Felling inspired after my visit to The Broad Institute. Brilliant science in a collaborative energised environment. Thanks @azizalkhafaji.bsky.social and Gammy Al-Eryani for hosting

An exciting new paper on the application of federated deep learning to pan-cancer proteomic data. Congrats to the Procan team for this achievement! Very happy to have contributed our breast cancer dataset to this important work.

doi.org/10.1158/2159...
www.cmrijeansforgenes.org.au/research/res...

Today is the last day in the lab for for Marion Motard, who joined the lab for her Masters then stayed on as a research assistant. She did brilliant work on GNNs to predict gene module enrichment in histology images. She is returning to Europe, quickly offer her a job in ML/computational !

I had a great time at the #wehispatial25 meeting. So much excellent spatial ‘omics going on in Oz.
But weware the @wehi rubber chicken

#aacr2025 Here we go…

I'm chairing session ED52 "Innovative Approaches in TME Biology: From Profiling to Function" at #AACR2025. I'll present data using cellular and functional genomics to identify small molecule mediators of stromal plasticity. Also the amazing Illaria Malanchi and Nick Navin. LMK if u will be there!

We recently released a new preprint on human localised prostate cancer biology. We used scRNA-Seq and spatial transcriptomics to dig deep into epithelial plasticity and stromal biology
Led by Eva Apostolov

www.biorxiv.org/content/10.1...