alisandra-denton.bsky.social
@alisandra-denton.bsky.social
Just finished playing 20th century food court. Delightful game. Neverwas so proud of making a soup.
December 29, 2025 at 5:06 AM
Reposted
AI model Helixer predicts eukaryotic genes ab initio, directly from a plain text FASTA file.

No RNA-seq.
No protein homology.
No repeats, hints, or curated evidence.

Raw genome → accurate gene models.
Deep learning + HMM, published in @natmethods.nature.com

www.nature.com/articles/s41...
Helixer: ab initio prediction of primary eukaryotic gene models combining deep learning and a hidden Markov model - Nature Methods
By leveraging both deep learning and hidden Markov models, Helixer achieves broad taxonomic coverage for ab initio gene annotation of eukaryotic genomes from fungi, plants, vertebrates and invertebrat...
www.nature.com
November 26, 2025 at 6:00 AM
Reposted
1/ Valence Labs is bringing together next generation of Montréal researchers and innovators in Bio-AI.

We are hosting a Bio-AI Show & Tell — a quick and fun showcase of ideas, demos and projects in ML.

RSVP here: luma.com/n47bshdx
October 29, 2025 at 1:40 PM
Hello world
May 23, 2025 at 2:47 AM