Azusa Kage
@azusakage.bsky.social
Gravitational biologist, 助教 (PI) in Muroran, Hokkaido, Japan. Studying motility and behavior of microorganisms.
bioconvection / gravitaxis / eukaryotic flagella / cilia / low Reynolds number / Chlamydomonas♉️ / Volvocales / Paramecium / protists🦠 / Python
bioconvection / gravitaxis / eukaryotic flagella / cilia / low Reynolds number / Chlamydomonas♉️ / Volvocales / Paramecium / protists🦠 / Python
Here is our set of videos capturing eukaryotic flagellar motion at 200 fps, including 46 live cells and 56 demembranated models of the Chlamydomonas uniflagellate mutant. #protistsonsky
zenodo.org/records/1509...
zenodo.org/records/1509...
Data for "Revealing Rotational Characteristics of the Uniflagellate Mutant of Chlamydomonas reinhardtii through DeepLabCut-Based Autotracking"
Data for "Revealing Rotational Characteristics of the Uniflagellate Mutant of Chlamydomonas reinhardtii through DeepLabCut-Based Autotracking," microPublication Biology 10.17912/micropub.biology.00153...
zenodo.org
May 7, 2025 at 12:24 PM
Here is our set of videos capturing eukaryotic flagellar motion at 200 fps, including 46 live cells and 56 demembranated models of the Chlamydomonas uniflagellate mutant. #protistsonsky
zenodo.org/records/1509...
zenodo.org/records/1509...
All video data (~100 individuals, both live cells and demembranated models) are available on Zenodo, so feel free to explore and reuse!
zenodo.org/records/1509...
#protistsonsky
zenodo.org/records/1509...
#protistsonsky
Data for "Revealing Rotational Characteristics of the Uniflagellate Mutant of Chlamydomonas reinhardtii through DeepLabCut-Based Autotracking"
Data for "Revealing Rotational Characteristics of the Uniflagellate Mutant of Chlamydomonas reinhardtii through DeepLabCut-Based Autotracking," microPublication Biology 10.17912/micropub.biology.00153...
zenodo.org
April 22, 2025 at 12:01 PM
All video data (~100 individuals, both live cells and demembranated models) are available on Zenodo, so feel free to explore and reuse!
zenodo.org/records/1509...
#protistsonsky
zenodo.org/records/1509...
#protistsonsky
Interesting. I’m not very familiar with Alphafold, so I didn’t know that.
January 22, 2025 at 11:01 AM
Interesting. I’m not very familiar with Alphafold, so I didn’t know that.
Reposted by Azusa Kage
It’s interesting that all versions of Alphafold distort large extended proteins to ‘globularise’ them. It’s fine for people that understand those helices are ‘bent’ but for non experts it’s confusing. 🫤 🤔 It happens a lot and isn’t well discussed in the community.
January 21, 2025 at 9:50 PM
It’s interesting that all versions of Alphafold distort large extended proteins to ‘globularise’ them. It’s fine for people that understand those helices are ‘bent’ but for non experts it’s confusing. 🫤 🤔 It happens a lot and isn’t well discussed in the community.