Vera van Noort
@veravannoort.bsky.social
Professor Computational Biology at KU Leuven and Leiden University
Proteins, Peptides, PTMs, microbes, phages, enzymes
Proteins, Peptides, PTMs, microbes, phages, enzymes
Reposted by Vera van Noort
Fold first, ask later: structure-informed function annotation of Pseudomonas phage proteins
Structural predictions to improve #phage genome annotation!
@hannelorelongin.bsky.social @gbouras13.bsky.social y.social @susiegriggo.bsky.social @veravannoort.bsky.social
www.biorxiv.org/content/10.1...
Structural predictions to improve #phage genome annotation!
@hannelorelongin.bsky.social @gbouras13.bsky.social y.social @susiegriggo.bsky.social @veravannoort.bsky.social
www.biorxiv.org/content/10.1...
Fold first, ask later: structure-informed function annotation of Pseudomonas phage proteins
Phages, the viruses of bacteria, harbor an incredibly diverse repertoire of proteins capable of manipulating their bacterial hosts, inspiring many medical and biotechnological applications. However, t...
www.biorxiv.org
July 22, 2025 at 12:27 AM
Fold first, ask later: structure-informed function annotation of Pseudomonas phage proteins
Structural predictions to improve #phage genome annotation!
@hannelorelongin.bsky.social @gbouras13.bsky.social y.social @susiegriggo.bsky.social @veravannoort.bsky.social
www.biorxiv.org/content/10.1...
Structural predictions to improve #phage genome annotation!
@hannelorelongin.bsky.social @gbouras13.bsky.social y.social @susiegriggo.bsky.social @veravannoort.bsky.social
www.biorxiv.org/content/10.1...
Reposted by Vera van Noort
Very excited that our work describing hu.MAP3.0 is published in @molsystbiol.org. Here we use machine learning to integrate >25k mass spectrometry experiments to place ~70% of human proteins into 15k protein complexes.
www.embopress.org/doi/full/10....
www.embopress.org/doi/full/10....
hu.MAP3.0: atlas of human protein complexes by integration of >25,000 proteomic experiments | Molecular Systems Biology
imageimagehu.MAP3.0 integrates mass spectrometry experiments to identify human protein complexes.
Using this resource, this study characterizes covariation of complexes, identifies
mutually exclusive ...
www.embopress.org
May 29, 2025 at 11:24 PM
Very excited that our work describing hu.MAP3.0 is published in @molsystbiol.org. Here we use machine learning to integrate >25k mass spectrometry experiments to place ~70% of human proteins into 15k protein complexes.
www.embopress.org/doi/full/10....
www.embopress.org/doi/full/10....
Looking for a new colleague at the faculty of bioscience engineering www.biw.kuleuven.be/m2s/cmpg/job...
Research Professorship in microbial systems biology, synthetic biology and/or protein engineering
www.biw.kuleuven.be
May 21, 2025 at 1:53 PM
Looking for a new colleague at the faculty of bioscience engineering www.biw.kuleuven.be/m2s/cmpg/job...
Kregen andere promotoren ook bericht dat ze hun aanbeveling bij @fwovlaanderen.bsky.social niet hadden ingediend terwijl ze dit wel hadden gedaan? #onnodigestress
May 16, 2025 at 8:19 AM
Kregen andere promotoren ook bericht dat ze hun aanbeveling bij @fwovlaanderen.bsky.social niet hadden ingediend terwijl ze dit wel hadden gedaan? #onnodigestress
Check out our preprint on optimal growth temperature prediction #machinelearning #ai #bioprospecting #extremophiles
Machine learning for optimal growth temperature prediction of prokaryotes using amino acid descriptors https://www.biorxiv.org/content/10.1101/2025.03.03.640802v1
March 4, 2025 at 6:27 AM
Check out our preprint on optimal growth temperature prediction #machinelearning #ai #bioprospecting #extremophiles
Reposted by Vera van Noort
A new #StarterPack with scientist specialized in microbial bioinformatics - #MicroBioInf.
Please comment if you would like to be added: go.bsky.app/5h7VaGm
Looking forward to the discussions!
Please comment if you would like to be added: go.bsky.app/5h7VaGm
Looking forward to the discussions!
December 15, 2024 at 9:22 AM
A new #StarterPack with scientist specialized in microbial bioinformatics - #MicroBioInf.
Please comment if you would like to be added: go.bsky.app/5h7VaGm
Looking forward to the discussions!
Please comment if you would like to be added: go.bsky.app/5h7VaGm
Looking forward to the discussions!
Positive vibes among the master students presenting results of their hard work this semester at the poster session of the Integrated Bioinformatics Project at KU Leuven.
December 17, 2024 at 10:11 AM
Positive vibes among the master students presenting results of their hard work this semester at the poster session of the Integrated Bioinformatics Project at KU Leuven.
Early xmas present, now out in Bioinformatics. SCARAP developed by Stijn Wittouck in collaboration with Sarah Lebeer. PanGenome analysis brought to your laptop academic.oup.com/bioinformati...
SCARAP: scalable cross-species comparative genomics of prokaryotes
AbstractMotivation. Much of prokaryotic comparative genomics currently relies on two critical computational tasks: pangenome inference and core genome infe
academic.oup.com
December 17, 2024 at 8:42 AM
Early xmas present, now out in Bioinformatics. SCARAP developed by Stijn Wittouck in collaboration with Sarah Lebeer. PanGenome analysis brought to your laptop academic.oup.com/bioinformati...
Reposted by Vera van Noort
Structure of the Pseudomonas aeruginosa PAO1 Type IV pilus
Finally out in PLOS Pathogens. Congrats Hannah Ochner and co-authors. @mrclmb.bsky.social
journals.plos.org/plospathogen...
Finally out in PLOS Pathogens. Congrats Hannah Ochner and co-authors. @mrclmb.bsky.social
journals.plos.org/plospathogen...
December 16, 2024 at 3:53 PM
Structure of the Pseudomonas aeruginosa PAO1 Type IV pilus
Finally out in PLOS Pathogens. Congrats Hannah Ochner and co-authors. @mrclmb.bsky.social
journals.plos.org/plospathogen...
Finally out in PLOS Pathogens. Congrats Hannah Ochner and co-authors. @mrclmb.bsky.social
journals.plos.org/plospathogen...
Small rant. Funding rejected again. Quoting the reviewers "very ambitiius and original", "innovative" but "concerns .. about expertise". This semester, I started on the initial phase of this project nevertheless with a group of Master students and superhappy with results so far! (1/n)
December 13, 2024 at 2:14 PM
Small rant. Funding rejected again. Quoting the reviewers "very ambitiius and original", "innovative" but "concerns .. about expertise". This semester, I started on the initial phase of this project nevertheless with a group of Master students and superhappy with results so far! (1/n)
Reposted by Vera van Noort
In our ab initio modeling group at imec we have two new PhD positions open
www.imec-int.com/en/work-at-i...
www.imec-int.com/en/work-at-i...
application deadline is December 15th.
www.imec-int.com/en/work-at-i...
www.imec-int.com/en/work-at-i...
application deadline is December 15th.
December 10, 2024 at 9:39 AM
In our ab initio modeling group at imec we have two new PhD positions open
www.imec-int.com/en/work-at-i...
www.imec-int.com/en/work-at-i...
application deadline is December 15th.
www.imec-int.com/en/work-at-i...
www.imec-int.com/en/work-at-i...
application deadline is December 15th.