Alex Peltzer
@alexpeltzer.bsky.social
Clinical Bioinformatics @boehringer with interests in NGS, cloud, @nf_core , cancer & immunology. Tweets are my own. @alex_peltzer@genomic.social
Reposted by Alex Peltzer
It would be nice if this kind of new evidence, consisting of actual data that continues to add support to the zoonotic hypothesis, was reported by the lay press at least as enthusiastically as their unsubstantiated rumors about what “the CIA now believes”, etc…. I’m not holding my breath, though.
An updated dataset of early SARS-CoV-2 diversity supports a wildlife market origin https://www.biorxiv.org/content/10.1101/2025.04.05.647275v1
April 8, 2025 at 4:29 AM
It would be nice if this kind of new evidence, consisting of actual data that continues to add support to the zoonotic hypothesis, was reported by the lay press at least as enthusiastically as their unsubstantiated rumors about what “the CIA now believes”, etc…. I’m not holding my breath, though.
Finally did it and got rid of that X account. Science is here anyway, don’t care about the spam, bots or propaganda.
April 4, 2025 at 6:16 PM
Finally did it and got rid of that X account. Science is here anyway, don’t care about the spam, bots or propaganda.
Reposted by Alex Peltzer
Instead of valentines this year, I’m sending copies of this tiny little book to family and friends. If you have not read it, get two copies today— one to keep and one to give.
The first lesson: Do not obey in advance.
The second: Defend institutions.
It could not be more relevant.
The first lesson: Do not obey in advance.
The second: Defend institutions.
It could not be more relevant.
February 8, 2025 at 11:12 PM
Instead of valentines this year, I’m sending copies of this tiny little book to family and friends. If you have not read it, get two copies today— one to keep and one to give.
The first lesson: Do not obey in advance.
The second: Defend institutions.
It could not be more relevant.
The first lesson: Do not obey in advance.
The second: Defend institutions.
It could not be more relevant.
Reposted by Alex Peltzer
If you want to learn more, I'll be presenting this at a @nf-co.re bytesize talk: nf-co.re/events/2025/...
Bytesize: data science operations (DSO)
Gregor Sturm, Boehringer Ingelheim
nf-co.re
February 5, 2025 at 6:32 PM
If you want to learn more, I'll be presenting this at a @nf-co.re bytesize talk: nf-co.re/events/2025/...
Reposted by Alex Peltzer
I'd like to share DSO, a command line helper to build reproducible data science projects with ease.
It is an opinionated way to organize data science projects, built around data version control (DVC).
github.com/Boehringer-I...
It is an opinionated way to organize data science projects, built around data version control (DVC).
github.com/Boehringer-I...
GitHub - Boehringer-Ingelheim/dso: Data Science Operations (dso) command line tool
Data Science Operations (dso) command line tool. Contribute to Boehringer-Ingelheim/dso development by creating an account on GitHub.
github.com
February 5, 2025 at 6:32 PM
I'd like to share DSO, a command line helper to build reproducible data science projects with ease.
It is an opinionated way to organize data science projects, built around data version control (DVC).
github.com/Boehringer-I...
It is an opinionated way to organize data science projects, built around data version control (DVC).
github.com/Boehringer-I...
Reposted by Alex Peltzer
Data showing the top 16% of remote workers outperform the top 5% in-office, while the bottom 12% underperform the bottom 5% in-office, makes sense.
Top performers thrive with extra time from no commute, but underperformers struggle without oversight. RTO penalizes top talent for others’ inability.
Top performers thrive with extra time from no commute, but underperformers struggle without oversight. RTO penalizes top talent for others’ inability.
November 28, 2024 at 9:16 PM
Data showing the top 16% of remote workers outperform the top 5% in-office, while the bottom 12% underperform the bottom 5% in-office, makes sense.
Top performers thrive with extra time from no commute, but underperformers struggle without oversight. RTO penalizes top talent for others’ inability.
Top performers thrive with extra time from no commute, but underperformers struggle without oversight. RTO penalizes top talent for others’ inability.
Finally started a new blog that I intend to occasionally post to - first posting about a small home assistant project - see here: alexpeltzer.substack.com/p/automating...
November 26, 2024 at 12:16 AM
Finally started a new blog that I intend to occasionally post to - first posting about a small home assistant project - see here: alexpeltzer.substack.com/p/automating...
Reposted by Alex Peltzer
Bluesky for Science
Starter packs for genomics, bioinformatics, #Rstats, Nextflow. Moderation lists. Feeds. Let's rebuild the old scitwitter community and keep this place nice
blog.stephenturner.us/p/bluesky-fo... 🧬🖥️🧪
Starter packs for genomics, bioinformatics, #Rstats, Nextflow. Moderation lists. Feeds. Let's rebuild the old scitwitter community and keep this place nice
blog.stephenturner.us/p/bluesky-fo... 🧬🖥️🧪
Bluesky for Science
Bluesky starter packs for genomics, bioinformatics, R, and Nextflow
blog.stephenturner.us
November 16, 2024 at 10:25 AM
Bluesky for Science
Starter packs for genomics, bioinformatics, #Rstats, Nextflow. Moderation lists. Feeds. Let's rebuild the old scitwitter community and keep this place nice
blog.stephenturner.us/p/bluesky-fo... 🧬🖥️🧪
Starter packs for genomics, bioinformatics, #Rstats, Nextflow. Moderation lists. Feeds. Let's rebuild the old scitwitter community and keep this place nice
blog.stephenturner.us/p/bluesky-fo... 🧬🖥️🧪
Looks like this is the new place to be. Glad that it finally seems to fill with people 🙌👍
November 14, 2024 at 2:38 PM
Looks like this is the new place to be. Glad that it finally seems to fill with people 🙌👍
Reposted by Alex Peltzer
Pipeline release! nf-core/airrflow v3.2.0 - nf-core/airrflow version 3.2.0 "Expecto patronum"!
Please see the changelog: https://github.com/nf-core/airrflow/releases/tag/3.2.0
Please see the changelog: https://github.com/nf-core/airrflow/releases/tag/3.2.0
October 27, 2023 at 1:24 PM
Pipeline release! nf-core/airrflow v3.2.0 - nf-core/airrflow version 3.2.0 "Expecto patronum"!
Please see the changelog: https://github.com/nf-core/airrflow/releases/tag/3.2.0
Please see the changelog: https://github.com/nf-core/airrflow/releases/tag/3.2.0
Reposted by Alex Peltzer
Pipeline release! nf-core/smrnaseq v2.2.4 - v2.2.4 - 2023-11-03 Carmine Mercury Borzoi!
Please see the changelog: https://github.com/nf-core/smrnaseq/releases/tag/2.2.4
Please see the changelog: https://github.com/nf-core/smrnaseq/releases/tag/2.2.4
November 3, 2023 at 7:29 PM
Pipeline release! nf-core/smrnaseq v2.2.4 - v2.2.4 - 2023-11-03 Carmine Mercury Borzoi!
Please see the changelog: https://github.com/nf-core/smrnaseq/releases/tag/2.2.4
Please see the changelog: https://github.com/nf-core/smrnaseq/releases/tag/2.2.4