alex jaffe
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alexjaf.bsky.social
alex jaffe
@alexjaf.bsky.social
(marine) microbial ecology + evolution | stanford postdoc | he/him/his
while i AM looking forward to (someday) trivially assembling single contig MAGs from long-read data... picking out coherent contig clusters in #anvio will always be very satisfying!
September 24, 2025 at 5:06 AM
one other quick question for you - seeing lots of otu coverage vals with 0.31 decimal increments - expected behavior? if so, related to default kmer len?
July 23, 2025 at 9:48 PM
amidst the horrors, a rejuvenating day in the field with @mlmlsci.bsky.social . thanks to the crew of the r/v jh martin!
March 2, 2025 at 4:35 AM
a first try at something new - tips/tricks/superstitions, especially from those working with environmental samples, very welcome ! @nanoporetech.com
February 3, 2025 at 9:54 PM
calling all western geobiologists, broadly construed! come join us for the third iteration of this great little symposium, by and for early career scientists
January 17, 2025 at 8:54 PM
mobile genetic elements within mobile genetic elements ? 🤯 congrats to @luisvalentin.bsky.social et al on this exciting set of findings in a novel lineage of asgardarchaea
March 25, 2024 at 7:30 PM
happy to share this 'quick guide' to the Candidate Phyla Radiation bacteria out today in @currentbiology.bsky.social!

its purpose is to be a plain language summary of all the great recent work in this space, with a few key papers for reference.

www.cell.com/current-biol...
February 5, 2024 at 10:26 PM