomic/host traits and hinting at SiP–SdP interconversion.
onlinelibrary.wiley.com/doi/10.1002/...
Available: vee-lab.sjtu.edu.cn/PSOSP/
#Bioinformatics #microbiome
Reposted
🧪Struggling to induce #prophage?
🧬 Meet PSOSP, a tool to predict prophage induction mode!
🚀Distinguishes SOS-dependent vs independent prophages.
🖥️Available on web server: vee-lab.sjtu.edu.cn/PSOSP and Github: github.com/mujiezhang/P...
#Bioinformatics #phage #viruse #microbiome #GutHealth
🧬 Meet PSOSP, a tool to predict prophage induction mode!
🚀Distinguishes SOS-dependent vs independent prophages.
🖥️Available on web server: vee-lab.sjtu.edu.cn/PSOSP and Github: github.com/mujiezhang/P...
#Bioinformatics #phage #viruse #microbiome #GutHealth
GitHub - mujiezhang/PSOSP: PSOSP (Prophage SOS dependency Predictor) is a novel bioinformatics tool to predict prophage induction modes by analyzing the heterology index (HI) of LexA protein binding t...
PSOSP (Prophage SOS dependency Predictor) is a novel bioinformatics tool to predict prophage induction modes by analyzing the heterology index (HI) of LexA protein binding to target DNA, classifyin...
github.com
July 27, 2025 at 1:05 PM
🧪Struggling to induce #prophage?
🧬 Meet PSOSP, a tool to predict prophage induction mode!
🚀Distinguishes SOS-dependent vs independent prophages.
🖥️Available on web server: vee-lab.sjtu.edu.cn/PSOSP and Github: github.com/mujiezhang/P...
#Bioinformatics #phage #viruse #microbiome #GutHealth
🧬 Meet PSOSP, a tool to predict prophage induction mode!
🚀Distinguishes SOS-dependent vs independent prophages.
🖥️Available on web server: vee-lab.sjtu.edu.cn/PSOSP and Github: github.com/mujiezhang/P...
#Bioinformatics #phage #viruse #microbiome #GutHealth